Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YER164W
Length:
1468
Number of sequences:
5887
Description:
YER164W CHD1 SGDID:S000000966, Chr V from 505392-509798, Genome Release 64-1-1, Verified ORF, "Nucleosome remodeling factor that functions in regulation of transcription elongation; contains a chromo domain, a helicase domain and a DNA-binding domain; component of both the SAGA and SLIK complexes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61Q03468    1493   ERCC6_HUMAN DNA excision repair protein ERCC-...5016e-76     282     33     53GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0005625; C:soluble fraction; IDA:UniProtKB.::GO:0008023; C:transcription elongation factor complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; IDA:UniProtKB.::GO:0003682; F:chromatin binding; IDA:UniProtKB.::GO:0003677; F:DNA binding; IDA:UniProtKB.::GO:0008094; F:DNA-dependent ATPase activity; IDA:UniProtKB.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008022; F:protein C-terminus binding; IPI:UniProtKB.::GO:0032403; F:protein complex binding; IDA:UniProtKB.::GO:0047485; F:protein N-terminus binding; IPI:UniProtKB.
GO:0006284; P:base-excision repair; IMP:UniProtKB.::GO:0032786; P:positive regulation of transcription elongation, DNA-dependent; IDA:UniProtKB.::GO:0006366; P:transcription from RNA polymerase II promoter; NAS:UniProtKB.::GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:UniProtKB.
62O42861    922   YFC1_SCHPO Uncharacterized ATP-dependent heli...5444e-74     271     35     50GO:0016585; C:chromatin remodeling complex; ISS:PomBase.::GO:0000790; C:nuclear chromatin; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IDA:PomBase.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:PomBase.
GO:0006338; P:chromatin remodeling; ISS:PomBase.::GO:0032017; P:positive regulation of Ran protein signal transduction; IGI:PomBase.
63P40352    1085   RAD26_YEAST DNA repair and recombination prot...5266e-74     273     33     51GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IDA:SGD.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:SGD.
64P87114    944   FFT1_SCHPO Uncharacterized ATP-dependent heli...5582e-72     266     35     51GO:0016585; C:chromatin remodeling complex; ISS:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006338; P:chromatin remodeling; ISS:PomBase.
65P31380    1131   FUN30_YEAST Uncharacterized ATP-dependent hel...5729e-71     263     33     51GO:0031934; C:mating-type region heterochromatin; IPI:SGD.::GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003682; F:chromatin binding; IDA:SGD.::GO:0003677; F:DNA binding; IDA:SGD.::GO:0008094; F:DNA-dependent ATPase activity; IDA:SGD.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0042803; F:protein homodimerization activity; IDA:SGD.
GO:0000183; P:chromatin silencing at rDNA; IMP:SGD.::GO:0030466; P:chromatin silencing at silent mating-type cassette; IMP:SGD.::GO:0006348; P:chromatin silencing at telomere; IMP:SGD.::GO:0070869; P:heterochromatin assembly involved in chromatin silencing; IMP:SGD.::GO:0070870; P:heterochromatin maintenance involved in chromatin silencing; IMP:SGD.
66Q9UR24    973   RHP26_SCHPO DNA repair protein rhp26 OS=Schiz...5153e-70     260     33     52GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:PomBase.
67O43065    1953   MOT1_SCHPO Probable helicase mot1 OS=Schizosa...6126e-69     260     32     50GO:0005634; C:nucleus; IC:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; ISS:PomBase.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0017025; F:TBP-class protein binding; ISS:PomBase.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:PomBase.
68P32333    1867   MOT1_YEAST TATA-binding protein-associated fa...5342e-66     252     33     51GO:0005739; C:mitochondrion; IDA:SGD.::GO:0000228; C:nuclear chromosome; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IDA:SGD.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0017025; F:TBP-class protein binding; IPI:SGD.
GO:0045898; P:regulation of RNA polymerase II transcriptional preinitiation complex assembly; IMP:SGD.::GO:0006364; P:rRNA processing; IMP:SGD.::GO:0042790; P:transcription of nuclear large rRNA transcript from RNA polymerase I promoter; IMP:SGD.
69O14981    1849   BTAF1_HUMAN TATA-binding protein-associated f...5372e-64     245     31     50GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:UniProtKB.
GO:0045892; P:negative regulation of transcription, DNA-dependent; NAS:UniProtKB.
