Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YER190W
Length:
1681
Number of sequences:
5887
Description:
YER190W YRF1-2 SGDID:S000000992, Chr V from 571480-576525, Genome Release 64-1-1, Verified ORF, "Helicase encoded by the Y' element of subtelomeric regions, highly expressed in the mutants lacking the telomerase component TLC1; potentially phosphorylated by Cdc28p; induced by treatment with 8-methoxypsoralen and UVA irradiation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
631Q4PFD9    1156   PRP5_USTMA Pre-mRNA-processing ATP-dependent ...1128.2     35     23     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
632Q9HGM5    453   DBP8_SCHPO ATP-dependent RNA helicase dbp8 OS...1178.4     34.7     25     44GO:0005730; C:nucleolus; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:PomBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; ISS:PomBase.
633B0RES6    688   UVRB_CLAMS UvrABC system protein B OS=9667). ...1258.6     34.7     26     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
634P49686    430   NUP42_YEAST Nucleoporin NUP42 OS=Saccharomyce...1888.6     34.7     21     42GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0031990; P:mRNA export from nucleus in response to heat stress; IMP:SGD.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IGI:SGD.::GO:0000973; P:posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery; IMP:SGD.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
635A3Q9R3    435   RHLB_SHELP ATP-dependent RNA helicase rhlB OS...1128.7     34.7     26     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
636A8GZJ0    436   RHLB_SHEPA ATP-dependent RNA helicase rhlB OS...1138.8     34.7     26     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
637Q61089    709   FZD6_MOUSE Frizzled-6 OS=Mus musculus (Mouse)...1598.9     34.7     23     39GO:0045177; C:apical part of cell; IDA:MGI.::GO:0016327; C:apicolateral plasma membrane; IDA:MGI.::GO:0005737; C:cytoplasm; IBA:RefGenome.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0032589; C:neuron projection membrane; IBA:RefGenome.
GO:0004930; F:G-protein coupled receptor activity; IEA:UniProtKB-KW.::GO:0030165; F:PDZ domain binding; IBA:RefGenome.::GO:0042813; F:Wnt-activated receptor activity; IBA:RefGenome.::GO:0017147; F:Wnt-protein binding; IPI:BHF-UCL.
GO:0001525; P:angiogenesis; IBA:RefGenome.::GO:0007409; P:axonogenesis; IBA:RefGenome.::GO:0060070; P:canonical Wnt receptor signaling pathway; IBA:RefGenome.::GO:0033278; P:cell proliferation in midbrain; IGI:MGI.::GO:0001736; P:establishment of planar polarity; IGI:MGI.::GO:0007199; P:G-protein signaling, coupled to cGMP nucleotide second messenger; IBA:RefGenome.::GO:0008406; P:gonad development; IBA:RefGenome.::GO:0001942; P:hair follicle development; IMP:MGI.::GO:0042472; P:inner ear morphogenesis; IGI:MGI.::GO:0001843; P:neural tube closure; IGI:MGI.::GO:0030168; P:platelet activation; IMP:MGI.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IBA:RefGenome.::GO:0060071; P:Wnt receptor signaling pathway, planar cell polarity pathway; IDA:MGI.
638B2VBW9    674   UVRB_ERWT9 UvrABC system protein B OS=Erwinia...719     34.7     30     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
639P10125    709   UVRB_MICLC UvrABC system protein B OS=3333 / ...1099     34.7     27     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
640A6RMZ2    626   SPB4_BOTFB ATP-dependent rRNA helicase spb4 O...929     34.7     29     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
641P20447    523   DBP3_YEAST ATP-dependent RNA helicase DBP3 OS...729.1     34.7     28     46GO:0005730; C:nucleolus; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; TAS:SGD.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000027; P:ribosomal large subunit assembly; IMP:SGD.::GO:0006364; P:rRNA processing; IMP:SGD.
642Q54KG1    671   DDX41_DICDI Probable ATP-dependent RNA helica...699.1     34.7     32     46GO:0005813; C:centrosome; IDA:dictyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006396; P:RNA processing; ISS:dictyBase.
643B8G8R1    664   UVRB_CHLAD UvrABC system protein B OS=Chlorof...819.2     34.7     25     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
644Q0UN57    1184   PRP5_PHANO Pre-mRNA-processing ATP-dependent ...749.4     34.7     28     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
645Q9UHL0    483   DDX25_HUMAN ATP-dependent RNA helicase DDX25 ...529.5     34.7     35     58GO:0033391; C:chromatoid body; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; ISS:UniProtKB.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006406; P:mRNA export from nucleus; ISS:UniProtKB.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; ISS:UniProtKB.::GO:0007286; P:spermatid development; ISS:UniProtKB.
646P93831    902   CLF_ARATH Histone-lysine N-methyltransferase ...1609.6     34.7     23     42GO:0005634; C:nucleus; IDA:TAIR.
GO:0018024; F:histone-lysine N-methyltransferase activity; IEA:EC.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003727; F:single-stranded RNA binding; IDA:TAIR.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009294; P:DNA mediated transformation; IMP:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0009965; P:leaf morphogenesis; IMP:TAIR.::GO:0045857; P:negative regulation of molecular function, epigenetic; IMP:TAIR.::GO:0006349; P:regulation of gene expression by genetic imprinting; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0010228; P:vegetative to reproductive phase transition of meristem; IMP:TAIR.
647B0TJ29    436   RHLB_SHEHH ATP-dependent RNA helicase rhlB OS...1139.6     34.3     26     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
648Q2TBP1    483   DDX25_BOVIN ATP-dependent RNA helicase DDX25 ...569.6     34.3     34     57GO:0033391; C:chromatoid body; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; ISS:UniProtKB.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006406; P:mRNA export from nucleus; ISS:UniProtKB.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; ISS:UniProtKB.::GO:0007286; P:spermatid development; ISS:UniProtKB.
649Q3IKF4    664   UVRB_PSEHT UvrABC system protein B OS=Pseudoa...1289.7     34.7     24     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
650Q0IJ05    739   OSBL9_XENTR Oxysterol-binding protein-related...2549.8     34.7     22     40
GO:0005543; F:phospholipid binding; IEA:InterPro.
GO:0006869; P:lipid transport; IEA:UniProtKB-KW.
651Q68FE6    1223   FA65A_MOUSE Protein FAM65A OS=Mus musculus (M...1279.8     34.7     24     51GO:0005737; C:cytoplasm; IDA:UniProtKB.
GO:0005488; F:binding; IEA:InterPro.
652P0CR00    484   RRP3_CRYNJ ATP-dependent rRNA helicase RRP3 O...969.9     34.3     23     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
653P0CR01    484   RRP3_CRYNB ATP-dependent rRNA helicase RRP3 O...969.9     34.3     23     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
654A3LRW2    526   DBP3_PICST ATP-dependent RNA helicase DBP3 OS...759.9     34.3     27     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
655Q0UR48    610   HAS1_PHANO ATP-dependent RNA helicase HAS1 OS...1099.9     34.7     29     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
records
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