Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YER164W
Length:
1468
Number of sequences:
5887
Description:
YER164W CHD1 SGDID:S000000966, Chr V from 505392-509798, Genome Release 64-1-1, Verified ORF, "Nucleosome remodeling factor that functions in regulation of transcription elongation; contains a chromo domain, a helicase domain and a DNA-binding domain; component of both the SAGA and SLIK complexes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
361Q8NJM2    869   DBP10_ASPFU ATP-dependent RNA helicase dbp10 ...1082.7     36.2     22     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
362Q6HPE6    528   CSHA_BACHK DEAD-box ATP-dependent RNA helicas...1032.8     36.2     21     47GO:0043590; C:bacterial nucleoid; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; ISS:UniProtKB.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:UniProtKB.::GO:0003723; F:RNA binding; ISS:UniProtKB.
363Q81VG0    528   CSHA_BACAN DEAD-box ATP-dependent RNA helicas...1032.8     36.2     21     47GO:0043590; C:bacterial nucleoid; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; ISS:UniProtKB.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:UniProtKB.::GO:0003723; F:RNA binding; ISS:UniProtKB.
364A0R8U6    528   CSHA_BACAH DEAD-box ATP-dependent RNA helicas...1032.8     36.2     21     47GO:0043590; C:bacterial nucleoid; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; ISS:UniProtKB.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:UniProtKB.::GO:0003723; F:RNA binding; ISS:UniProtKB.
365O00257    560   CBX4_HUMAN E3 SUMO-protein ligase CBX4 OS=Hom...832.8     36.2     35     49GO:0005794; C:Golgi apparatus; IDA:HPA.::GO:0035102; C:PRC1 complex; IDA:UniProtKB.
GO:0019899; F:enzyme binding; IPI:UniProtKB.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003714; F:transcription corepressor activity; TAS:ProtInc.
GO:0006916; P:anti-apoptosis; TAS:ProtInc.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
366P27381    227   VP09_BPPRD DNA packaging protein OS=Enterobac...1122.9     35.4     29     46GO:0055036; C:virion membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006323; P:DNA packaging; IEA:UniProtKB-KW.
367O55187    551   CBX4_MOUSE E3 SUMO-protein ligase CBX4 OS=Mus...832.9     36.2     35     49GO:0035102; C:PRC1 complex; ISS:UniProtKB.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0035064; F:methylated histone residue binding; IDA:UniProtKB.::GO:0051219; F:phosphoprotein binding; IPI:MGI.::GO:0003727; F:single-stranded RNA binding; IDA:UniProtKB.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
368Q73EU1    525   CSHA_BACC1 DEAD-box ATP-dependent RNA helicas...1032.9     35.8     21     47GO:0043590; C:bacterial nucleoid; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; ISS:UniProtKB.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:UniProtKB.::GO:0003723; F:RNA binding; ISS:UniProtKB.
369Q8VWK4    300   TRB1_ARATH Telomere repeat-binding factor 1 O...332.9     35.4     48     61GO:0000786; C:nucleosome; IEA:InterPro.::GO:0005634; C:nucleus; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003691; F:double-stranded telomeric DNA binding; IDA:TAIR.::GO:0042803; F:protein homodimerization activity; IPI:TAIR.
GO:0006334; P:nucleosome assembly; IEA:InterPro.::GO:0009737; P:response to abscisic acid stimulus; IEP:TAIR.::GO:0009733; P:response to auxin stimulus; IEP:TAIR.::GO:0046686; P:response to cadmium ion; IEP:TAIR.::GO:0009723; P:response to ethylene stimulus; IEP:TAIR.::GO:0009739; P:response to gibberellin stimulus; IEP:TAIR.::GO:0009753; P:response to jasmonic acid stimulus; IEP:TAIR.::GO:0009751; P:response to salicylic acid stimulus; IEP:TAIR.::GO:0009651; P:response to salt stress; IEP:TAIR.
370Q9T1Q7    460   VP41_BPAPS Putative protein p41 OS=APSE-1). G...723     35.8     28     49
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro.
