rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
91 | Q99M28 | 305 | RNPS1_MOUSE RNA-binding protein with serine-r... | 66 | 3.4 | 33.9 | 33 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 92 | Q4R5N1 | 305 | RNPS1_MACFA RNA-binding protein with serine-r... | 66 | 3.4 | 33.9 | 33 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 93 | Q15287 | 305 | RNPS1_HUMAN RNA-binding protein with serine-r... | 66 | 3.4 | 33.9 | 33 | 47 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IDA:UniProtKB.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 94 | A6QR16 | 305 | RNPS1_BOVIN RNA-binding protein with serine-r... | 66 | 3.4 | 33.9 | 33 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 95 | Q642J5 | 373 | RFOX1_DANRE RNA binding protein fox-1 homolog... | 81 | 3.5 | 33.9 | 31 | 51 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0021854; P:hypothalamus development; IMP:ZFIN.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 96 | Q99PN3 | 545 | TRI26_MOUSE Tripartite motif-containing prote... | 64 | 3.5 | 34.3 | 28 | 52 | GO:0005737; C:cytoplasm; IDA:MGI. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 97 | Q5RB63 | 754 | HTSF1_PONAB HIV Tat-specific factor 1 homolog... | 105 | 3.6 | 34.3 | 26 | 46 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 98 | O43719 | 755 | HTSF1_HUMAN HIV Tat-specific factor 1 OS=Homo... | 105 | 3.7 | 34.3 | 26 | 46 | GO:0005634; C:nucleus; IDA:HPA. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; TAS:ProtInc.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0019079; P:viral genome replication; TAS:ProtInc. | 99 | Q84K34 | 349 | SIL10_ARATH E3 ubiquitin-protein ligase SINA-... | 45 | 4.1 | 33.9 | 36 | 47 | GO:0005634; C:nucleus; IEA:InterPro. | | | | | | | | | | GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:InterPro.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. | 100 | Q2QNS6 | 1215 | CSLD4_ORYSJ Cellulose synthase-like protein D... | 33 | 4.4 | 34.3 | 36 | 48 | GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW. | | | | | | | | | | GO:0016760; F:cellulose synthase (UDP-forming) activity; IEA:InterPro. | | | | | | | | | | GO:0007047; P:cellular cell wall organization; IEA:UniProtKB-KW.::GO:0030244; P:cellulose biosynthetic process; IEA:InterPro.::GO:0071669; P:plant-type cell wall organization or biogenesis; IDA:UniProtKB. | 101 | Q6NUC6 | 1114 | RC3H1_XENLA Roquin OS=Xenopus laevis (African... | 43 | 4.5 | 33.9 | 33 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 102 | Q8BIF2 | 374 | RFOX3_MOUSE RNA binding protein fox-1 homolog... | 81 | 4.5 | 33.9 | 30 | 52 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0043025; C:neuronal cell body; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI. | | | | | | | | | | GO:0003677; F:DNA binding; IDA:MGI.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 103 | Q54KR9 | 234 | NCBP2_DICDI Nuclear cap-binding protein subun... | 85 | 4.8 | 33.1 | 31 | 51 | GO:0005846; C:nuclear cap binding complex; ISS:dictyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0000339; F:RNA cap binding; ISS:dictyBase. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:dictyBase. | 104 | P40072 | 274 | SLX8_YEAST E3 ubiquitin-protein ligase comple... | 66 | 4.9 | 33.5 | 33 | 47 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IDA:SGD. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0016925; P:protein sumoylation; IMP:SGD.::GO:0000723; P:telomere maintenance; IMP:SGD. | 105 | Q4VGL6 | 1130 | RC3H1_MOUSE Roquin OS=Mus musculus (Mouse). G... | 43 | 5.1 | 33.9 | 33 | 49 | GO:0000932; C:cytoplasmic mRNA processing body; IDA:BHF-UCL.::GO:0010494; C:cytoplasmic stress granule; IDA:BHF-UCL. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; IDA:BHF-UCL.