70Q9JIM3    699   RAD26_MOUSE Putative DNA repair and recombina...5932e-63     236     30     48GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
71Q9DG67    918   RA54B_CHICK DNA repair and recombination prot...5722e-62     235     30     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
72B3MMA5    791   RAD54_DROAN DNA repair and recombination prot...5072e-61     231     33     50GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0000711; P:meiotic DNA repair synthesis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
73Q29KH2    782   RAD54_DROPS DNA repair and recombination prot...5443e-61     230     32     50GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0000711; P:meiotic DNA repair synthesis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
74P41410    852   RAD54_SCHPO DNA repair protein rhp54 OS=Schiz...5043e-61     231     31     51GO:0005634; C:nucleus; IDA:PomBase.::GO:0005819; C:spindle; IDA:PomBase.
GO:0005524; F:ATP binding; IC:PomBase.::GO:0015616; F:DNA translocase activity; ISS:PomBase.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0033170; F:protein-DNA loading ATPase activity; TAS:PomBase.
GO:0006338; P:chromatin remodeling; ISS:PomBase.::GO:0000724; P:double-strand break repair via homologous recombination; ISS:PomBase.::GO:0030491; P:heteroduplex formation; ISS:PomBase.::GO:0006311; P:meiotic gene conversion; IMP:PomBase.::GO:0007131; P:reciprocal meiotic recombination; IMP:PomBase.
75B4GS98    782   RAD54_DROPE DNA repair and recombination prot...5444e-61     230     31     50GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0000711; P:meiotic DNA repair synthesis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
76Q5T890    712   RAD26_HUMAN Putative DNA repair and recombina...5948e-61     228     29     47GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
77A6QQR4    1242   ERC6L_BOVIN DNA excision repair protein ERCC-...5248e-61     233     31     50GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
78Q8BHK9    1240   ERC6L_MOUSE DNA excision repair protein ERCC-...5238e-61     233     32     50GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
79B4MX21    784   RAD54_DROWI DNA repair and recombination prot...5081e-60     228     33     50GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0000711; P:meiotic DNA repair synthesis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
80A2BGR3    1451   ERC6L_DANRE DNA excision repair protein ERCC-...5351e-60     233     31     48GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
81B3NAN8    784   RAD54_DROER DNA repair and recombination prot...5123e-60     227     31     50GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0000711; P:meiotic DNA repair synthesis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
82Q9Y620    910   RA54B_HUMAN DNA repair and recombination prot...4915e-60     228     31     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003678; F:DNA helicase activity; TAS:ProtInc.::GO:0015616; F:DNA translocase activity; IDA:MGI.::GO:0003724; F:RNA helicase activity; TAS:ProtInc.
GO:0000724; P:double-strand break repair via homologous recombination; IDA:MGI.::GO:0006312; P:mitotic recombination; TAS:ProtInc.::GO:0007131; P:reciprocal meiotic recombination; TAS:ProtInc.
83O76460    784   RAD54_DROME DNA repair and recombination prot...5121e-59     225     32     50GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; IMP:UniProtKB.::GO:0030261; P:chromosome condensation; TAS:FlyBase.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; IMP:UniProtKB.::GO:0046843; P:dorsal appendage formation; IMP:FlyBase.::GO:0045003; P:double-strand break repair via synthesis-dependent strand annealing; IMP:FlyBase.::GO:0008298; P:intracellular mRNA localization; TAS:FlyBase.::GO:0000711; P:meiotic DNA repair synthesis; IMP:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007131; P:reciprocal meiotic recombination; TAS:FlyBase.::GO:0006417; P:regulation of translation; TAS:FlyBase.::GO:0010212; P:response to ionizing radiation; IMP:UniProtKB.
84Q4IAK7    1691   SWR1_GIBZE Helicase SWR1 OS=(Wheat head bligh...1601e-38     162     49     65GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
85B4NXB8    784   RAD54_DROYA DNA repair and recombination prot...5121e-59     225     31     49GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0000711; P:meiotic DNA repair synthesis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
86Q759G7    1486   SWR1_ASHGO Helicase SWR1 OS=Y-1056) (Yeast) (...1542e-34     148     47     64GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
87B4KHL5    783   RAD54_DROMO DNA repair and recombination prot...5578e-59     223     31     49GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0000711; P:meiotic DNA repair synthesis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
88Q6PFE3    886   RA54B_MOUSE DNA repair and recombination prot...4959e-59     223     30     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
89Q6FK48    1450   SWR1_CANGA Helicase SWR1 OS=NRRL Y-65) (Yeast...1632e-34     148     47     63GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
90O12944    733   RAD54_CHICK DNA repair and recombination prot...5051e-58     221     32     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
91Q5ARK3    1698   SWR1_EMENI Helicase swr1 OS=194 / M139) (Aspe...2419e-39     162     38     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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