rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | P34909 | 587 | NOT4_YEAST General negative regulator of tran... | 587 | 0 | 1226 | 100 | 100 | GO:0030015; C:CCR4-NOT core complex; IPI:SGD.::GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; IDA:SGD.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0031087; P:deadenylation-independent decapping of nuclear-transcribed mRNA; IMP:SGD.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IDA:SGD.::GO:0000209; P:protein polyubiquitination; IDA:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 2 | O95628 | 575 | CNOT4_HUMAN CCR4-NOT transcription complex su... | 245 | 1e-64 | 228 | 45 | 64 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; TAS:Reactome.::GO:0051865; P:protein autoubiquitination; IDA:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 3 | Q8BT14 | 575 | CNOT4_MOUSE CCR4-NOT transcription complex su... | 245 | 1e-64 | 227 | 45 | 64 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0051865; P:protein autoubiquitination; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 4 | Q09818 | 489 | YAC4_SCHPO Putative general negative regulato... | 252 | 2e-62 | 219 | 53 | 71 | GO:0030015; C:CCR4-NOT core complex; NAS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:PomBase.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; ISS:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:PomBase.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:PomBase. | 5 | Q5D7J2 | 497 | TRIM5_PAPAN Tripartite motif-containing prote... | 93 | 0.048 | 40 | 33 | 43 | GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 6 | Q8BZT2 | 735 | SH3R2_MOUSE Putative E3 ubiquitin-protein lig... | 47 | 0.058 | 40 | 40 | 55 | | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008157; F:protein phosphatase 1 binding; ISS:UniProtKB.::GO:0004864; F:protein phosphatase inhibitor activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0010923; P:negative regulation of phosphatase activity; ISS:UniProtKB. | 7 | Q498M5 | 735 | SH3R2_RAT Putative E3 ubiquitin-protein ligas... | 47 | 0.058 | 40 | 40 | 55 | | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008157; F:protein phosphatase 1 binding; ISS:UniProtKB.::GO:0004864; F:protein phosphatase inhibitor activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0010923; P:negative regulation of phosphatase activity; ISS:UniProtKB. | 8 | Q587N7 | 515 | TRIM5_CHLAE Tripartite motif-containing prote... | 93 | 0.075 | 39.7 | 31 | 40 | GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 9 | Q5C8U4 | 515 | TRIM5_CERPY Tripartite motif-containing prote... | 88 | 0.081 | 39.7 | 32 | 41 | GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 10 | Q5D7I3 | 495 | TRIM5_ERYPA Tripartite motif-containing prote... | 93 | 0.094 | 39.3 | 31 | 40 | GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 11 | Q8IWT3 | 2517 | CUL9_HUMAN Cullin-9 OS=Homo sapiens (Human). ... | 81 | 0.11 | 39.3 | 33 | 48 | GO:0031461; C:cullin-RING ubiquitin ligase complex; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0031625; F:ubiquitin protein ligase binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. | 12 | Q8TEC5 | 729 | SH3R2_HUMAN Putative E3 ubiquitin-protein lig... | 47 | 0.11 | 39.3 | 38 | 55 | | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008157; F:protein phosphatase 1 binding; IDA:UniProtKB.::GO:0004864; F:protein phosphatase inhibitor activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0010923; P:negative regulation of phosphatase activity; IDA:UniProtKB. | 13 | Q5C8U3 | 515 | TRIM5_CERTA Tripartite motif-containing prote... | 88 | 0.12 | 38.9 | 32 | 40 | GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 14 | P32849 | 1169 | RAD5_YEAST DNA repair protein RAD5 OS=Sacchar... | 54 | 0.13 | 38.9 | 37 | 52 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000790; C:nuclear chromatin; IDA:SGD. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IDA:SGD.::GO:0000400; F:four-way junction DNA binding; IDA:SGD.::GO:0009378; F:four-way junction helicase activity; IDA:SGD.::GO:0000403; F:Y-form DNA binding; IDA:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006302; P:double-strand break repair; IMP:SGD.::GO:0010994; P:free ubiquitin chain polymerization; IDA:SGD.::GO:0006301; P:postreplication repair; IDA:SGD.::GO:0000209; P:protein polyubiquitination; IDA:SGD. | 15 | Q3ZEE5 | 493 | TRIM5_HYLLA Tripartite motif-containing prote... | 86 | 0.25 | 37.7 | 31 | 42 | GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 16 | Q5C8U1 | 494 | TRIM5_SAGLB Tripartite motif-containing prote... | 87 | 0.28 | 37.7 | 33 | 41 | GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 17 | Q9FNI6 | 1029 | SM3L2_ARATH Putative SWI/SNF-related matrix-a... | 54 | 0.36 | 37.7 | 30 | 54 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0009294; P:DNA mediated