Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YER159C
Length:
440
Number of sequences:
5887
Description:
YER159C-A YER159C-A SGDID:S000007403, Chr V from 498124-496802, Genome Release 64-1-1, reverse complement, transposable_element_gene, "Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
211P48003    140   H2AZ_SCHPO Histone H2A.Z OS=Schizosaccharomyc...780.3     33.5     27     50GO:0031011; C:Ino80 complex; IDA:PomBase.::GO:0005739; C:mitochondrion; IDA:PomBase.::GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0000812; C:Swr1 complex; IDA:PomBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
212P02273    138   H2AX_TETPY Histone H2A.X OS=Tetrahymena pyrif...900.32     33.5     21     41GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
213Q2GUP0    143   H2AZ_CHAGB Histone H2A.Z OS=6347 / NRRL 1970)...780.36     33.5     29     47GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
214Q8H7Y8    138   H2AV1_ORYSJ Probable histone H2A variant 1 OS...820.36     33.1     26     48GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
215O23628    136   H2AV1_ARATH Histone H2A variant 1 OS=Arabidop...810.38     33.1     27     47GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0042742; P:defense response to bacterium; IGI:TAIR.::GO:0016048; P:detection of temperature stimulus; IGI:TAIR.::GO:0009908; P:flower development; IGI:TAIR.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
216Q4IMD1    144   H2AZ_GIBZE Histone H2A.Z OS=(Wheat head bligh...780.39     33.1     29     46GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
217Q27511    140   H2AV_CAEEL Histone H2A.V OS=Caenorhabditis el...780.41     33.1     27     45GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0045132; P:meiotic chromosome segregation; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006334; P:nucleosome assembly; IEA:InterPro.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0016246; P:RNA interference; IMP:WormBase.
218Q09FM9    136   H2AZ_MONPU Histone H2A.Z OS=Monascus purpureu...740.46     33.1     28     50GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
219A2R702    138   H2AZ_ASPNC Histone H2A.Z OS=Aspergillus niger...740.49     32.7     28     50GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
220Q2UJ80    138   H2AZ_ASPOR Histone H2A.Z OS=Aspergillus oryza...740.5     32.7     28     50GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
221A1C5F1    138   H2AZ_ASPCL Histone H2A.Z OS=3887 / NRRL 1). G...740.5     32.7     28     50GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
222A1D0C1    138   H2AZ_NEOFI Histone H2A.Z OS=181) (Aspergillus...740.57     32.7     28     50GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
223Q4WE68    138   H2AZ_ASPFU Histone H2A.Z OS=A1100) (Aspergill...740.57     32.7     28     50GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
224Q5AUJ1    136   H2AZ_EMENI Histone H2A.Z OS=194 / M139) (Aspe...740.62     32.7     28     50GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
225Q1DTG2    138   H2AZ_COCIM Histone H2A.Z OS=Coccidioides immi...740.84     32.3     27     50GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
226Q9SII0    136   H2AV2_ARATH Probable histone H2A variant 2 OS...820.85     32.3     27     46GO:0005730; C:nucleolus; IDA:TAIR.::GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.::GO:0009909; P:regulation of flower development; IGI:TAIR.
227Q5BJ65    128   H2AV_XENTR Histone H2A.V OS=Xenopus tropicali...730.98     32     27     49GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
228Q6GM74    128   H2AV_XENLA Histone H2A.V OS=Xenopus laevis (A...730.98     32     27     49GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
229Q6Y237    128   H2AV_PAGMA Histone H2A.V OS=Pagrus major (Red...730.98     32     27     49GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
230Q3THW5    128   H2AV_MOUSE Histone H2A.V OS=Mus musculus (Mou...730.98     32     27     49GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
231Q71UI9    128   H2AV_HUMAN Histone H2A.V OS=Homo sapiens (Hum...730.98     32     27     49GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
232Q71PD7    128   H2AV_DANRE Histone H2A.V OS=Danio rerio (Zebr...730.98     32     27     49GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
233P02272    128   H2AV_CHICK Histone H2A.V OS=Gallus gallus (Ch...730.98     32     27     49GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
234Q32LA7    128   H2AV_BOVIN Histone H2A.V OS=Bos taurus (Bovin...730.98     32     27     49GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
235O62695    128   H2AV_RABIT Histone H2A.V OS=Oryctolagus cunic...731.1     32     27     49GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
236Q43214    148   H2A6_WHEAT Protein H2A.6 OS=Triticum aestivum...861.1     32     22     41GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
237Q9NR33    117   DPOE4_HUMAN DNA polymerase epsilon subunit 4 ...741.2     31.6     26     45GO:0005671; C:Ada2/Gcn5/Ada3 transcription activator complex; IDA:BHF-UCL.
GO:0003887; F:DNA-directed DNA polymerase activity; TAS:ProtInc.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
GO:0043966; P:histone H3 acetylation; IDA:BHF-UCL.
238A6QQ14    116   DPOE4_BOVIN DNA polymerase epsilon subunit 4 ...741.3     31.6     26     45
GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
239Q9CQ36    118   DPOE4_MOUSE DNA polymerase epsilon subunit 4 ...741.5     31.2     26     45
GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
240Q0C919    138   H2AZ_ASPTN Histone H2A.Z OS=Aspergillus terre...741.5     31.6     28     49GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
241A3GHC1    132   H2AZ_PICST Histone H2A.Z OS=NRRL Y-11545) (Ye...731.7     31.2     27     52GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
records
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