Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YER107C
Length:
365
Number of sequences:
5887
Description:
YER107C GLE2 SGDID:S000000909, Chr V from 374545-373448, Genome Release 64-1-1, reverse complement, Verified ORF, "Component of the Nup82 subcomplex of the nuclear pore complex; required for polyadenylated RNA export but not for protein import; homologous to S. pombe Rae1p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P40066    365   GLE2_YEAST Nucleoporin GLE2 OS=Saccharomyces ...3650     770     100     100GO:0005737; C:cytoplasm; IDA:SGD.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0055126; C:Nup82 complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0031081; P:nuclear pore distribution; IMP:SGD.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:SGD.::GO:0000973; P:posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery; IMP:SGD.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:2000728; P:regulation of mRNA export from nucleus in response to heat stress; IMP:SGD.
2P41838    352   RAE1_SCHPO Poly(A)+ RNA export protein OS=Sch...3668e-126     372     51     66GO:0055126; C:Nup82 complex; ISS:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:PomBase.::GO:0006606; P:protein import into nucleus; TAS:PomBase.::GO:0010389; P:regulation of G2/M transition of mitotic cell cycle; IMP:PomBase.::GO:0000054; P:ribosomal subunit export from nucleus; ISS:PomBase.
3Q38942    349   RAE1L_ARATH Rae1-like protein At1g80670 OS=Ar...3553e-92     286     42     58GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005635; C:nuclear envelope; IDA:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.
4Q5FVA9    368   RAE1L_XENTR mRNA export factor OS=Xenopus tro...3464e-92     287     44     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
5Q7ZWF0    368   RAE1L_DANRE mRNA export factor OS=Danio rerio...3764e-91     284     41     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
6Q5RF99    368   RAEL1_PONAB mRNA export factor OS=Pongo abeli...3796e-90     281     41     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
7P78406    368   RAE1L_HUMAN mRNA export factor OS=Homo sapien...3796e-90     281     41     57GO:0005737; C:cytoplasm; TAS:ProtInc.::GO:0005856; C:cytoskeleton; TAS:ProtInc.::GO:0005640; C:nuclear outer membrane; TAS:ProtInc.::GO:0005643; C:nuclear pore; TAS:ProtInc.
GO:0008017; F:microtubule binding; ISS:UniProtKB.::GO:0003723; F:RNA binding; TAS:ProtInc.
GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0015758; P:glucose transport; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:ProtInc.::GO:0010827; P:regulation of glucose transport; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0055085; P:transmembrane transport; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
8A5GFN6    368   RAEL1_PIG mRNA export factor OS=Sus scrofa (P...3798e-89     278     42     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
9Q4R6D2    368   RAE1L_MACFA mRNA export factor OS=Macaca fasc...3791e-88     278     41     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
10Q8C570    368   RAE1L_MOUSE mRNA export factor OS=Mus musculu...3463e-87     274     42     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0071407; P:cellular response to organic cyclic compound; IDA:MGI.
11Q3SWS8    368   RAE1L_RAT mRNA export factor OS=Rattus norveg...3465e-87     274     42     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
12Q5E9A4    368   RAE1L_BOVIN mRNA export factor OS=Bos taurus ...3465e-87     274     42     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
13Q93454    373   NPP17_CAEEL Nucleoporin-17 OS=Caenorhabditis ...3759e-73     237     35     54GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0040013; P:negative regulation of locomotion; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.
14Q9WVA3    326   BUB3_MOUSE Mitotic checkpoint protein BUB3 OS...3382e-60     203     35     52GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0000070; P:mitotic sister chromatid segregation; IMP:MGI.::GO:0051983; P:regulation of chromosome segregation; IDA:UniProtKB.::GO:0071173; P:spindle assembly checkpoint; IDA:UniProtKB.
15Q1JQB2    326   BUB3_BOVIN Mitotic checkpoint protein BUB3 OS...3382e-60     203     35     52GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0051983; P:regulation of chromosome segregation; ISS:UniProtKB.::GO:0071173; P:spindle assembly checkpoint; ISS:UniProtKB.
16O43684    328   BUB3_HUMAN Mitotic checkpoint protein BUB3 OS...3382e-60     203     35     52GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005634; C:nucleus; IDA:HPA.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; TAS:Reactome.::GO:0008608; P:attachment of spindle microtubules to kinetochore; IDA:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0007094; P:mitotic cell cycle spindle assembly checkpoint; TAS:Reactome.::GO:0000236; P:mitotic prometaphase; TAS:Reactome.::GO:0051436; P:negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.
17Q5RB58    328   BUB3_PONAB Mitotic checkpoint protein BUB3 OS...3381e-59     201     34     52GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0051983; P:regulation of chromosome segregation; ISS:UniProtKB.::GO:0071173; P:spindle assembly checkpoint; ISS:UniProtKB.
18Q54DM1    331   BUB3_DICDI Mitotic checkpoint protein bub3 OS...3331e-52     183     34     53GO:0000776; C:kinetochore; ISS:dictyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007093; P:mitotic cell cycle checkpoint; ISS:dictyBase.
19O42860    320   BUB3_SCHPO Mitotic checkpoint protein bub3 OS...2968e-48     170     30     52GO:0000778; C:condensed nuclear chromosome kinetochore; IDA:PomBase.::GO:0033597; C:mitotic checkpoint complex; ISS:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0034613; P:cellular protein localization; IGI:PomBase.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007094; P:mitotic cell cycle spindle assembly checkpoint; IMP:PomBase.
20P26449    341   BUB3_YEAST Cell cycle arrest protein BUB3 OS=...2985e-20     92.8     26     42GO:0000778; C:condensed nuclear chromosome kinetochore; IPI:SGD.::GO:0033597; C:mitotic checkpoint complex; IDA:SGD.
GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0070683; P:mitotic cell cycle G2/M transition decatenation checkpoint; IGI:SGD.::GO:0007094; P:mitotic cell cycle spindle assembly checkpoint; TAS:SGD.
21A1L112    384   WDR55_RAT WD repeat-containing protein 55 OS=...3280.00000000000003     76.6     25     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0006364; P:rRNA processing; ISS:UniProtKB.
22Q9CX97    388   WDR55_MOUSE WD repeat-containing protein 55 O...3300.0000000000003     74.3     24     39GO:0005737; C:cytoplasm; IMP:UniProtKB.::GO:0005730; C:nucleolus; IMP:UniProtKB.
GO:0006364; P:rRNA processing; IMP:UniProtKB.
23Q9H6Y2    383   WDR55_HUMAN WD repeat-containing protein 55 O...3350.000000000001     72     24     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0006364; P:rRNA processing; ISS:UniProtKB.
24Q58DT8    382   WDR55_BOVIN WD repeat-containing protein 55 O...3250.000000000005     70.1     25     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0006364; P:rRNA processing; ISS:UniProtKB.
25P69104    318   GBLP_TRYBR Guanine nucleotide-binding protein...780.45     35.8     28     59
26P69103    318   GBLP_TRYBB Guanine nucleotide-binding protein...780.45     35.8     28     59
27Q5R9T6    383   WDR55_PONAB WD repeat-containing protein 55 O...3190.00000000006     67     24     37GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0006364; P:rRNA processing; ISS:UniProtKB.
28P49695    742   PKWA_THECU Probable serine/threonine-protein ...811.5     34.7     30     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
29Q54Y96    530   SMU1_DICDI WD40 repeat-containing protein smu...2820.0000000008     63.9     24     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
30Q9BVA0    655   KTNB1_HUMAN Katanin p80 WD40-containing subun...1260.000000001     63.5     31     55GO:0008352; C:katanin complex; TAS:UniProtKB.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IDA:HPA.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0008017; F:microtubule binding; NAS:UniProtKB.::GO:0046982; F:protein heterodimerization activity; IPI:UniProtKB.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007026; P:negative regulation of microtubule depolymerization; IMP:UniProtKB.::GO:0031117; P:positive regulation of microtubule depolymerization; IMP:UniProtKB.::GO:0006605; P:protein targeting; NAS:UniProtKB.
31Q8BG40    658   KTNB1_MOUSE Katanin p80 WD40-containing subun...1260.000000001     63.5     31     55GO:0030424; C:axon; IDA:MGI.::GO:0005813; C:centrosome; IDA:MGI.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0045502; F:dynein binding; IDA:MGI.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
records
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