Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YER017C
Length:
761
Number of sequences:
5887
Description:
YER017C AFG3 SGDID:S000000819, Chr V from 191788-189503, Genome Release 64-1-1, reverse complement, Verified ORF, "Component, with Yta12p, of the mitochondrial inner membrane m-AAA protease that mediates degradation of misfolded or unassembled proteins and is also required for correct assembly of mitochondrial enzyme complexes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
331P53549    437   PRS10_YEAST 26S protease subunit RPT4 OS=Sacc...2541e-45     173     38     56GO:0005737; C:cytoplasm; IEA:InterPro.::GO:0005634; C:nucleus; IDA:SGD.::GO:0008540; C:proteasome regulatory particle, base subcomplex; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; ISS:SGD.::GO:0019904; F:protein domain specific binding; IDA:SGD.
GO:0030433; P:ER-associated protein catabolic process; IMP:SGD.::GO:0006289; P:nucleotide-excision repair; IGI:SGD.::GO:0045899; P:positive regulation of RNA polymerase II transcriptional preinitiation complex assembly; IMP:SGD.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IMP:SGD.::GO:0070682; P:proteasome regulatory particle assembly; IMP:SGD.
332Q8SQI9    387   PRS6B_ENCCU 26S protease regulatory subunit 6...2543e-45     171     38     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0030163; P:protein catabolic process; IEA:InterPro.
333Q3UMC0    893   SPAT5_MOUSE Spermatogenesis-associated protei...2469e-35     145     37     52GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
334P41836    403   PRS8_SCHPO 26S protease regulatory subunit 8 ...2534e-45     171     38     59GO:0005829; C:cytosol; IDA:PomBase.::GO:0005635; C:nuclear envelope; IDA:PomBase.::GO:0008540; C:proteasome regulatory particle, base subcomplex; ISS:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; ISS:PomBase.::GO:0004175; F:endopeptidase activity; ISS:PomBase.
GO:0007346; P:regulation of mitotic cell cycle; IC:PomBase.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:PomBase.
335Q5AWS6    823   CDC48_EMENI Cell division control protein 48 ...2387e-40     161     39     57
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
336Q8NB90    893   SPAT5_HUMAN Spermatogenesis-associated protei...2482e-36     150     38     52GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
337P46502    414   PRS6B_CAEEL Probable 26S protease regulatory ...2542e-44     169     41     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0030163; P:protein catabolic process; IEA:InterPro.::GO:0000003; P:reproduction; IMP:WormBase.
338P32794    780   AFG2_YEAST ATPase family gene 2 protein OS=Sa...2518e-37     152     35     53GO:0030687; C:preribosome, large subunit precursor; IMP:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IDA:SGD.
GO:0042493; P:response to drug; IMP:SGD.::GO:0042273; P:ribosomal large subunit biogenesis; IMP:SGD.
339P54609    809   CD48A_ARATH Cell division control protein 48 ...2375e-39     159     39     56GO:0005618; C:cell wall; IDA:TAIR.::GO:0022626; C:cytosolic ribosome; IDA:TAIR.::GO:0005794; C:Golgi apparatus; IDA:TAIR.::GO:0005635; C:nuclear envelope; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.::GO:0009524; C:phragmoplast; IDA:TAIR.::GO:0005886; C:plasma membrane; IDA:TAIR.::GO:0009506; C:plasmodesma; IDA:TAIR.::GO:0005819; C:spindle; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IMP:TAIR.::GO:0009846; P:pollen germination; IMP:TAIR.::GO:0009860; P:pollen tube growth; IMP:TAIR.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0046686; P:response to cadmium ion; IEP:TAIR.
340P33298    428   PRS6B_YEAST 26S protease regulatory subunit 6...2501e-43     167     42     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0008540; C:proteasome regulatory particle, base subcomplex; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0045899; P:positive regulation of RNA polymerase II transcriptional preinitiation complex assembly; IMP:SGD.::GO:0070682; P:proteasome regulatory particle assembly; IMP:SGD.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IMP:SGD.
341P46507    415   PRS6B_MANSE 26S protease regulatory subunit 6...2481e-43     166     39     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0030163; P:protein catabolic process; IEA:InterPro.
342P78578    423   PRS6B_ASPNG 26S protease regulatory subunit 6...2383e-43     166     43     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0030163; P:protein catabolic process; IEA:InterPro.
