Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YFL008W
Length:
1225
Number of sequences:
5887
Description:
YFL008W SMC1 SGDID:S000001886, Chr VI from 119429-123106, Genome Release 64-1-1, Verified ORF, "Subunit of the multiprotein cohesin complex, essential protein involved in chromosome segregation and in double-strand DNA break repair; SMC chromosomal ATPase family member, binds DNA with a preference for DNA with secondary structure"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
121Q60902    907   EP15R_MOUSE Epidermal growth factor receptor ...1870.62     38.1     25     48GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006897; P:endocytosis; IEA:UniProtKB-KW.
122A4X0U0    377   RECF_SALTO DNA replication and repair protein...550.64     37.7     35     64GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
123Q2RYF0    233   CCMA_RHORT Cytochrome c biogenesis ATP-bindin...1080.65     37     32     43GO:0030288; C:outer membrane-bounded periplasmic space; IEA:InterPro.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0015439; F:heme-transporting ATPase activity; IEA:EC.
GO:0017004; P:cytochrome complex assembly; IEA:UniProtKB-KW.
124B2S2U7    428   PROA_TREPS Gamma-glutamyl phosphate reductase...1320.66     37.7     24     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004350; F:glutamate-5-semialdehyde dehydrogenase activity; IEA:EC.::GO:0050661; F:NADP binding; IEA:InterPro.
GO:0006561; P:proline biosynthetic process; IEA:UniProtKB-KW.
125P74935    428   PROA_TREPA Gamma-glutamyl phosphate reductase...1320.66     37.7     24     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004350; F:glutamate-5-semialdehyde dehydrogenase activity; IEA:EC.::GO:0050661; F:NADP binding; IEA:InterPro.
GO:0006561; P:proline biosynthetic process; IEA:UniProtKB-KW.
126Q9HWB8    1211   SBCC_PSEAE Nuclease sbcCD subunit C OS=12228)...1000.67     38.1     27     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
127B7KID4    384   RECF_CYAP7 DNA replication and repair protein...630.84     37.4     33     63GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
128P21854    359   CD72_HUMAN B-cell differentiation antigen CD7...705.5     34.7     23     56GO:0005887; C:integral to plasma membrane; IDA:UniProtKB.
GO:0005102; F:receptor binding; TAS:ProtInc.::GO:0004888; F:transmembrane signaling receptor activity; NAS:UniProtKB.
GO:0007411; P:axon guidance; TAS:Reactome.::GO:0007155; P:cell adhesion; TAS:ProtInc.
129O67124    978   RAD50_AQUAE Probable DNA double-strand break ...480.97     37.4     33     56
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
130A4IJ87    372   RECF_GEOTN DNA replication and repair protein...630.99     37     40     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
131O29230    886   RAD50_ARCFU DNA double-strand break repair Ra...3411.1     37.4     23     44
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
132B0TAL0    372   RECF_HELMI DNA replication and repair protein...461.1     37     35     67GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
133B2G4Y8    374   RECF_LACRJ DNA replication and repair protein...571.1     37     39     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
134A5VHF6    374   RECF_LACRD DNA replication and repair protein...571.1     37     39     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
135Q9CE70    358   RECF_LACLA DNA replication and repair protein...641.2     36.6     36     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
136B1VPF3    376   RECF_STRGG DNA replication and repair protein...541.2     36.6     33     67GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
137Q9UBC2    864   EP15R_HUMAN Epidermal growth factor receptor ...1811.3     37     24     49GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; TAS:Reactome.
GO:0005509; F:calcium ion binding; IEA:InterPro.
GO:0006897; P:endocytosis; IEA:UniProtKB-KW.::GO:0007173; P:epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0042059; P:negative regulation of epidermal growth factor receptor signaling pathway; TAS:Reactome.
138A1R0S5    399   RECF_ARTAT DNA replication and repair protein...551.3     36.6     36     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
139P42423    257   YXDL_BACSU ABC transporter ATP-binding protei...381.3     36.2     37     71
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.
GO:0006810; P:transport; IEA:UniProtKB-KW.
140O06714    1130   SBCC_BACSU Nuclease sbcCD subunit C OS=Bacill...421.3     37     33     57
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
141Q2RMJ4    370   RECF_MOOTA DNA replication and repair protein...971.5     36.6     29     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
142Q87SV4    234   THIQ_VIBPA Thiamine import ATP-binding protei...1051.5     35.8     30     49GO:0009276; C:Gram-negative-bacterium-type cell wall; IEA:InterPro.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0042626; F:ATPase activity, coupled to transmembrane movement of substances; IEA:InterPro.
143Q02WH8    359   RECF_LACLS DNA replication and repair protein...641.6     36.2     36     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
144A2RNA8    359   RECF_LACLM DNA replication and repair protein...641.6     36.2     36     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
145Q8CUY0    254   PHNC2_OCEIH Phosphonates import ATP-binding p...481.7     35.8     44     58GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0015416; F:organic phosphonate transmembrane-transporting ATPase activity; IEA:EC.
146Q8PUY4    1070   RAD50_METMA DNA double-strand break repair Ra...711.8     36.6     34     58
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
147P22839    362   RECF_PROMI DNA replication and repair protein...1941.8     36.2     25     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
148B4F0U7    362   RECF_PROMH DNA replication and repair protein...1941.8     36.2     25     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
149Q97WH0    864   RAD50_SULSO DNA double-strand break repair Ra...582.1     36.2     38     53
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
150Q97FK1    1163   SBCC_CLOAB Nuclease sbcCD subunit C OS=5710 /...1051.9     36.6     30     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
151Q7MQJ5    359   RECF_VIBVY DNA replication and repair protein...2601.9     36.2     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
records
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