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0033962; P:cytoplasmic mRNA processing body assembly; IMP:BHF-UCL.::GO:0046007; P:negative regulation of activated T cell proliferation; IMP:BHF-UCL.::GO:0030889; P:negative regulation of B cell proliferation; IMP:BHF-UCL.::GO:0002635; P:negative regulation of germinal center formation; IMP:BHF-UCL.::GO:0045623; P:negative regulation of T-helper cell differentiation; IMP:MGI.::GO:0000956; P:nuclear-transcribed mRNA catabolic process; IMP:BHF-UCL.::GO:0043488; P:regulation of mRNA stability; IMP:BHF-UCL.::GO:0050856; P:regulation of T cell receptor signaling pathway; IMP:BHF-UCL. | 106 | Q5TC82 | 1133 | RC3H1_HUMAN Roquin OS=Homo sapiens (Human). G... | 43 | 5.2 | 33.9 | 33 | 49 | GO:0000932; C:cytoplasmic mRNA processing body; ISS:BHF-UCL.::GO:0010494; C:cytoplasmic stress granule; ISS:BHF-UCL. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; ISS:BHF-UCL.::GO:0004842; F:ubiquitin-protein ligase activity; TAS:BHF-UCL.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0033962; P:cytoplasmic mRNA processing body assembly; ISS:BHF-UCL.::GO:0046007; P:negative regulation of activated T cell proliferation; ISS:BHF-UCL.::GO:0030889; P:negative regulation of B cell proliferation; ISS:BHF-UCL.::GO:0002635; P:negative regulation of germinal center formation; ISS:BHF-UCL.::GO:0045623; P:negative regulation of T-helper cell differentiation; ISS:BHF-UCL.::GO:0000956; P:nuclear-transcribed mRNA catabolic process; ISS:BHF-UCL.::GO:0043488; P:regulation of mRNA stability; ISS:BHF-UCL.::GO:0050856; P:regulation of T cell receptor signaling pathway; ISS:BHF-UCL. | 107 | P17078 | 123 | RL35_RAT 60S ribosomal protein L35 OS=Rattus ... | 50 | 5.4 | 32 | 28 | 60 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 108 | Q6ZWV7 | 123 | RL35_MOUSE 60S ribosomal protein L35 OS=Mus m... | 50 | 5.4 | 32 | 28 | 60 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 109 | Q86UV7 | 250 | TRI73_HUMAN Tripartite motif-containing prote... | 63 | 5.7 | 33.1 | 25 | 44 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 110 | Q96A37 | 237 | RN166_HUMAN RING finger protein 166 OS=Homo s... | 128 | 5.9 | 33.1 | 24 | 38 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 111 | Q98T89 | 224 | TWSG1_CHICK Twisted gastrulation protein homo... | 99 | 6.8 | 32.7 | 25 | 45 | | | | | | | | | | | | | | | | | | | | | | 112 | Q6R7I6 | 193 | Y038_OSHVF Putative RING finger protein ORF38... | 55 | 6.9 | 32.3 | 29 | 51 | | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 113 | Q6PCN7 | 1003 | HLTF_MOUSE Helicase-like transcription factor... | 81 | 7.2 | 33.5 | 23 | 46 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IDA:MGI.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 114 | Q6FKG4 | 579 | PABP_CANGA Polyadenylate-binding protein, cyt... | 132 | 7.4 | 33.1 | 25 | 44 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. | 115 | Q86UV6 | 250 | TRI74_HUMAN Tripartite motif-containing prote... | 63 | 7.5 | 32.7 | 25 | 44 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 116 | Q95216 | 1005 | HLTF_RABIT Helicase-like transcription factor... | 80 | 8.3 | 33.1 | 26 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 117 | P0C8Z4 | 992 | RMXL3_PANTR RNA-binding motif protein, X-link... | 92 | 9.5 | 33.1 | 32 | 49 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 118 | Q38HM4 | 350 | TRI63_MOUSE E3 ubiquitin-protein ligase TRIM6... | 78 | 9.9 | 32.7 | 29 | 46 | GO:0031430; C:M band; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030018; C:Z disc; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 119 | Q99PP6 | 485 | TR34A_MOUSE Tripartite motif-containing prote... | 62 | 9.9 | 32.7 | 29 | 45 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | |