Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YER159C
Length:
440
Number of sequences:
5887
Description:
YER159C-A YER159C-A SGDID:S000007403, Chr V from 498124-496802, Genome Release 64-1-1, reverse complement, transposable_element_gene, "Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31P79007    415   HAP5_SCHPO Transcriptional activator hap5 OS=...790.0001     44.3     29     52GO:0016602; C:CCAAT-binding factor complex; TAS:PomBase.::GO:0000785; C:chromatin; NAS:PomBase.::GO:0005737; C:cytoplasm; IDA:PomBase.
GO:0000978; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding; TAS:PomBase.
GO:0045893; P:positive regulation of transcription, DNA-dependent; IGI:PomBase.::GO:0006109; P:regulation of carbohydrate metabolic process; ISS:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; NAS:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
32P27661    143   H2AX_MOUSE Histone H2A.x OS=Mus musculus (Mou...910.0001     42.7     26     45GO:0000794; C:condensed nuclear chromosome; IDA:MGI.::GO:0001673; C:male germ cell nucleus; IDA:MGI.::GO:0000790; C:nuclear chromatin; IDA:MGI.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005657; C:replication fork; IDA:MGI.::GO:0001741; C:XY body; IDA:MGI.
GO:0003684; F:damaged DNA binding; IDA:MGI.
GO:0000724; P:double-strand break repair via homologous recombination; IMP:MGI.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.::GO:0007283; P:spermatogenesis; IMP:MGI.
33P16104    143   H2AX_HUMAN Histone H2A.x OS=Homo sapiens (Hum...910.0001     42.7     26     45GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000786; C:nucleosome; NAS:UniProtKB.
GO:0003677; F:DNA binding; NAS:UniProtKB.::GO:0019899; F:enzyme binding; IPI:UniProtKB.::GO:0042393; F:histone binding; IPI:UniProtKB.
GO:0000077; P:DNA damage checkpoint; IDA:UniProtKB.::GO:0000724; P:double-strand break repair via homologous recombination; TAS:Reactome.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; NAS:UniProtKB.::GO:0045739; P:positive regulation of DNA repair; NAS:UniProtKB.::GO:0010212; P:response to ionizing radiation; NAS:UniProtKB.
34Q6WV88    125   H2A_MYTGA Histone H2A OS=Mytilus galloprovinc...900.0001     42.4     24     47GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
35Q8I0T3    125   H2A_MYTED Histone H2A OS=Mytilus edulis (Blue...900.0001     42.4     24     47GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
36Q6WV69    125   H2A_MYTCH Histone H2A OS=Mytilus chilensis (C...900.0001     42.4     24     47GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
37Q6WV66    125   H2A_MYTCA Histone H2A OS=Mytilus californianu...900.0001     42.4     24     47GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
38P02268    125   H2A_SEPOF Histone H2A OS=Sepia officinalis (C...910.0001     42.4     24     45GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
39Q6GM86    139   H2AX_XENLA Histone H2A.x OS=Xenopus laevis (A...910.0001     42.4     25     45GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
40Q64522    130   H2A2B_MOUSE Histone H2A type 2-B OS=Mus muscu...910.0001     42.4     25     45GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
41P06897    130   H2A1_XENLA Histone H2A type 1 OS=Xenopus laev...950.0001     42.4     25     45GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
42Q6PV61    123   H2A_LITVA Histone H2A OS=Litopenaeus vannamei...910.0001     42     24     45GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0042742; P:defense response to bacterium; IDA:UniProtKB.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
43Q4PEF9    136   H2A_USTMA Histone H2A OS=Ustilago maydis (str...860.0002     42.4     26     47GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
44Q8IUE6    130   H2A2B_HUMAN Histone H2A type 2-B OS=Homo sapi...910.0002     42     25     45GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
45P19178    124   H2A_PLADU Histone H2A OS=Platynereis dumerili...910.0002     41.6     24     45GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
46Q9FGP7    202   NFYC6_ARATH Nuclear transcription factor Y su...1210.0002     42.7     25     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
47P35061    125   H2A_ACRFO Histone H2A OS=Acropora formosa (St...910.0002     41.6     24     45GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
48P02269    125   H2A_ASTRU Histone H2A OS=Asterias rubens (Com...910.0002     41.6     25     44GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
49Q7ZUY3    142   H2AX_DANRE Histone H2A.x OS=Danio rerio (Zebr...910.0002     42     25     45GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
50P13630    124   H2A_PARLI Histone H2A OS=Paracentrotus lividu...910.0002     41.6     25     44GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
51P16886    126   H2AL_STRPU Late histone H2A.L3 OS=Strongyloce...900.0003     41.2     26     44GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
52P04736    124   H2A2_PSAMI Late histone H2A.2.1 OS=Psammechin...900.0003     41.2     24     46GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
53P02264    128   H2A_ONCMY Histone H2A OS=Oncorhynchus mykiss ...910.0003     41.2     25     45GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0042742; P:defense response to bacterium; IEA:UniProtKB-KW.::GO:0050832; P:defense response to fungus; IEA:UniProtKB-KW.::GO:0031640; P:killing of cells of other organism; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
54P69141    124   H2A_STRPU Histone H2A, embryonic OS=Strongylo...910.0003     41.2     25     44GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
55P69142    124   H2AE_PSAMI Histone H2A, embryonic OS=Psammech...910.0003     41.2     25     44GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
56P27325    125   H2A_URECA Histone H2A OS=Urechis caupo (Innke...910.0003     41.2     23     45GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
57P02270    124   H2A_SIPNU Histone H2A OS=Sipunculus nudus (Ma...910.0003     41.2     23     45GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
58P04735    125   H2A1_PSAMI Late histone H2A.1 OS=Psammechinus...910.0004     41.2     25     44GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
59P21896    125   H2A_CHITH Histone H2A OS=Chironomus thummi th...910.0005     40.8     24     45GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
60Q07135    125   H2AO_CHITH Histone H2A, orphon OS=Chironomus ...910.0005     40.8     23     45GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
61Q4PSE2    187   NFYC8_ARATH Nuclear transcription factor Y su...1030.0005     41.6     27     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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