UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YER159C

Length:

440

Number of sequences:

5887

Description:

YER159C-A YER159C-A SGDID:S000007403, Chr V from 498124-496802, Genome Release 64-1-1, reverse complement, transposable_element_gene, "Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
1	P40096	142	NCB1_YEAST Negative cofactor 2 complex subuni...	142	5e-100	290	100	100	GO:0017054; C:negative cofactor 2 complex; IDA:SGD.
									GO:0005515; F:protein binding; IPI:IntAct.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003713; F:transcription coactivator activity; IDA:SGD.::GO:0003714; F:transcription corepressor activity; IMP:SGD.
									GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IGI:SGD.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
2	Q6C6M5	114	DPB3_YARLI DNA polymerase epsilon subunit C O...	78	2e-19	83.2	46	74	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
									GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
3	Q10315	199	DPB3_SCHPO DNA polymerase epsilon subunit C O...	93	1e-17	80.1	40	66	GO:0000785; C:chromatin; NAS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0031261; C:DNA replication preinitiation complex; IC:PomBase.::GO:0008622; C:epsilon DNA polymerase complex; IPI:PomBase.
									GO:0003887; F:DNA-directed DNA polymerase activity; TAS:PomBase.::GO:0005515; F:protein binding; IPI:PomBase.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
									GO:0034613; P:cellular protein localization; IGI:PomBase.::GO:0006261; P:DNA-dependent DNA replication; IMP:PomBase.
4	Q2YDP3	205	NC2A_BOVIN Dr1-associated corepressor OS=Bos ...	79	2e-17	79.7	46	71	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
									GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
5	A0JPP1	205	NC2A_RAT Dr1-associated corepressor OS=Rattus...	79	2e-17	79.7	46	71	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
									GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
6	Q9D6N5	205	NC2A_MOUSE Dr1-associated corepressor OS=Mus ...	79	2e-17	79.7	46	71	GO:0005634; C:nucleus; IDA:MGI.
									GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003714; F:transcription corepressor activity; IDA:MGI.::GO:0008134; F:transcription factor binding; IDA:MGI.
									GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
7	Q14919	205	NC2A_HUMAN Dr1-associated corepressor OS=Homo...	79	2e-17	79.3	46	71	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.::GO:0003714; F:transcription corepressor activity; TAS:ProtInc.
									GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
8	Q54DA1	550	NC2A_DICDI Dr1-associated corepressor homolog...	79	0.00000000000004	72.8	43	67	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
9	Q02516	242	HAP5_YEAST Transcriptional activator HAP5 OS=...	79	0.000002	49.3	29	54	GO:0016602; C:CCAAT-binding factor complex; IDA:SGD.
									GO:0003677; F:DNA binding; IPI:SGD.::GO:0005515; F:protein binding; IPI:IntAct.
									GO:0000436; P:carbon catabolite activation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0043457; P:regulation of cellular respiration; IGI:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
10	Q6WV67	125	H2A_MYTTR Histone H2A OS=Mytilus trossulus (B...	90	0.000005	46.2	26	48	GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0006334; P:nucleosome assembly; IEA:InterPro.
11	C6Y4D0	87	YCGV_SCHPO Putative transcription factor C16C...	75	0.000006	45.1	29	59	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
12	Q9ZVL3	217	NFYC3_ARATH Nuclear transcription factor Y su...	77	0.00001	46.2	31	48	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
13	Q8L4B2	231	NFYC9_ARATH Nuclear transcription factor Y su...	77	0.00001	46.2	31	48	GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
									GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
14	Q9FMV5	250	NFYC4_ARATH Nuclear transcription factor Y su...	107	0.00002	45.8	27	47	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
									GO:0009738; P:abscisic acid mediated signaling pathway; IMP:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
15	Q9FGP6	186	NFYC5_ARATH Nuclear transcription factor Y su...	93	0.00003	45.1	27	54	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