343Q7ZU99    806   TERA_DANRE Transitional endoplasmic reticulum...2362e-40     163     40     57GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008289; F:lipid binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
344Q6GL04    805   TERA_XENTR Transitional endoplasmic reticulum...2366e-42     167     41     58GO:0000785; C:chromatin; ISS:UniProtKB.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; ISS:UniProtKB.::GO:0008289; F:lipid binding; IEA:UniProtKB-KW.::GO:0032403; F:protein complex binding; ISS:UniProtKB.
GO:0034214; P:protein hexamerization; ISS:UniProtKB.::GO:0006810; P:transport; IEA:UniProtKB-KW.
345O42587    405   PR6AA_XENLA 26S protease regulatory subunit 6...2104e-43     165     41     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0030163; P:protein catabolic process; IEA:InterPro.
346O74894    389   PRS6B_SCHPO 26S protease regulatory subunit 6...2564e-43     164     40     55GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0008540; C:proteasome regulatory particle, base subcomplex; ISS:PomBase.
GO:0005524; F:ATP binding; IC:PomBase.::GO:0016887; F:ATPase activity; ISS:PomBase.
GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:PomBase.
347P23787    805   TERA_XENLA Transitional endoplasmic reticulum...2366e-42     167     41     58GO:0000785; C:chromatin; IDA:UniProtKB.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IDA:UniProtKB.::GO:0008289; F:lipid binding; IEA:UniProtKB-KW.::GO:0032403; F:protein complex binding; IPI:UniProtKB.
GO:0034214; P:protein hexamerization; IDA:UniProtKB.::GO:0006810; P:transport; IEA:UniProtKB-KW.
348Q9MUP8    890   YCF2_MESVI Protein ycf2 OS=Mesostigma viride....4592e-42     169     29     47GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004222; F:metalloendopeptidase activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:InterPro.
349Q3ZBT1    806   TERA_BOVIN Transitional endoplasmic reticulum...2368e-42     167     41     57GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008289; F:lipid binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006810; P:transport; IEA:UniProtKB-KW.
350P46462    806   TERA_RAT Transitional endoplasmic reticulum A...2368e-42     167     41     57GO:0005829; C:cytosol; IDA:RGD.::GO:0005783; C:endoplasmic reticulum; IDA:RGD.::GO:0005792; C:microsome; IDA:RGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IDA:BHF-UCL.::GO:0016887; F:ATPase activity; IDA:RGD.::GO:0042802; F:identical protein binding; IDA:BHF-UCL.::GO:0008289; F:lipid binding; IEA:UniProtKB-KW.::GO:0005102; F:receptor binding; IDA:RGD.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:RGD.::GO:0032436; P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process; IMP:RGD.::GO:0051260; P:protein homooligomerization; IDA:RGD.
351Q01853    806   TERA_MOUSE Transitional endoplasmic reticulum...2368e-42     167     41     57GO:0005829; C:cytosol; ISS:UniProtKB.::GO:0005783; C:endoplasmic reticulum; ISS:UniProtKB.::GO:0005792; C:microsome; IDA:MGI.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008289; F:lipid binding; IEA:UniProtKB-KW.::GO:0031593; F:polyubiquitin binding; IDA:BHF-UCL.
GO:0006919; P:activation of cysteine-type endopeptidase activity involved in apoptotic process; IDA:MGI.::GO:0070842; P:aggresome assembly; IGI:MGI.::GO:0030970; P:retrograde protein transport, ER to cytosol; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IGI:MGI.
352P55072    806   TERA_HUMAN Transitional endoplasmic reticulum...2368e-42     167     41     57GO:0005829; C:cytosol; IDA:UniProtKB.::GO:0005783; C:endoplasmic reticulum; IDA:UniProtKB.::GO:0005792; C:microsome; ISS:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0000502; C:proteasome complex; IDA:BHF-UCL.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; TAS:UniProtKB.::GO:0008289; F:lipid binding; IEA:UniProtKB-KW.::GO:0031593; F:polyubiquitin binding; IDA:BHF-UCL.::GO:0019904; F:protein domain specific binding; IPI:UniProtKB.::GO:0019903; F:protein phosphatase binding; IPI:BHF-UCL.
GO:0006919; P:activation of cysteine-type endopeptidase activity involved in apoptotic process; ISS:UniProtKB.::GO:0006302; P:double-strand break repair; IDA:UniProtKB.::GO:0030968; P:endoplasmic reticulum unfolded protein response; TAS:UniProtKB.::GO:0030433; P:ER-associated protein catabolic process; TAS:UniProtKB.::GO:0032436; P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process; IDA:BHF-UCL.::GO:0031334; P:positive regulation of protein complex assembly; IDA:BHF-UCL.::GO:0016567; P:protein ubiquitination; NAS:UniProtKB.::GO:0042981; P:regulation of apoptotic process; TAS:UniProtKB.::GO:0030970; P:retrograde protein transport, ER to cytosol; IDA:UniProtKB.
353O15381    856   NVL_HUMAN Nuclear valosin-containing protein-...2852e-40     163     32     54GO:0016235; C:aggresome; IDA:HPA.::GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
GO:0005524; F:ATP binding; TAS:ProtInc.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
354P03974    806   TERA_PIG Transitional endoplasmic reticulum A...2351e-41     167     38     60GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008289; F:lipid binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006810; P:transport; IEA:UniProtKB-KW.
355Q9DBY8    855   NVL_MOUSE Nuclear valosin-containing protein-...2893e-40     162     34     54GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
356Q9P3A7    815   CDC48_SCHPO Cell division cycle protein 48 OS...2381e-37     154     39     55GO:0034098; C:Cdc48p-Npl4p-Ufd1p AAA ATPase complex; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:PomBase.
GO:0033554; P:cellular response to stress; IGI:PomBase.::GO:0030433; P:ER-associated protein catabolic process; ISS:PomBase.::GO:0061166; P:establishment of endoplasmic reticulum localization involved in endoplasmic reticulum polarization at cell division site; IMP:PomBase.::GO:0033047; P:regulation of mitotic sister chromatid segregation; IGI:PomBase.::GO:0030970; P:retrograde protein transport, ER to cytosol; ISS:PomBase.::GO:0051230; P:spindle disassembly; TAS:PomBase.::GO:0006906; P:vesicle fusion; ISS:PomBase.
357O60058    809   AFG2_SCHPO ATPase family gene 2 protein OS=Sc...2389e-34     142     37     55GO:0005829; C:cytosol; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0042273; P:ribosomal large subunit biogenesis; ISS:PomBase.
358P54811    809   TERA1_CAEEL Transitional endoplasmic reticulu...2375e-38     155     40     55GO:0034098; C:Cdc48p-Npl4p-Ufd1p AAA ATPase complex; IPI:WormBase.::GO:0005634; C:nucleus; IDA:WormBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IDA:WormBase.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0040002; P:collagen and cuticulin-based cuticle development; IMP:WormBase.::GO:0000910; P:cytokinesis; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0030968; P:endoplasmic reticulum unfolded protein response; IMP:WormBase.::GO:0071712; P:ER-associated misfolded protein catabolic process; IGI:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0007126; P:meiosis; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040018; P:positive regulation of multicellular organism growth; IMP:WormBase.
359P33760    1030   PEX6_YEAST Peroxisomal ATPase PEX6 OS=Sacchar...2358e-40     162     40     60GO:0005829; C:cytosol; IDA:SGD.::GO:0005624; C:membrane fraction; IDA:SGD.::GO:0005778; C:peroxisomal membrane; IEA:UniProtKB-SubCell.::GO:0005625; C:soluble fraction; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IMP:SGD.::GO:0046982; F:protein heterodimerization activity; IMP:SGD.
GO:0016562; P:protein import into peroxisome matrix, receptor recycling; IDA:SGD.::GO:0001302; P:replicative cell aging; IGI:SGD.
360Q13608    980   PEX6_HUMAN Peroxisome assembly factor 2 OS=Ho...1140.000004     54.3     28     49GO:0005829; C:cytosol; IDA:UniProtKB.::GO:0005778; C:peroxisomal membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IMP:UniProtKB.::GO:0042623; F:ATPase activity, coupled; IMP:UniProtKB.::GO:0008022; F:protein C-terminus binding; IPI:UniProtKB.::GO:0032403; F:protein complex binding; IDA:UniProtKB.
GO:0016561; P:protein import into peroxisome matrix, translocation; IMP:UniProtKB.::GO:0050821; P:protein stabilization; IMP:UniProtKB.
361Q07844    837   RIX7_YEAST Ribosome biogenesis ATPase RIX7 OS...2379e-33     139     34     54GO:0005730; C:nucleolus; IDA:SGD.::GO:0030687; C:preribosome, large subunit precursor; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0042273; P:ribosomal large subunit biogenesis; IMP:SGD.::GO:0000055; P:ribosomal large subunit export from nucleus; IMP:SGD.
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