rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
931 | Q99M28 | 305 | RNPS1_MOUSE RNA-binding protein with serine-r... | 89 | 1.3 | 35.4 | 27 | 48 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 932 | Q4R5N1 | 305 | RNPS1_MACFA RNA-binding protein with serine-r... | 89 | 1.3 | 35.4 | 27 | 48 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 933 | Q15287 | 305 | RNPS1_HUMAN RNA-binding protein with serine-r... | 89 | 1.3 | 35.4 | 27 | 48 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IDA:UniProtKB.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 934 | A6QR16 | 305 | RNPS1_BOVIN RNA-binding protein with serine-r... | 89 | 1.3 | 35.4 | 27 | 48 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 935 | Q9UBK2 | 798 | PRGC1_HUMAN Peroxisome proliferator-activated... | 95 | 1.4 | 35.8 | 27 | 45 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; TAS:UniProtKB. | | | | | | | | | | GO:0050681; F:androgen receptor binding; NAS:UniProtKB.::GO:0003677; F:DNA binding; TAS:UniProtKB.::GO:0016922; F:ligand-dependent nuclear receptor binding; IPI:UniProtKB.::GO:0030374; F:ligand-dependent nuclear receptor transcription coactivator activity; IDA:BHF-UCL.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; TAS:UniProtKB.::GO:0001104; F:RNA polymerase II transcription cofactor activity; TAS:UniProtKB.::GO:0008134; F:transcription factor binding; TAS:UniProtKB. | | | | | | | | | | GO:0030521; P:androgen receptor signaling pathway; NAS:UniProtKB.::GO:0050873; P:brown fat cell differentiation; TAS:UniProtKB.::GO:0001678; P:cellular glucose homeostasis; NAS:UniProtKB.::GO:0007586; P:digestion; TAS:UniProtKB.::GO:0019395; P:fatty acid oxidation; NAS:UniProtKB.::GO:0006094; P:gluconeogenesis; NAS:UniProtKB.::GO:0007005; P:mitochondrion organization; NAS:UniProtKB.::GO:0006397; P:mRNA processing; TAS:UniProtKB.::GO:0070997; P:neuron death; IDA:UniProtKB.::GO:0046321; P:positive regulation of fatty acid oxidation; TAS:UniProtKB.::GO:0045722; P:positive regulation of gluconeogenesis; TAS:UniProtKB.::GO:0035066; P:positive regulation of histone acetylation; TAS:UniProtKB.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; IDA:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:BHF-UCL.::GO:0006461; P:protein complex assembly; TAS:UniProtKB.::GO:0050821; P:protein stabilization; TAS:UniProtKB.::GO:0014850; P:response to muscle activity; ISS:BHF-UCL.::GO:0042594; P:response to starvation; NAS:UniProtKB.::GO:0008380; P:RNA splicing; TAS:UniProtKB.::GO:0001659; P:temperature homeostasis; TAS:UniProtKB.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:UniProtKB. | 936 | Q865B7 | 796 | PRGC1_BOVIN Peroxisome proliferator-activated... | 95 | 1.4 | 35.4 | 27 | 45 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; ISS:AgBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0070997; P:neuron death; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:AgBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 937 | Q6AYK1 | 305 | RNPS1_RAT RNA-binding protein with serine-ric... | 89 | 1.4 | 35 | 27 | 48 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 938 | Q865B6 | 796 | PRGC1_PIG Peroxisome proliferator-activated r... | 95 | 1.4 | 35.4 | 27 | 45 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; ISS:AgBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003713; F:transcription coactivator activity; ISS:UniProtKB. | | | | | | | | | | GO:0070997; P:neuron death; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:AgBase.::GO:0010941; P:regulation of cell death; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 939 | Q9UKM9 | 306 | RALY_HUMAN RNA-binding protein Raly OS=Homo s... | 75 | 1.7 | 34.7 | 28 | 51 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0030530; C:heterogeneous nuclear ribonucleoprotein complex; TAS:ProtInc. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; TAS:ProtInc. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB. | 940 | Q7TN98 | 729 | CPEB4_MOUSE Cytoplasmic polyadenylation eleme... | 65 | 1.4 | 35.4 | 29 | 49 | GO:0045202; C:synapse; IDA:MGI. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:MGI. | | | | | | | | | | | 941 | Q9QYK2 | 796 | PRGC1_RAT Peroxisome proliferator-activated r... | 95 | 1.5 | 35.4 | 27 | 45 | GO:0005829; C:cytosol; IDA:RGD.::GO:0005634; C:nucleus; IDA:RGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007005; P:mitochondrion organization; IMP:RGD.::GO:0070997; P:neuron death; ISS:UniProtKB.::GO:0046321; P:positive regulation of fatty acid oxidation; IMP:RGD.::GO:0045722; P:positive regulation of gluconeogenesis; TAS:RGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 942 | O70343 | 797 | PRGC1_MOUSE Peroxisome proliferator-activated... | 95 | 1.5 | 35.4 | 27 | 45 | GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0031490; F:chromatin DNA binding; IDA:MGI.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008134; F:transcription factor binding; IPI:BHF-UCL. | | | | | | | | | | GO:0034599; P:cellular response to oxidative stress; IMP:MGI.::GO:0043524; P:negative regulation of neuron apoptotic process; IMP:MGI.::GO:0070997; P:neuron death; ISS:UniProtKB.