Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YFL003C
Length:
878
Number of sequences:
5887
Description:
YFL003C MSH4 SGDID:S000001891, Chr VI from 137157-134521, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein involved in meiotic recombination, required for normal levels of crossing over, colocalizes with Zip2p to discrete foci on meiotic chromosomes, has homology to bacterial MutS protein"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P40965    878   MSH4_YEAST MutS protein homolog 4 OS=Saccharo...8780     1799     100     100GO:0000795; C:synaptonemal complex; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0051026; P:chiasma assembly; IBA:RefGenome.::GO:0045143; P:homologous chromosome segregation; IBA:RefGenome.::GO:0006298; P:mismatch repair; IEA:InterPro.::GO:0007131; P:reciprocal meiotic recombination; IMP:SGD.
2O94065    803   MSH4_CANAX MutS protein homolog 4 OS=Candida ...7112e-138     438     36     60
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0006298; P:mismatch repair; IEA:InterPro.
3O15457    936   MSH4_HUMAN MutS protein homolog 4 OS=Homo sap...7576e-98     333     32     55GO:0000795; C:synaptonemal complex; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.
GO:0051026; P:chiasma assembly; IBA:RefGenome.::GO:0045143; P:homologous chromosome segregation; IBA:RefGenome.::GO:0006298; P:mismatch repair; IEA:InterPro.::GO:0007131; P:reciprocal meiotic recombination; IBA:RefGenome.
4Q99MT2    958   MSH4_MOUSE MutS protein homolog 4 OS=Mus musc...8417e-95     325     30     53GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000795; C:synaptonemal complex; IDA:MGI.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.
GO:0051026; P:chiasma assembly; IBA:RefGenome.::GO:0007292; P:female gamete generation; IMP:MGI.::GO:0045143; P:homologous chromosome segregation; IBA:RefGenome.::GO:0006298; P:mismatch repair; IEA:InterPro.::GO:0001541; P:ovarian follicle development; IMP:MGI.::GO:0007131; P:reciprocal meiotic recombination; IBA:RefGenome.::GO:0007283; P:spermatogenesis; IMP:MGI.
5Q23405    842   HIM14_CAEEL MutS protein homolog him-14 OS=Ca...6804e-59     220     29     49GO:0000795; C:synaptonemal complex; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0051026; P:chiasma assembly; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0051729; P:germline cell cycle switching, mitotic to meiotic cell cycle; IMP:WormBase.::GO:0045143; P:homologous chromosome segregation; IMP:WormBase.::GO:0006298; P:mismatch repair; IEA:InterPro.::GO:0000239; P:pachytene; IMP:UniProtKB.::GO:0000712; P:resolution of meiotic recombination intermediates; IMP:UniProtKB.
6Q8RA71    869   MUTS_THETN DNA mismatch repair protein MutS O...6654e-57     214     28     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
7B2S2S5    900   MUTS_TREPS DNA mismatch repair protein MutS O...7796e-56     211     26     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
8O83348    900   MUTS_TREPA DNA mismatch repair protein MutS O...7796e-56     211     26     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
9A4XL47    863   MUTS_CALS8 DNA mismatch repair protein MutS O...6771e-55     210     28     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
10Q12VC9    887   MUTS_METBU DNA mismatch repair protein MutS O...6594e-55     209     27     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
11B9MJU0    863   MUTS_ANATD DNA mismatch repair protein MutS O...6773e-54     206     28     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
12Q8PWA7    900   MUTS_METMA DNA mismatch repair protein MutS O...6612e-53     204     27     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
13A5ILG0    793   MUTS_THEP1 DNA mismatch repair protein MutS O...5575e-53     201     29     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
14B1KPS7    858   MUTS_SHEWM DNA mismatch repair protein MutS O...7511e-52     201     26     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
15P74926    793   MUTS_THEMA DNA mismatch repair protein MutS O...5573e-52     199     29     49GO:0032300; C:mismatch repair complex; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003684; F:damaged DNA binding; IBA:RefGenome.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.
GO:0006298; P:mismatch repair; IBA:RefGenome.
16B1LAW3    793   MUTS_THESQ DNA mismatch repair protein MutS O...5575e-52     198     29     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
17Q46CE2    900   MUTS_METBF DNA mismatch repair protein MutS O...6571e-51     198     27     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
18A5FJ63    868   MUTS_FLAJ1 DNA mismatch repair protein MutS O...7002e-51     198     26     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
19Q8TTB4    900   MUTS_METAC DNA mismatch repair protein MutS O...6572e-51     197     27     50GO:0032300; C:mismatch repair complex; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003684; F:damaged DNA binding; IBA:RefGenome.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.
GO:0006298; P:mismatch repair; IBA:RefGenome.
20C0QFS1    895   MUTS_DESAH DNA mismatch repair protein MutS O...5942e-50     195     29     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
21A6TR79    880   MUTS_ALKMQ DNA mismatch repair protein MutS O...5492e-50     195     29     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
22B9DW73    847   MUTS_STRU0 DNA mismatch repair protein MutS O...5352e-50     194     29     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
23A3DDI3    870   MUTS_CLOTH DNA mismatch repair protein MutS O...6563e-50     194     26     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
24Q18FJ9    932   MUTS_HALWD DNA mismatch repair protein MutS O...6032e-49     192     27     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
25P61672    891   MUTS_TREDE DNA mismatch repair protein MutS O...6622e-49     192     27     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
26Q0AYB5    859   MUTS_SYNWW DNA mismatch repair protein MutS O...6552e-49     191     27     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
27B3E6P2    872   MUTS_GEOLS DNA mismatch repair protein MutS O...6664e-49     191     27     46
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
28B9K800    801   MUTS_THENN DNA mismatch repair protein MutS O...6487e-49     189     27     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
29Q3IUH3    856   MUTS_NATPD DNA mismatch repair protein MutS O...5629e-49     189     27     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
30O66652    859   MUTS_AQUAE DNA mismatch repair protein MutS O...5643e-48     188     29     50GO:0032300; C:mismatch repair complex; IBA:RefGenome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003684; F:damaged DNA binding; IBA:RefGenome.::GO:0008094; F:DNA-dependent ATPase activity; IBA:RefGenome.::GO:0030983; F:mismatched DNA binding; IBA:RefGenome.
GO:0006298; P:mismatch repair; IBA:RefGenome.
31A6LLR1    819   MUTS_THEM4 DNA mismatch repair protein MutS O...5586e-48     187     28     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
records
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