371Q63GX5    528   CSHA_BACCZ DEAD-box ATP-dependent RNA helicas...1033     35.8     21     47GO:0043590; C:bacterial nucleoid; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; ISS:UniProtKB.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:UniProtKB.::GO:0003723; F:RNA binding; ISS:UniProtKB.
372Q5VRY0    625   RH39_ORYSJ DEAD-box ATP-dependent RNA helicas...1443.1     35.8     26     44
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.
373Q8TFL3    715   DBP7_CANGA ATP-dependent RNA helicase DBP7 OS...1233.2     35.8     26     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
374Q81IT9    533   CSHA_BACCR DEAD-box ATP-dependent RNA helicas...1033.4     35.8     21     47GO:0043590; C:bacterial nucleoid; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; ISS:UniProtKB.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:UniProtKB.::GO:0003723; F:RNA binding; ISS:UniProtKB.
375B0BT63    969   RAPA_ACTPJ RNA polymerase-associated protein ...503.6     35.8     36     56
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
376Q9M2X3    295   TRB3_ARATH Telomere repeat-binding factor 3 O...294     35     48     55GO:0000786; C:nucleosome; IEA:InterPro.::GO:0005634; C:nucleus; IEA:UniProtKB-KW.
GO:0003691; F:double-stranded telomeric DNA binding; IDA:TAIR.::GO:0042803; F:protein homodimerization activity; IPI:TAIR.::GO:0043047; F:single-stranded telomeric DNA binding; IDA:TAIR.
GO:0006334; P:nucleosome assembly; IEA:InterPro.::GO:0009733; P:response to auxin stimulus; IEP:TAIR.::GO:0046686; P:response to cadmium ion; IEP:TAIR.::GO:0009723; P:response to ethylene stimulus; IEP:TAIR.::GO:0009739; P:response to gibberellin stimulus; IEP:TAIR.::GO:0009753; P:response to jasmonic acid stimulus; IEP:TAIR.::GO:0009751; P:response to salicylic acid stimulus; IEP:TAIR.::GO:0009651; P:response to salt stress; IEP:TAIR.
377Q0CMM8    928   DBP10_ASPTN ATP-dependent RNA helicase dbp10 ...1014     35.8     23     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
378A2QWW0    766   MAK5_ASPNC ATP-dependent RNA helicase mak5 OS...1054     35.8     21     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
379A3QA31    968   RAPA_SHELP RNA polymerase-associated protein ...634.1     35.8     32     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
380B3H0F9    969   RAPA_ACTP7 RNA polymerase-associated protein ...504.1     35.8     36     56
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
381A3MZ32    969   RAPA_ACTP2 RNA polymerase-associated protein ...504.1     35.8     36     56
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
382Q5N3H1    666   UVRB_SYNP6 UvrABC system protein B OS=(Anacys...1494.3     35.4     26     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
383Q31QS4    666   UVRB_SYNE7 UvrABC system protein B OS=Synecho...1494.3     35.4     26     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
384Q0V1Z7    808   DRS1_PHANO ATP-dependent RNA helicase DRS1 OS...1084.9     35.4     22     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
385A1BI09    685   UVRB_CHLPD UvrABC system protein B OS=Chlorob...1475     35.4     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
386A6RUH2    801   DRS1_BOTFB ATP-dependent RNA helicase drs1 OS...1465.4     35.4     22     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
387A8FQW4    968   RAPA_SHESH RNA polymerase-associated protein ...705.5     35.4     29     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
388Q4I830    796   DRS1_GIBZE ATP-dependent RNA helicase DRS1 OS...1136.4     35     22     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
389A0KGL5    955   RAPA_AERHH RNA polymerase-associated protein ...506.5     35     38     52
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
390Q8DCG1    969   RAPA_VIBVU RNA polymerase-associated protein ...656.7     35     34     52
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
391Q8K1N2    1249   PHLB2_MOUSE Pleckstrin homology-like domain f...596.9     35     42     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005543; F:phospholipid binding; IEA:InterPro.
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