rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
871 | Q06AA4 | 282 | SNRPA_PIG U1 small nuclear ribonucleoprotein ... | 66 | 0.27 | 37.4 | 36 | 52 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0017069; F:snRNA binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro. | 872 | Q3UZ01 | 514 | RBM40_MOUSE RNA-binding protein 40 OS=Mus mus... | 148 | 0.29 | 37.7 | 26 | 46 | GO:0005689; C:U12-type spliceosomal complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 873 | P09012 | 282 | SNRPA_HUMAN U1 small nuclear ribonucleoprotei... | 66 | 0.29 | 37.4 | 36 | 52 | GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005681; C:spliceosomal complex; IDA:HGNC. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0017069; F:snRNA binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:HGNC. | 874 | Q62189 | 287 | SNRPA_MOUSE U1 small nuclear ribonucleoprotei... | 78 | 0.29 | 37.4 | 35 | 50 | GO:0005681; C:spliceosomal complex; ISS:HGNC. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0017069; F:snRNA binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro. | 875 | A1A5R7 | 754 | REXON_RAT Putative RNA exonuclease NEF-sp OS=... | 182 | 0.29 | 37.7 | 23 | 46 | | | | | | | | | | | GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 876 | Q9P789 | 1060 | YN8E_SCHPO Pumilio domain-containing protein ... | 62 | 0.29 | 37.7 | 34 | 55 | GO:0005829; C:cytosol; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 877 | P34217 | 668 | PIN4_YEAST RNA-binding protein PIN4 OS=Saccha... | 72 | 9.6 | 32.7 | 26 | 47 | GO:0005737; C:cytoplasm; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000077; P:DNA damage checkpoint; IGI:SGD.::GO:0000086; P:G2/M transition of mitotic cell cycle; IMP:SGD. | 878 | O00425 | 579 | IF2B3_HUMAN Insulin-like growth factor 2 mRNA... | 166 | 2.2 | 35 | 22 | 43 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; IDA:UniProtKB.::GO:0048027; F:mRNA 5'-UTR binding; IDA:BHF-UCL.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0045182; F:translation regulator activity; ISS:BHF-UCL. | | | | | | | | | | GO:0009653; P:anatomical structure morphogenesis; TAS:ProtInc.::GO:0017148; P:negative regulation of translation; ISS:BHF-UCL.::GO:0042035; P:regulation of cytokine biosynthetic process; IC:BHF-UCL.::GO:0006412; P:translation; TAS:ProtInc. | 879 | Q7PZY1 | 683 | EIF3B_ANOGA Eukaryotic translation initiation... | 50 | 0.31 | 37.7 | 36 | 60 | GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; ISS:UniProtKB. | | | | | | | | | | GO:0006446; P:regulation of translational initiation; ISS:UniProtKB. | 880 | Q28009 | 513 | FUS_BOVIN RNA-binding protein FUS OS=Bos taur... | 86 | 3.7 | 34.3 | 29 | 44 | GO:0005737; C:cytoplasm; ISS:AgBase.::GO:0005634; C:nucleus; ISS:AgBase. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:AgBase. | 881 | O73932 | 594 | IF23A_XENLA Insulin-like growth factor 2 mRNA... | 166 | 0.31 | 37.7 | 27 | 45 | GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IPI:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003730; F:mRNA 3'-UTR binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 882 | Q2T9U5 | 783 | REXON_BOVIN Putative RNA exonuclease NEF-sp O... | 270 | 0.32 | 37.7 | 20 | 40 | | | | | | | | | | | GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 883 | Q8SX83 | 5560 | SPEN_DROME Protein split ends OS=Drosophila m... | 163 | 0.33 | 37.7 | 18 | 45 | GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007411; P:axon guidance; IMP:UniProtKB.::GO:0007173; P:epidermal growth factor receptor signaling pathway; IMP:UniProtKB.::GO:0048106; P:establishment of thoracic bristle planar orientation; IMP:FlyBase.::GO:0007403; P:glial cell fate determination; IMP:UniProtKB.::GO:0008586; P:imaginal disc-derived wing vein morphogenesis; IMP:FlyBase.::GO:0035321; P:maintenance of imaginal disc-derived wing hair orientation; IMP:FlyBase.::GO:0007400; P:neuroblast fate