Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YER107C
Length:
365
Number of sequences:
5887
Description:
YER107C GLE2 SGDID:S000000909, Chr V from 374545-373448, Genome Release 64-1-1, reverse complement, Verified ORF, "Component of the Nup82 subcomplex of the nuclear pore complex; required for polyadenylated RNA export but not for protein import; homologous to S. pombe Rae1p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
361P41318    303   LST8_YEAST Target of rapamycin complex subuni...2615     32.7     21     38GO:0010008; C:endosome membrane; IDA:SGD.::GO:0031234; C:extrinsic to internal side of plasma membrane; IDA:SGD.::GO:0000139; C:Golgi membrane; IDA:SGD.::GO:0000300; C:peripheral to membrane of membrane fraction; IDA:SGD.::GO:0031931; C:TORC1 complex; IPI:SGD.::GO:0031932; C:TORC2 complex; IPI:SGD.::GO:0005774; C:vacuolar membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030295; F:protein kinase activator activity; IMP:SGD.
GO:0030950; P:establishment or maintenance of actin cytoskeleton polarity; IMP:SGD.::GO:0031505; P:fungal-type cell wall organization; IMP:SGD.::GO:0031930; P:mitochondria-nucleus signaling pathway; IMP:SGD.::GO:0031929; P:TOR signaling cascade; IMP:SGD.::GO:0006810; P:transport; IMP:SGD.
362O43172    522   PRP4_HUMAN U4/U6 small nuclear ribonucleoprot...1500.11     38.1     24     45GO:0015030; C:Cajal body; IDA:BHF-UCL.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; NAS:UniProtKB.::GO:0071001; C:U4/U6 snRNP; IDA:BHF-UCL.
GO:0005515; F:protein binding; IPI:BHF-UCL.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:BHF-UCL.
363A4RJV3    661   MDV1_MAGO7 Mitochondrial division protein 1 O...1060.68     35.8     22     48GO:0030015; C:CCR4-NOT core complex; ISS:PAMGO_MGG.::GO:0005741; C:mitochondrial outer membrane; ISS:PAMGO_MGG.
GO:0051020; F:GTPase binding; ISS:PAMGO_MGG.
GO:0000266; P:mitochondrial fission; ISS:PAMGO_MGG.::GO:0000002; P:mitochondrial genome maintenance; ISS:PAMGO_MGG.::GO:0006402; P:mRNA catabolic process; ISS:PAMGO_MGG.::GO:0006355; P:regulation of transcription, DNA-dependent; ISS:PAMGO_MGG.::GO:0006354; P:transcription elongation, DNA-dependent; ISS:PAMGO_MGG.::GO:0006352; P:transcription initiation, DNA-dependent; ISS:PAMGO_MGG.
364Q2HJH6    358   SNR40_BOVIN U5 small nuclear ribonucleoprotei...1030.039     39.3     24     50GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
365Q5NVD0    521   PRP4_PONAB U4/U6 small nuclear ribonucleoprot...1500.12     38.1     24     45GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
366Q8BHJ5    514   TBL1R_MOUSE F-box-like/WD repeat-containing p...690.02     40.4     30     55
GO:0003714; F:transcription corepressor activity; IMP:MGI.::GO:0044212; F:transcription regulatory region DNA binding; IDA:BHF-UCL.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:BHF-UCL.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
367B4KE10    506   WDR55_DROMO WD repeat-containing protein 55 h...2020.002     43.9     20     43
368A7TMF9    453   YTM1_VANPO Ribosome biogenesis protein YTM1 O...777.2     32.3     29     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
369A8IZG4    352   CIAO1_CHLRE Probable cytosolic iron-sulfur pr...1170.002     43.5     27     54
370Q9JIT3    764   TLE3_RAT Transducin-like enhancer protein 3 O...1060.002     43.9     30     47GO:0005634; C:nucleus; IDA:BHF-UCL.
GO:0005515; F:protein binding; IPI:BHF-UCL.
GO:0006355; P:regulation of transcription, DNA-dependent; IDA:RGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
371P87053    605   POF1_SCHPO F-box/WD repeat-containing protein...990.005     42.4     27     48GO:0000152; C:nuclear ubiquitin ligase complex; ISS:PomBase.::GO:0019005; C:SCF ubiquitin ligase complex; IDA:PomBase.
GO:0030674; F:protein binding, bridging; IPI:PomBase.
GO:0071276; P:cellular response to cadmium ion; IEP:PomBase.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IPI:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; IC:PomBase.
372C5FP68    674   SCONB_ARTOC Probable E3 ubiquitin ligase comp...1071.6     34.7     23     47
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
373A6R3K5    490   YTM1_AJECN Ribosome biogenesis protein YTM1 O...1400.09     38.5     25     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
374Q08122    772   TLE3_MOUSE Transducin-like enhancer protein 3...770.002     43.9     35     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:MGI.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
375Q9DAW6    521   PRP4_MOUSE U4/U6 small nuclear ribonucleoprot...1500.069     38.9     24     45GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
376Q04726    772   TLE3_HUMAN Transducin-like enhancer protein 3...770.002     43.9     35     55GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0009887; P:organ morphogenesis; TAS:ProtInc.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
377Q2H139    657   MDV1_CHAGB Mitochondrial division protein 1 O...970.01     41.6     26     52GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
378A7EKM8    458   LIS1_SCLS1 Nuclear distribution protein PAC1 ...1660.006     42     28     46GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
379Q9USN3    777   UTP13_SCHPO Probable U3 small nucleolar RNA-a...758.2     32.3     28     53GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.
380D5GBI7    452   LIS1_TUBMM Nuclear distribution protein PAC1 ...628     32     31     52GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
381Q4X0A9    696   SCONB_ASPFU Probable E3 ubiquitin ligase comp...1230.13     38.1     21     50
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
382B0XTS1    696   SCONB_ASPFC Probable E3 ubiquitin ligase comp...1230.13     38.1     21     50
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
383A8PD13    448   YTM1_COPC7 Ribosome biogenesis protein YTM1 O...1220.39     36.2     25     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
384A1DHW6    689   SCONB_NEOFI Probable E3 ubiquitin ligase comp...1230.16     37.7     21     50
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
385Q5E966    325   EIF3I_BOVIN Eukaryotic translation initiation...3100.002     43.1     21     35GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
386P73594    326   Y1409_SYNY3 Uncharacterized WD repeat-contain...2940.002     43.1     22     40GO:0030288; C:outer membrane-bounded periplasmic space; IDA:UniProtKB.
387B6QC06    452   LIS12_PENMQ Nuclear distribution protein nudF...1380.002     43.1     24     44GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
388Q54S79    942   WDR3_DICDI WD repeat-containing protein 3 hom...970.13     38.1     25     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
389Q54S59    299   WDR61_DICDI WD repeat-containing protein 61 h...1190.003     42.7     28     46
390Q1DIW7    668   MDV1_COCIM Mitochondrial division protein 1 O...1060.013     41.2     23     49GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
391Q8SQS4    556   TAF5_ENCCU Transcription initiation factor TF...1280.32     36.6     26     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
records
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