Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YER068W
Length:
587
Number of sequences:
5887
Description:
YER068W MOT2 SGDID:S000000870, Chr V from 293050-294813, Genome Release 64-1-1, Verified ORF, "Subunit of the CCR4-NOT complex, which has roles in transcription regulation, mRNA degradation, and post-transcriptional modifications; with Ubc4p, ubiquitinates nascent polypeptide-associated complex subunits and histone demethyase Jhd2p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61Q28E41    309   RNPS1_XENTR RNA-binding protein with serine-r...821.7     35     29     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
62Q5D7J0    495   TRIM5_COLGU Tripartite motif-containing prote...881.8     35     31     39GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
63A5D8S5    867   SH3R1_DANRE E3 ubiquitin-protein ligase SH3RF...471.8     35.4     40     51GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0030027; C:lamellipodium; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
64Q5D7I2    494   TRIM5_PITPI Tripartite motif-containing prote...872     35     31     40GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
65Q495X7    471   TRI60_HUMAN Tripartite motif-containing prote...732     35     33     48GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
66O77666    545   TRI26_PIG Tripartite motif-containing protein...662     35     30     53GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
67P28644    233   ROC1_SPIOL 28 kDa ribonucleoprotein, chloropl...732.1     34.3     27     52GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
68A6NFN3    312   RFOX3_HUMAN RNA binding protein fox-1 homolog...1012.1     34.7     28     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
69Q6MFY8    247   TRI40_RAT Tripartite motif-containing protein...572.2     34.3     28     47GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
70Q5D7I9    495   TRIM5_PYGNE Tripartite motif-containing prote...882.2     34.7     31     39GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
71Q12899    539   TRI26_HUMAN Tripartite motif-containing prote...1072.2     35     23     50
GO:0003677; F:DNA binding; NAS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
72Q5BN31    494   TRIM5_SAIBB Tripartite motif-containing prote...662.4     34.7     32     44GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
73Q7YR34    539   TRI26_PANTR Tripartite motif-containing prote...1072.4     34.7     23     50
GO:0008270; F:zinc ion binding; IEA:InterPro.
74Q865W2    486   TRI50_PIG E3 ubiquitin-protein ligase TRIM50 ...502.5     34.7     30     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
75P14373    513   TRI27_HUMAN Zinc finger protein RFP OS=Homo s...632.5     34.7     30     43GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005887; C:integral to plasma membrane; TAS:ProtInc.::GO:0005624; C:membrane fraction; TAS:ProtInc.::GO:0031965; C:nuclear membrane; IDA:MGI.::GO:0016605; C:PML body; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004714; F:transmembrane receptor protein tyrosine kinase activity; TAS:ProtInc.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0008283; P:cell proliferation; TAS:ProtInc.::GO:0072643; P:interferon-gamma secretion; IMP:UniProtKB.::GO:0002820; P:negative regulation of adaptive immune response; IMP:UniProtKB.::GO:0090281; P:negative regulation of calcium ion import; IMP:UniProtKB.::GO:0045814; P:negative regulation of gene expression, epigenetic; IDA:MGI.::GO:1900041; P:negative regulation of interleukin-2 secretion; IMP:UniProtKB.::GO:0006469; P:negative regulation of protein kinase activity; IDA:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0032720; P:negative regulation of tumor necrosis factor production; IMP:UniProtKB.::GO:0070206; P:protein trimerization; IDA:UniProtKB.::GO:0007283; P:spermatogenesis; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
76Q8BGC0    757   HTSF1_MOUSE HIV Tat-specific factor 1 homolog...1052.6     34.7     26     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
77P62603    542   TRI26_RAT Tripartite motif-containing protein...1072.6     34.7     26     50GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
78Q5D7I0    494   TRIM5_SAISC Tripartite motif-containing prote...662.7     34.7     32     44GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
79Q62158    513   TRI27_MOUSE Zinc finger protein RFP OS=Mus mu...632.7     34.7     30     43GO:0005737; C:cytoplasm; IDA:MGI.::GO:0016605; C:PML body; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0072643; P:interferon-gamma secretion; ISS:UniProtKB.::GO:0002820; P:negative regulation of adaptive immune response; ISS:UniProtKB.::GO:0090281; P:negative regulation of calcium ion import; ISS:UniProtKB.::GO:1900041; P:negative regulation of interleukin-2 secretion; ISS:UniProtKB.::GO:0006469; P:negative regulation of protein kinase activity; ISS:UniProtKB.::GO:0032720; P:negative regulation of tumor necrosis factor production; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
80Q6R7A0    215   Y121_OSHVF Putative zinc finger protein ORF12...722.7     33.9     31     42
GO:0008270; F:zinc ion binding; IEA:InterPro.
81Q5C8T8    493   TRIM5_PONAB Tripartite motif-containing prote...663     34.3     30     44GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
82O60177    1040   YG42_SCHPO Uncharacterized ATP-dependent heli...1743.1     34.7     22     40GO:0016585; C:chromatin remodeling complex; ISS:PomBase.::GO:0000790; C:nuclear chromatin; ISS:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006338; P:chromatin remodeling; ISS:PomBase.::GO:0006281; P:DNA repair; ISS:PomBase.
83Q8CH25    1031   SLTM_MOUSE SAFB-like transcription modulator ...653.1     34.7     31     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
84Q03605    160   YNN1_CAEEL Uncharacterized RING finger protei...553.2     33.1     35     51
GO:0008270; F:zinc ion binding; IEA:InterPro.
85Q9NWH9    1034   SLTM_HUMAN SAFB-like transcription modulator ...653.2     34.7     32     52GO:0005634; C:nucleus; IDA:HPA.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
86Q2YEM9    493   TRIM5_PONPY Tripartite motif-containing prote...663.2     34.3     30     44GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
87Q6J1I7    237   RN166_RAT RING finger protein 166 OS=Rattus n...1283.2     33.9     24     38GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
88Q3U9F6    237   RN166_MOUSE RING finger protein 166 OS=Mus mu...1283.2     33.9     24     38GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
89Q6AYK1    305   RNPS1_RAT RNA-binding protein with serine-ric...663.4     33.9     33     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
90Q5NVM8    305   RNPS1_PONAB RNA-binding protein with serine-r...663.4     33.9     33     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
91Q99M28    305   RNPS1_MOUSE RNA-binding protein with serine-r...663.4     33.9     33     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
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