Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YER107C
Length:
365
Number of sequences:
5887
Description:
YER107C GLE2 SGDID:S000000909, Chr V from 374545-373448, Genome Release 64-1-1, reverse complement, Verified ORF, "Component of the Nup82 subcomplex of the nuclear pore complex; required for polyadenylated RNA export but not for protein import; homologous to S. pombe Rae1p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
241O15736    612   TIPD_DICDI Protein tipD OS=Dictyostelium disc...1080.013     41.2     27     51GO:0034274; C:Atg12-Atg5-Atg16 complex; ISS:dictyBase.
GO:0019776; F:Atg8 ligase activity; ISS:dictyBase.
GO:0031154; P:culmination involved in sorocarp development; IMP:dictyBase.::GO:0016236; P:macroautophagy; ISS:dictyBase.
242Q5RF51    357   SNR40_PONAB U5 small nuclear ribonucleoprotei...1390.008     41.6     23     45GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
243Q96J01    351   THOC3_HUMAN THO complex subunit 3 OS=Homo sap...1950.002     43.5     23     38GO:0000346; C:transcription export complex; IDA:UniProtKB.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0046784; P:intronless viral mRNA export from host nucleus; IDA:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
244Q9BQ67    446   GRWD1_HUMAN Glutamate-rich WD repeat-containi...1670.0002     47     25     41GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
245Q01369    316   GBLP_NEUCR Guanine nucleotide-binding protein...1180.0002     46.6     29     47
246P0CS46    712   PFS2_CRYNJ Polyadenylation factor subunit 2 O...1220.0002     47.4     26     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
247Q6CKE8    434   PRP46_KLULA Pre-mRNA-splicing factor PRP46 OS...1202.6     33.5     27     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
248P0CS47    713   PFS2_CRYNB Polyadenylation factor subunit 2 O...1220.0002     47.4     26     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
249Q99973    2627   TEP1_HUMAN Telomerase protein component 1 OS=...1200.46     36.6     30     43GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IDA:MGI.::GO:0016363; C:nuclear matrix; IDA:MGI.::GO:0005625; C:soluble fraction; ISS:UniProtKB.::GO:0005697; C:telomerase holoenzyme complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0000722; P:telomere maintenance via recombination; IDA:UniProtKB.
250Q29RH4    351   THOC3_BOVIN THO complex subunit 3 OS=Bos taur...1980.002     43.5     22     38GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
251Q5RFF8    485   NLE1_PONAB Notchless protein homolog 1 OS=Pon...608.8     32     35     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
252Q8VE80    351   THOC3_MOUSE THO complex subunit 3 OS=Mus musc...1980.002     43.5     22     38
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
253P83774    317   GBLP_CANAL Guanine nucleotide-binding protein...952.5     33.5     28     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005625; C:soluble fraction; IDA:CGD.
GO:0007155; P:cell adhesion; IMP:CGD.::GO:0030448; P:hyphal growth; IMP:CGD.::GO:0001403; P:invasive growth in response to glucose limitation; IMP:CGD.::GO:0009405; P:pathogenesis; IMP:CGD.
254O14011    488   CWF8_SCHPO Pre-mRNA-splicing factor cwf8 OS=S...1560.0002     47     26     50GO:0005829; C:cytosol; IDA:PomBase.::GO:0005635; C:nuclear envelope; IDA:PomBase.::GO:0005681; C:spliceosomal complex; TAS:PomBase.::GO:0000151; C:ubiquitin ligase complex; TAS:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004842; F:ubiquitin-protein ligase activity; TAS:PomBase.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; TAS:PomBase.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:PomBase.
255P61480    423   WDR12_RAT Ribosome biogenesis protein WDR12 O...713.6     33.1     31     48GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
256Q9GZL7    423   WDR12_HUMAN Ribosome biogenesis protein WDR12...1240.82     35.4     26     40GO:0005654; C:nucleoplasm; IDA:UniProtKB.::GO:0070545; C:PeBoW complex; IDA:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0008283; P:cell proliferation; IMP:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:UniProtKB.
257Q9NVX2    485   NLE1_HUMAN Notchless protein homolog 1 OS=Hom...609.3     32     35     48GO:0005730; C:nucleolus; IDA:HPA.
258B4PU14    499   WDR55_DROYA WD repeat-containing protein 55 h...2020.0002     47     20     43
259Q94BM7    794   SPA4_ARATH Protein SPA1-RELATED 4 OS=Arabidop...1512.3     33.9     22     46GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0004672; F:protein kinase activity; IEA:InterPro.
GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.
260Q6P2Y2    415   WDR69_XENTR Outer row dynein assembly protein...1193.8     33.1     24     45GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
261Q5F3D7    520   UTP15_CHICK U3 small nucleolar RNA-associated...1170.0002     46.6     28     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
262Q5BLX8    315   WDR83_RAT WD repeat domain-containing protein...1230.026     39.7     29     48GO:0005737; C:cytoplasm; IDA:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
263Q9DAJ4    315   WDR83_MOUSE WD repeat domain-containing prote...1230.024     39.7     28     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
264Q5ZMC3    476   WSDU1_CHICK WD repeat, SAM and U-box domain-c...1120.027     40     29     45GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
265Q07141    748   TLE4_RAT Transducin-like enhancer protein 4 O...770.0003     46.6     36     55GO:0005634; C:nucleus; IDA:RGD.
GO:0003714; F:transcription corepressor activity; NAS:RGD.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
266C1GB49    478   LIS1_PARBD Nuclear distribution protein PAC1 ...1420.046     39.3     25     44GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
267Q5ZMA2    505   PRP19_CHICK Pre-mRNA-processing factor 19 OS=...2470.015     40.8     21     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
268P54313    340   GBB2_RAT Guanine nucleotide-binding protein G...1130.092     38.1     27     46GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.::GO:0043234; C:protein complex; IDA:RGD.
GO:0005246; F:calcium channel regulator activity; IMP:RGD.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
269P62880    340   GBB2_MOUSE Guanine nucleotide-binding protein...1130.092     38.1     27     46GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; TAS:MGI.
270P62879    340   GBB2_HUMAN Guanine nucleotide-binding protein...1130.092     38.1     27     46GO:0048471; C:perinuclear region of cytoplasm; IDA:UniProtKB.::GO:0005886; C:plasma membrane; TAS:Reactome.
GO:0003924; F:GTPase activity; TAS:ProtInc.::GO:0051020; F:GTPase binding; IPI:UniProtKB.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0071377; P:cellular response to glucagon stimulus; TAS:Reactome.::GO:0006112; P:energy reserve metabolic process; TAS:Reactome.::GO:0007186; P:G-protein coupled receptor signaling pathway; TAS:ProtInc.::GO:0007268; P:synaptic transmission; TAS:Reactome.
271P11017    340   GBB2_BOVIN Guanine nucleotide-binding protein...1130.092     38.1     27     46GO:0005834; C:heterotrimeric G-protein complex; IDA:MGI.::GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.
GO:0003924; F:GTPase activity; IDA:MGI.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
records
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