transformation; IMP:TAIR.::GO:0000724; P:double-strand break repair via homologous recombination; IMP:TAIR. | 18 | Q7YRV4 | 469 | RO52_BOVIN E3 ubiquitin-protein ligase TRIM21... | 59 | 0.42 | 37 | 32 | 47 | GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0032088; P:negative regulation of NF-kappaB transcription factor activity; ISS:UniProtKB.::GO:0090086; P:negative regulation of protein deubiquitination; ISS:UniProtKB.::GO:0045787; P:positive regulation of cell cycle; ISS:UniProtKB.::GO:0051865; P:protein autoubiquitination; ISS:UniProtKB.::GO:0031648; P:protein destabilization; ISS:UniProtKB.::GO:0006513; P:protein monoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB. | 19 | Q14527 | 1009 | HLTF_HUMAN Helicase-like transcription factor... | 79 | 0.46 | 37.4 | 24 | 47 | GO:0005634; C:nucleus; IDA:HPA. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; TAS:ProtInc.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 20 | Q3UWZ0 | 467 | TRI75_MOUSE Tripartite motif-containing prote... | 59 | 0.47 | 37 | 29 | 47 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 21 | Q8NHY2 | 731 | RFWD2_HUMAN E3 ubiquitin-protein ligase RFWD2... | 78 | 0.49 | 37 | 31 | 50 | GO:0005813; C:centrosome; IDA:HPA.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005925; C:focal adhesion; IDA:HPA.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006977; P:DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest; TAS:Reactome. | 22 | Q9DED4 | 166 | CIRBB_XENLA Cold-inducible RNA-binding protei... | 69 | 0.49 | 35.8 | 32 | 57 | GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0019899; F:enzyme binding; IPI:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0016477; P:cell migration; IMP:UniProtKB.::GO:0007369; P:gastrulation; IMP:UniProtKB.::GO:0048255; P:mRNA stabilization; IMP:UniProtKB.::GO:0060212; P:negative regulation of nuclear-transcribed mRNA poly(A) tail shortening; IMP:UniProtKB.::GO:0022008; P:neurogenesis; IMP:UniProtKB.::GO:0045727; P:positive regulation of translation; ISS:UniProtKB.::GO:0048793; P:pronephros development; ISS:UniProtKB.::GO:0009409; P:response to cold; ISS:UniProtKB. | 23 | O93235 | 166 | CIRBA_XENLA Cold-inducible RNA-binding protei... | 69 | 0.53 | 35.8 | 32 | 57 | GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0019899; F:enzyme binding; ISS:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0070181; F:SSU rRNA binding; ISS:UniProtKB.::GO:0030371; F:translation repressor activity; ISS:UniProtKB. | | | | | | | | | | GO:0016477; P:cell migration; IMP:UniProtKB.::GO:0007369; P:gastrulation; IMP:UniProtKB.::GO:0072004; P:kidney field specification; IMP:UniProtKB.::GO:0048255; P:mRNA stabilization; ISS:UniProtKB.::GO:0060212; P:negative regulation of nuclear-transcribed mRNA poly(A) tail shortening; ISS:UniProtKB.::GO:0022008; P:neurogenesis; IMP:UniProtKB.::GO:0045727; P:positive regulation of translation; ISS:UniProtKB.::GO:0048793; P:pronephros development; IMP:UniProtKB.::GO:0009409; P:response to cold; IEP:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0034063; P:stress granule assembly; ISS:UniProtKB. | 24 | Q9R1A8 | 733 | RFWD2_MOUSE E3 ubiquitin-protein ligase RFWD2... | 78 | 0.56 | 37 | 31 | 50 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:BHF-UCL.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 25 | P38748 | 585 | ETP1_YEAST RING finger protein ETP1 OS=Saccha... | 47 | 0.58 | 37 | 38 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008139; F:nuclear localization sequence binding; IDA:SGD.::GO:0043130; F:ubiquitin binding; IDA:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0045471; P:response to ethanol; IMP:SGD. | 26 | Q1ACD5 | 494 | TRIM5_SAGOE Tripartite motif-containing prote... | 66 | 0.59 | 36.6 | 35 | 45 | GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 27 | Q9SZL9 | 1111 | CSLD4_ARATH Cellulose synthase-like protein D... | 37 | 0.63 | 37 | 32 | 59 | GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW. | | | | | | | | | | GO:0016760; F:cellulose synthase (UDP-forming) activity; IEA:InterPro. | | | | | | | | | | GO:0007047; P:cellular cell wall organization; IEA:UniProtKB-KW.::GO:0030244; P:cellulose biosynthetic process; IEA:InterPro.::GO:0009846; P:pollen germination; IMP:TAIR. | 28 | Q1ACD7 | 494 | TRIM5_NOMLE Tripartite motif-containing prote... | 87 | 0.74 | 36.2 | 32 | 43 | GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 29 | Q1ACD6 | 494 | TRIM5_HYLSY Tripartite motif-containing prote... | 87 | 0.76 | 36.2 | 32 | 43 | GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 30 | Q5C8T6 | 493 | TRIM5_GORGO Tripartite motif-containing prote... | 66 | 0.8 | 36.2 | 32 | 44 | GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 31 | Q5D7I1 | 547 | TRIM5_ATEGE Tripartite motif-containing prote... | 92 | 0.8 | 36.2 | 30 | 40 | GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | |