Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YER159C
Length:
440
Number of sequences:
5887
Description:
YER159C-A YER159C-A SGDID:S000007403, Chr V from 498124-496802, Genome Release 64-1-1, reverse complement, transposable_element_gene, "Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
181Q9C681    132   H2A1_ARATH Probable histone H2A.1 OS=Arabidop...860.06     35.4     22     43GO:0005618; C:cell wall; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.::GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
182Q9C944    134   H2AV3_ARATH Probable histone H2A variant 3 OS...880.066     35.4     26     45GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005773; C:vacuole; IDA:TAIR.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0042742; P:defense response to bacterium; IGI:TAIR.::GO:0006334; P:nucleosome assembly; IEA:InterPro.::GO:0009909; P:regulation of flower development; IGI:TAIR.::GO:0009266; P:response to temperature stimulus; IGI:TAIR.
183Q9S9K7    142   H2AXB_ARATH Probable histone H2AXb OS=Arabido...860.07     35.4     22     43GO:0005730; C:nucleolus; IDA:TAIR.::GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
184Q9QZQ8    372   H2AY_MOUSE Core histone macro-H2A.1 OS=Mus mu...850.077     35.8     22     46GO:0005813; C:centrosome; TAS:MGI.::GO:0000793; C:condensed chromosome; IDA:MGI.::GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
185O75367    372   H2AY_HUMAN Core histone macro-H2A.1 OS=Homo s...850.077     35.8     22     46GO:0001740; C:Barr body; IDA:MGI.::GO:0000786; C:nucleosome; NAS:UniProtKB.
GO:0003677; F:DNA binding; NAS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0007549; P:dosage compensation; IDA:MGI.::GO:0006334; P:nucleosome assembly; NAS:UniProtKB.
186P19177    149   H2A_PETCR Histone H2A OS=Petroselinum crispum...860.078     35.4     24     41GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
187P25469    146   H2A1_SOLLC Histone H2A.1 OS=Solanum lycopersi...860.083     35     22     42GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
188Q6L500    163   H2A4_ORYSJ Probable histone H2A.4 OS=Oryza sa...860.085     35.4     23     42GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
189A2Y5G8    163   H2A4_ORYSI Probable histone H2A.4 OS=Oryza sa...860.085     35.4     23     42GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
190O93327    372   H2AY_CHICK Core histone macro-H2A.1 OS=Gallus...850.087     35.8     22     46GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
191Q02874    371   H2AY_RAT Core histone macro-H2A.1 OS=Rattus n...850.09     35.4     22     46GO:0000786; C:nucleosome; IDA:RGD.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
192Q8LLP5    137   H2AXA_ORYSJ Probable histone H2AXa OS=Oryza s...860.1     34.7     22     43GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
193A2XLI0    137   H2AXA_ORYSI Probable histone H2AXa OS=Oryza s...860.1     34.7     22     43GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
194P40280    159   H2A_MAIZE Histone H2A OS=Zea mays (Maize). GN...860.11     35     24     41GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
195Q9P0M6    372   H2AW_HUMAN Core histone macro-H2A.2 OS=Homo s...850.12     35.4     22     46GO:0001740; C:Barr body; IDA:MGI.::GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0007549; P:dosage compensation; IDA:MGI.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
196P35065    133   H2A1_TETTS Histone H2A.1 OS=Tetrahymena therm...900.13     34.3     21     41GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
197P02277    151   H2A3_WHEAT Histone H2A.2.2 OS=Triticum aestiv...860.13     34.7     22     42GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
198Q8CCK0    372   H2AW_MOUSE Core histone macro-H2A.2 OS=Mus mu...850.14     35     22     46GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
199Q9FGP8    212   NFYC7_ARATH Nuclear transcription factor Y su...540.15     34.7     28     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
200P02275    146   H2A1_WHEAT Histone H2A.1 OS=Triticum aestivum...900.16     34.3     22     41GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
201P02274    133   H2A1_TETPY Histone H2A.1 OS=Tetrahymena pyrif...900.16     34.3     21     41GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
202Q84MP7    137   H2AV3_ORYSJ Probable histone H2A variant 3 OS...820.19     33.9     27     49GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
203Q43213    145   H2A5_WHEAT Protein H2A.5 OS=Triticum aestivum...900.19     34.3     22     41GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
204P16866    129   H2A4_VOLCA Histone H2A-IV OS=Volvox carteri (...860.19     33.9     22     43GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
205Q6C341    140   H2AZ_YARLI Histone H2A.Z OS=lipolytica). GN=H...790.2     33.9     28     47GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
206P35064    138   H2AX_TETTS Histone H2A.X OS=Tetrahymena therm...900.21     33.9     22     41GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
207P16865    129   H2A3_VOLCA Histone H2A-III OS=Volvox carteri ...860.21     33.9     22     43GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
208A4QVR2    142   H2AZ_MAGO7 Histone H2A.Z OS=blast fungus) (Py...780.23     33.9     29     47GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
209Q873G4    143   H2AZ_NEUCR Histone H2A.Z OS=1257 / FGSC 987)....780.27     33.9     29     47GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
210P50567    129   H2A_CHLRE Histone H2A OS=Chlamydomonas reinha...860.3     33.5     22     43GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
211P48003    140   H2AZ_SCHPO Histone H2A.Z OS=Schizosaccharomyc...780.3     33.5     27     50GO:0031011; C:Ino80 complex; IDA:PomBase.::GO:0005739; C:mitochondrion; IDA:PomBase.::GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0000812; C:Swr1 complex; IDA:PomBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
records
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