16	Q9SMP0	234	NFYC1_ARATH Nuclear transcription factor Y su...	84	0.00003	45.4	30	48	GO:0005634; C:nucleus; IDA:TAIR.
									GO:0005515; F:protein binding; IPI:IntAct.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
									GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
17	P40279	136	H2A_EUGGR Histone H2A OS=Euglena gracilis. GN...	85	0.00004	43.9	27	46	GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0006334; P:nucleosome assembly; IEA:InterPro.
18	P69140	126	H2A_PARAN Histone H2A, gonadal OS=Parechinus ...	95	0.00006	43.1	25	44	GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0006334; P:nucleosome assembly; IEA:InterPro.
19	P69139	126	H2A3_PSAMI Late histone H2A.3, gonadal OS=Psa...	95	0.00006	43.1	25	44	GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0006334; P:nucleosome assembly; IEA:InterPro.
20	Q8LCG7	199	NFYC2_ARATH Nuclear transcription factor Y su...	108	0.00006	44.3	28	43	GO:0005737; C:cytoplasm; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
									GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
									GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
21	P09588	127	H2A_CAEEL Histone H2A OS=Caenorhabditis elega...	91	0.00007	43.1	25	45	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0006952; P:defense response; IMP:WormBase.::GO:0006281; P:DNA repair; NAS:UniProtKB.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006334; P:nucleosome assembly; IEA:InterPro.::GO:0006997; P:nucleus organization; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0060465; P:pharynx development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006355; P:regulation of transcription, DNA-dependent; NAS:UniProtKB.
22	Q58CM8	195	NFYCA_ARATH Nuclear transcription factor Y su...	110	0.00009	43.9	24	49	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
23	P07793	120	H2A4_PSAMI Late histone H2A.2.2 OS=Psammechin...	90	0.00009	42.4	24	46	GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0006334; P:nucleosome assembly; IEA:InterPro.
24	P84057	124	H2A_TIGCA Histone H2A OS=Tigriopus californic...	91	0.0001	42.4	24	46	GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0006334; P:nucleosome assembly; IEA:InterPro.
25	P84056	124	H2A_RHYAM Histone H2A OS=Rhynchosciara americ...	91	0.0001	42.4	24	46	GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0006334; P:nucleosome assembly; IEA:InterPro.
26	P84055	124	H2A_DROYA Histone H2A OS=Drosophila yakuba (F...	91	0.0001	42.4	24	46	GO:0005811; C:lipid particle; ISS:UniProtKB.::GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0006334; P:nucleosome assembly; IEA:InterPro.
27	P84054	124	H2A_DROSI Histone H2A OS=Drosophila simulans ...	91	0.0001	42.4	24	46	GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0006334; P:nucleosome assembly; IEA:InterPro.
28	P84051	124	H2A_DROME Histone H2A OS=Drosophila melanogas...	91	0.0001	42.4	24	46	GO:0005811; C:lipid particle; IDA:FlyBase.::GO:0000786; C:nucleosome; NAS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; NAS:UniProtKB.
									GO:0051298; P:centrosome duplication; IMP:FlyBase.::GO:0006334; P:nucleosome assembly; NAS:UniProtKB.
29	P84053	124	H2A_DROHY Histone H2A OS=Drosophila hydei (Fr...	91	0.0001	42.4	24	46	GO:0000786; C:nucleosome; NAS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; NAS:UniProtKB.
									GO:0006334; P:nucleosome assembly; NAS:UniProtKB.
30	P84052	124	H2A_DROER Histone H2A OS=Drosophila erecta (F...	91	0.0001	42.4	24	46	GO:0005811; C:lipid particle; ISS:UniProtKB.::GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0006334; P:nucleosome assembly; IEA:InterPro.
31	P79007	415	HAP5_SCHPO Transcriptional activator hap5 OS=...	79	0.0001	44.3	29	52	GO:0016602; C:CCAAT-binding factor complex; TAS:PomBase.::GO:0000785; C:chromatin; NAS:PomBase.::GO:0005737; C:cytoplasm; IDA:PomBase.
									GO:0000978; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding; TAS:PomBase.
									GO:0045893; P:positive regulation of transcription, DNA-dependent; IGI:PomBase.::GO:0006109; P:regulation of carbohydrate metabolic process; ISS:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; NAS:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.

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