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; IDA:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:BHF-UCL.::GO:0022904; P:respiratory electron transport chain; IDA:MGI.::GO:0014850; P:response to muscle activity; IMP:BHF-UCL.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 943 | Q64012 | 312 | RALY_MOUSE RNA-binding protein Raly OS=Mus mu... | 75 | 4.2 | 33.5 | 27 | 51 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 944 | O42923 | 490 | CIP1_SCHPO RNA-binding post-transcriptional r... | 121 | 1.6 | 35.4 | 26 | 42 | GO:0005829; C:cytosol; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0034599; P:cellular response to oxidative stress; IGI:PomBase.::GO:2000815; P:regulation of mRNA stability involved in response to oxidative stress; IMP:PomBase. | 945 | A1A4K8 | 237 | U2AF1_BOVIN Splicing factor U2AF 35 kDa subun... | 66 | 1.6 | 34.7 | 32 | 53 | GO:0016607; C:nuclear speck; ISS:UniProtKB.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 946 | Q5U3G4 | 280 | RDM1_DANRE RAD52 motif-containing protein 1 O... | 61 | 1.6 | 35 | 26 | 54 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 947 | Q9D883 | 239 | U2AF1_MOUSE Splicing factor U2AF 35 kDa subun... | 66 | 1.6 | 34.7 | 32 | 53 | GO:0016607; C:nuclear speck; IDA:UniProtKB.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0050733; F:RS domain binding; IPI:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 948 | Q01081 | 240 | U2AF1_HUMAN Splicing factor U2AF 35 kDa subun... | 66 | 1.6 | 34.7 | 32 | 53 | GO:0015030; C:Cajal body; TAS:ProtInc.::GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0016607; C:nuclear speck; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 949 | Q17RY0 | 729 | CPEB4_HUMAN Cytoplasmic polyadenylation eleme... | 65 | 1.6 | 35.4 | 29 | 49 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 950 | Q91572 | 568 | CPE1A_XENLA Cytoplasmic polyadenylation eleme... | 106 | 7.8 | 33.1 | 26 | 45 | GO:0016020; C:membrane; IEA:UniProtKB-SubCell.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0043234; C:protein complex; IPI:UniProtKB.::GO:0030529; C:ribonucleoprotein complex; IPI:UniProtKB.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. | 951 | Q75M35 | 955 | OML3_ORYSJ Protein MEI2-like 3 OS=Oryza sativ... | 195 | 2.5 | 34.7 | 25 | 41 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 952 | Q7KNF2 | 224 | PABP2_DROME Polyadenylate-binding protein 2 O... | 83 | 4.1 | 33.5 | 27 | 49 | GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; IDA:UniProtKB.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:FlyBase.::GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; IMP:FlyBase. | 953 | A7TQR2 | 333 | RRT5_VANPO Regulator of rDNA transcription pr... | 81 | 3.9 | 33.9 | 30 | 47 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 954 | Q52KN7 | 568 | CPE1B_XENLA Cytoplasmic polyadenylation eleme... | 106 | 8.7 | 33.1 | 26 | 45 | GO:0016020; C:membrane; IEA:UniProtKB-SubCell.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. | 955 | Q24562 | 416 | U2AF2_DROME Splicing factor U2AF 50 kDa subun... | 210 | 6.1 | 33.5 | 20 | 39 | GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.::GO:0005686; C:U2 snRNP; TAS:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008187; F:poly-pyrimidine tract binding; IDA:FlyBase.::GO:0005515; F:protein binding; IPI:FlyBase. | | | | | | | | | | GO:0007052; P:mitotic spindle organization; IMP:FlyBase.::GO:0051168; P:nuclear export; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 956 | Q8BTV2 | 471 | CPSF7_MOUSE Cleavage and polyadenylation spec... | 51 | 7.8 | 33.1 | 33 | 59 | GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 957 | Q05CL8 | 570 | LARP7_MOUSE La-related protein 7 OS=Mus muscu... | 65 | 2.2 | 34.7 | 32 | 49 | GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006396; P:RNA processing; IEA:InterPro. | 958 | Q08CK7 | 598 | IF2B1_DANRE Insulin-like growth factor 2 mRNA... | 165 | 2.3 | 34.7 | 23 | 43 | GO:0070937; C:CRD-mediated mRNA stability complex; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. | 959 | Q8N684 | 471 | CPSF7_HUMAN Cleavage and polyadenylation spec... | 51 | 7.7 | 33.1 | 33 | 59 | GO:0005849; C:mRNA cleavage factor complex; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0051262; P:protein tetramerization; IDA:UniProtKB.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 960 | Q5XI29 | 462 | CPSF7_RAT Cleavage and polyadenylation specif... | 51 | 7.8 | 33.1 | 33 | 59 | GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 961 | Q9VSR3 | 704 | ORB2_DROME Probable RNA-binding protein orb2 ... | 62 | 2.5 | 34.7 | 27 | 52 | GO:0043679; C:axon terminus; IDA:FlyBase.::GO:0044297; C:cell body; IDA:FlyBase.::GO:0044292; C:dendrite terminus; IDA:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB. | | | | | | | | | | GO:0008356; P:asymmetric cell division; IMP:FlyBase.::GO:0007616; P:long-term memory; IDA:FlyBase.::GO:0008049; P:male courtship behavior; IMP:FlyBase. |