determination; IMP:UniProtKB.::GO:0007422; P:peripheral nervous system development; IMP:FlyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0007379; P:segment specification; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IMP:UniProtKB.::GO:0016055; P:Wnt receptor signaling pathway; IMP:UniProtKB. | 884 | Q62176 | 237 | RBM38_MOUSE RNA-binding protein 38 OS=Mus mus... | 45 | 9.7 | 32.3 | 38 | 53 | GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0010830; P:regulation of myotube differentiation; IDA:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 885 | P35637 | 526 | FUS_HUMAN RNA-binding protein FUS OS=Homo sap... | 86 | 3.7 | 34.3 | 29 | 44 | GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; TAS:ProtInc.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0008219; P:cell death; IEA:UniProtKB-KW.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome. | 886 | P56959 | 518 | FUS_MOUSE RNA-binding protein FUS OS=Mus musc... | 86 | 3.5 | 34.3 | 29 | 44 | GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 887 | Q3MHP0 | 516 | RBM40_BOVIN RNA-binding protein 40 OS=Bos tau... | 84 | 0.37 | 37.4 | 32 | 55 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 888 | P0CN52 | 290 | EIF3G_CRYNJ Eukaryotic translation initiation... | 85 | 1.2 | 35.4 | 28 | 52 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 889 | P0CN53 | 290 | EIF3G_CRYNB Eukaryotic translation initiation... | 85 | 1.2 | 35.4 | 28 | 52 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 890 | Q9HFE6 | 478 | YNW6_SCHPO Uncharacterized RNA-binding protei... | 74 | 0.41 | 37 | 32 | 49 | GO:0005730; C:nucleolus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0042254; P:ribosome biogenesis; ISS:PomBase. | 891 | Q7TN99 | 716 | CPEB3_MOUSE Cytoplasmic polyadenylation eleme... | 65 | 0.43 | 37.4 | 31 | 49 | GO:0045202; C:synapse; IDA:MGI. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IDA:MGI. | | | | | | | | | | GO:0017148; P:negative regulation of translation; IMP:MGI. | 892 | Q62671 | 2788 | UBR5_RAT E3 ubiquitin-protein ligase UBR5 OS=... | 55 | 0.43 | 37.4 | 44 | 60 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IBA:RefGenome. | 893 | Q6BT10 | 276 | EIF3G_DEBHA Eukaryotic translation initiation... | 28 | 3.1 | 33.9 | 50 | 71 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 894 | Q26548 | 273 | PPIE_SCHMA Peptidyl-prolyl cis-trans isomeras... | 39 | 0.44 | 36.6 | 41 | 69 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0042277; F:peptide binding; IEA:UniProtKB-KW.::GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006457; P:protein folding; IEA:UniProtKB-KW. | 895 | Q8NE35 | 698 | CPEB3_HUMAN Cytoplasmic polyadenylation eleme... | 65 | 0.45 | 37.4 | 31 | 49 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 896 | P84977 | 48 | GRP3_POPEU Glycine-rich RNA-binding protein 3... | 42 | 2.9 | 32 | 38 | 57 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 897 | Q28CH2 | 632 | CPEB3_XENTR Cytoplasmic polyadenylation eleme... | 65 | 0.48 | 37 | 31 | 49 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0048793; P:pronephros development; IMP:UniProtKB. | 898 | Q9D8T7 | 112 | SLIRP_MOUSE SRA stem-loop-interacting RNA-bin... | 87 | 0.51 | 34.7 | 26 | 49 | GO:0005739; C:mitochondrion; IDA:MGI.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 899 | B4KNN9 | 690 | EIF3B_DROMO Eukaryotic translation initiation... | 49 | 2.1 | 35 | 35 | 59 | GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; ISS:UniProtKB. | | | | | | | | | | GO:0006446; P:regulation of translational initiation; ISS:UniProtKB. | 900 | Q804A5 | 218 | EPA2A_XENLA Embryonic polyadenylate-binding p... | 74 | 0.58 | 35.8 | 27 | 53 | GO:0005737; C:cytoplasm; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:UniProtKB. | | | | | | | | | | | 901 | Q7Z5Q1 | 589 | CPEB2_HUMAN Cytoplasmic polyadenylation eleme... | 65 | 0.58 | 36.6 | 31 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. |