Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YER159C
Length:
440
Number of sequences:
5887
Description:
YER159C-A YER159C-A SGDID:S000007403, Chr V from 498124-496802, Genome Release 64-1-1, reverse complement, transposable_element_gene, "Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
121A9UMV8    129   H2AJ_RAT Histone H2A.J OS=Rattus norvegicus (...910.004     38.5     25     44GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
122Q8R1M2    129   H2AJ_MOUSE Histone H2A.J OS=Mus musculus (Mou...910.004     38.5     25     44GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
123Q8CGP5    130   H2A1F_MOUSE Histone H2A type 1-F OS=Mus muscu...910.004     38.5     25     44GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
124P40282    132   H2A_PLAFA Histone H2A OS=Plasmodium falciparu...860.004     38.5     23     44GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
125A5DWF1    130   H2A1_LODEL Histone H2A.1 OS=NBRC 1676 / NRRL ...850.004     38.5     25     46GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
126Q8CGP6    128   H2A1H_MOUSE Histone H2A type 1-H OS=Mus muscu...910.004     38.1     25     44GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
127Q59SU5    132   H2A1_CANAL Histone H2A.1 OS=Candida albicans ...850.004     38.5     25     46GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IDA:CGD.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
128P20671    130   H2A1D_HUMAN Histone H2A type 1-D OS=Homo sapi...910.005     38.1     25     44GO:0000786; C:nucleosome; NAS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; NAS:UniProtKB.
GO:0006334; P:nucleosome assembly; NAS:UniProtKB.
129Q6FWM7    131   H2A1_CANGA Histone H2A.1 OS=NRRL Y-65) (Yeast...850.005     38.1     24     46GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
130Q4FZT6    130   H2A3_RAT Histone H2A type 3 OS=Rattus norvegi...910.005     38.1     25     44GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
131Q8BFU2    130   H2A3_MOUSE Histone H2A type 3 OS=Mus musculus...910.005     38.1     25     44GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
132Q7L7L0    130   H2A3_HUMAN Histone H2A type 3 OS=Homo sapiens...910.005     38.1     25     44GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
133Q8CGP7    130   H2A1K_MOUSE Histone H2A type 1-K OS=Mus muscu...910.005     38.1     25     44GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
134P22752    130   H2A1_MOUSE Histone H2A type 1 OS=Mus musculus...910.005     38.1     25     44GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
135P04908    130   H2A1B_HUMAN Histone H2A type 1-B/E OS=Homo sa...910.005     38.1     25     44GO:0000786; C:nucleosome; NAS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; NAS:UniProtKB.
GO:0006334; P:nucleosome assembly; NAS:UniProtKB.
136Q2QS71    135   H2A7_ORYSJ Probable histone H2A.7 OS=Oryza sa...850.006     38.1     24     44GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
137A2ZK29    135   H2A7_ORYSI Probable histone H2A.7 OS=Oryza sa...850.006     38.1     24     44GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
138A2ZK26    135   H2A8_ORYSI Probable histone H2A.8 OS=Oryza sa...850.006     38.1     24     44GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
139Q6FM31    131   H2A2_CANGA Histone H2A.2 OS=NRRL Y-65) (Yeast...850.006     37.7     24     46GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
140Q6ZL43    135   H2A1_ORYSJ Probable histone H2A.1 OS=Oryza sa...850.006     38.1     24     44GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
141A2YMC5    135   H2A1_ORYSI Probable histone H2A.1 OS=Oryza sa...850.006     38.1     24     44GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
142Q43208    135   H2A4_WHEAT Histone H2A.4 OS=Triticum aestivum...850.007     38.1     24     44GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
143P35062    129   H2A3_CHICK Histone H2A-III OS=Gallus gallus (...910.007     37.7     25     44GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
144Q1S053    152   H2A3_MEDTR Probable histone H2A.3 OS=Medicago...900.008     38.1     24     41GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
145P09589    112   H2A3_LYTPI Histone H2A, sperm OS=Lytechinus p...950.009     37.4     23     42GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
146P04912    132   H2A2_YEAST Histone H2A.2 OS=Saccharomyces cer...850.01     37.4     24     46GO:0000788; C:nuclear nucleosome; TAS:SGD.::GO:0031298; C:replication fork protection complex; IDA:SGD.
GO:0003677; F:DNA binding; TAS:SGD.
GO:0006281; P:DNA repair; IMP:SGD.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
147P04911    132   H2A1_YEAST Histone H2A.1 OS=Saccharomyces cer...850.01     37.4     24     46GO:0000788; C:nuclear nucleosome; TAS:SGD.::GO:0031298; C:replication fork protection complex; IDA:SGD.
GO:0003677; F:DNA binding; TAS:SGD.
GO:0006281; P:DNA repair; IMP:SGD.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
148Q84NJ4    134   H2A3_ORYSJ Probable histone H2A.3 OS=Oryza sa...860.012     37.4     22     43GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
149A2YVE5    134   H2A3_ORYSI Probable histone H2A.3 OS=Oryza sa...860.012     37.4     22     43GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
150P09590    88   H2A3_STRPU Histone H2A-beta, sperm OS=Strongy...780.012     36.2     27     44GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334; P:nucleosome assembly; IEA:InterPro.
151Q74ZL4    131   H2A1_ASHGO Histone H2A.1 OS=Y-1056) (Yeast) (...850.013     37     24     46GO:0000786; C:nucleosome; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro.
records
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