Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YER159C
Length:
440
Number of sequences:
5887
Description:
YER159C-A YER159C-A SGDID:S000007403, Chr V from 498124-496802, Genome Release 64-1-1, reverse complement, transposable_element_gene, "Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
151Q74ZL4    131   H2A1_ASHGO Histone H2A.1 OS=Y-1056) (Yeast) (...850.013     37     24     46GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
152Q6CK59    130   H2A_KLULA Histone H2A OS=1267 / NRRL Y-1140 /...850.014     37     24     46GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
153Q757L4    131   H2A2_ASHGO Histone H2A.2 OS=Y-1056) (Yeast) (...850.015     37     24     46GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
154Q9NRG0    131   CHRC1_HUMAN Chromatin accessibility complex p...760.016     37     25     47GO:0008623; C:chromatin accessibility complex; NAS:UniProtKB.::GO:0008622; C:epsilon DNA polymerase complex; NAS:UniProtKB.
GO:0003887; F:DNA-directed DNA polymerase activity; NAS:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
GO:0006338; P:chromatin remodeling; NAS:UniProtKB.
155Q2HU65    153   H2A2_MEDTR Probable histone H2A.2 OS=Medicago...900.019     37     23     41GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
156Q94F49    150   H2A5_ARATH Probable histone H2A.5 OS=Arabidop...860.02     37     24     41GO:0005730; C:nucleolus; IDA:TAIR.::GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
157Q9LHQ5    132   H2A2_ARATH Probable histone H2A.2 OS=Arabidop...900.021     36.6     22     42GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
158Q9FJE8    150   H2A7_ARATH Probable histone H2A.7 OS=Arabidop...860.022     37     24     42GO:0005730; C:nucleolus; IDA:TAIR.::GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0009506; C:plasmodesma; IDA:TAIR.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
159Q6ZL42    135   H2A2_ORYSJ Probable histone H2A.2 OS=Oryza sa...860.024     36.6     22     43GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
160A2YMC6    135   H2A2_ORYSI Probable histone H2A.2 OS=Oryza sa...860.024     36.6     22     43GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
161Q6CLM5    166   DPB3_KLULA DNA polymerase epsilon subunit C O...760.025     37     33     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
162Q9M531    153   H2A_EUPES Histone H2A OS=Euphorbia esula (Lea...860.025     36.6     23     42GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
163Q75L11    156   H2A6_ORYSJ Probable histone H2A.6 OS=Oryza sa...860.027     36.6     24     42GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
164A2XZN0    156   H2A6_ORYSI Probable histone H2A.6 OS=Oryza sa...860.027     36.6     24     42GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
165Q64598    130   H2A1F_RAT Histone H2A type 1-F OS=Rattus norv...910.028     36.2     24     43GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
166Q6BX14    277   DPB3_DEBHA DNA polymerase epsilon subunit C O...850.03     37     25     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
167Q94E96    159   H2A5_ORYSJ Probable histone H2A.5 OS=Oryza sa...860.032     36.6     23     42GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
168A2WQG7    159   H2A5_ORYSI Probable histone H2A.5 OS=Oryza sa...860.032     36.6     23     42GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
169P02276    151   H2A2_WHEAT Histone H2A.2.1 OS=Triticum aestiv...860.033     36.2     23     42GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
170Q2HU68    148   H2A1_MEDTR Probable histone H2A.1 OS=Medicago...900.034     36.2     23     41GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
171Q2QPG9    138   H2AXB_ORYSJ Probable histone H2AXb OS=Oryza s...860.038     35.8     22     43GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
172A2ZL69    138   H2AXB_ORYSI Probable histone H2AXb OS=Oryza s...860.038     35.8     22     43GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
173Q9LZ46    153   H2A4_ARATH Probable histone H2A.4 OS=Arabidop...860.039     36.2     23     43GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
174O81826    131   H2A3_ARATH Probable histone H2A.3 OS=Arabidop...860.039     35.8     22     43GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
175Q9LD28    130   H2A6_ARATH Histone H2A.6 OS=Arabidopsis thali...860.04     35.8     22     43GO:0005730; C:nucleolus; IDA:TAIR.::GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0009294; P:DNA mediated transformation; IMP:TAIR.::GO:0006334; P:nucleosome assembly; IEA:InterPro.::GO:0009617; P:response to bacterium; IEP:TAIR.::GO:0009611; P:response to wounding; IEP:TAIR.
176O65759    139   H2AX_CICAR Histone H2AX OS=Cicer arietinum (C...860.041     35.8     22     43GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
177O04848    142   H2AXA_ARATH Probable histone H2AXa OS=Arabido...860.047     35.8     22     44GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
178P35063    138   H2AX_PICAB Histone H2AX OS=Picea abies (Norwa...860.053     35.4     22     43GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
179Q43312    134   H2A7_WHEAT Protein H2A.7 OS=Triticum aestivum...860.056     35.4     22     43GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
180P40281    149   H2A2_PEA Histone H2A.2 OS=Pisum sativum (Gard...900.056     35.8     23     41GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
181Q9C681    132   H2A1_ARATH Probable histone H2A.1 OS=Arabidop...860.06     35.4     22     43GO:0005618; C:cell wall; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.::GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
records
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