Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YER159C
Length:
440
Number of sequences:
5887
Description:
YER159C-A YER159C-A SGDID:S000007403, Chr V from 498124-496802, Genome Release 64-1-1, reverse complement, transposable_element_gene, "Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
241A3GHC1    132   H2AZ_PICST Histone H2A.Z OS=NRRL Y-11545) (Ye...731.7     31.2     27     52GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
242Q6BQE9    132   H2AZ_DEBHA Histone H2A.Z OS=0083 / IGC 2968) ...731.8     31.2     27     52GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
243P08985    141   H2AV_DROME Histone H2A.v OS=Drosophila melano...781.8     31.2     26     47GO:0005811; C:lipid particle; IDA:FlyBase.::GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:FlyBase.::GO:0005700; C:polytene chromosome; IDA:FlyBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
244Q8S857    139   H2AV2_ORYSJ Probable histone H2A variant 2 OS...822.4     30.8     26     45GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
245Q6YNC8    128   H2AZ_SHEEP Histone H2A.Z OS=Ovis aries (Sheep...732.7     30.8     26     49GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
246P0C0S7    128   H2AZ_RAT Histone H2A.Z OS=Rattus norvegicus (...732.7     30.8     26     49GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
247Q5RC42    128   H2AZ_PONAB Histone H2A.Z OS=Pongo abelii (Sum...732.7     30.8     26     49GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
248P22647    128   H2AZ_ONCMY Histone H2A.Z OS=Oncorhynchus myki...732.7     30.8     26     49GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
249P0C0S6    128   H2AZ_MOUSE Histone H2A.Z OS=Mus musculus (Mou...732.7     30.8     26     49GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:MGI.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
250P0C0S5    128   H2AZ_HUMAN Histone H2A.Z OS=Homo sapiens (Hum...732.7     30.8     26     49GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:MGI.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
251P0C0S4    128   H2AZ_BOVIN Histone H2A.Z OS=Bos taurus (Bovin...732.7     30.8     26     49GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
252Q5ZMD6    128   H2AZ_CHICK Histone H2A.Z OS=Gallus gallus (Ch...732.7     30.8     26     49GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
253P27344    201   DPB3_YEAST DNA polymerase epsilon subunit C O...803     30.8     25     50GO:0008622; C:epsilon DNA polymerase complex; IDA:SGD.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003887; F:DNA-directed DNA polymerase activity; TAS:SGD.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006348; P:chromatin silencing at telomere; IMP:SGD.::GO:0006273; P:lagging strand elongation; TAS:SGD.::GO:0006272; P:leading strand elongation; TAS:SGD.::GO:0006298; P:mismatch repair; TAS:SGD.::GO:0006289; P:nucleotide-excision repair; TAS:SGD.
254A4VX29    243   XERDL_STRSY Tyrosine recombinase XerD-like OS...513.4     30.8     35     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
255A4W3D3    243   XERDL_STRS2 Tyrosine recombinase XerD-like OS...513.4     30.8     35     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
256Q5AEE1    133   H2AZ_CANAL Histone H2A.Z OS=Candida albicans ...783.5     30.4     27     49GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
257A5DQL2    133   H2AZ_PICGU Histone H2A.Z OS=1539 / NBRC 10279...783.6     30.4     26     50GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
258Q09777    481   RGS1_SCHPO Regulator of G-protein signaling 1...424.1     30.8     36     52GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0005886; C:plasma membrane; ISS:RefGenome.
GO:0005096; F:GTPase activator activity; ISS:PomBase.
GO:0035556; P:intracellular signal transduction; IEA:InterPro.::GO:0090029; P:negative regulation of pheromone-dependent signal transduction involved in conjugation with cellular fusion; IMP:PomBase.::GO:0019236; P:response to pheromone; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.::GO:0038032; P:termination of G-protein coupled receptor signaling pathway; IEA:InterPro.
259Q9VZ08    1712   RME6_DROME Receptor-mediated endocytosis prot...994.6     30.8     30     49GO:0005829; C:cytosol; ISS:UniProtKB.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0032794; F:GTPase activating protein binding; ISS:UniProtKB.::GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.::GO:0005085; F:guanyl-nucleotide exchange factor activity; ISS:UniProtKB.
GO:0006897; P:endocytosis; IEA:UniProtKB-KW.::GO:0051223; P:regulation of protein transport; ISS:UniProtKB.::GO:0051056; P:regulation of small GTPase mediated signal transduction; IEA:InterPro.::GO:0007165; P:signal transduction; IEA:InterPro.
260P08991    125   H2AV_STRPU Histone H2A.V OS=Strongylocentrotu...734.8     30     26     48GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
261Q6DER6    128   H2AZL_XENTR Histone H2A.Z-like OS=Xenopus tro...795.2     30     24     46GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
262P70094    128   H2AZL_XENLA Histone H2A.Z-like OS=Xenopus lae...795.2     30     24     46GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
263P0CO00    138   H2AZ_CRYNJ Histone H2A.Z OS=ATCC MYA-565) (Fi...735.7     30     23     48GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
264P0CO01    138   H2AZ_CRYNB Histone H2A.Z OS=(Filobasidiella n...735.7     30     23     48GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
265A7FW05    269   RNH2_CLOB1 Ribonuclease HII OS=Clostridium bo...486.6     30     31     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
266A5I4L9    269   RNH2_CLOBH Ribonuclease HII OS=Clostridium bo...486.7     30     31     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.
267P0CAK2    72   VF73R_ASFWA Uncharacterized protein I73R OS=(...478     28.5     32     55
268P06898    130   H2A2_XENLA Histone H2A type 2 OS=Xenopus laev...958.4     29.3     20     43GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
269A5DXC6    133   H2AZ_LODEL Histone H2A.Z OS=NBRC 1676 / NRRL ...738.4     29.3     27     49GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
270Q1IGZ0    335   METN2_PSEE4 Methionine import ATP-binding pro...699.1     29.6     28     57GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0015424; F:amino acid-transporting ATPase activity; IEA:InterPro.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0015821; P:methionine transport; IEA:InterPro.
271Q0UG93    139   H2AZ_PHANO Histone H2A.Z OS=(Glume blotch fun...739.4     29.3     26     48GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
records
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