Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YEL037C
Length:
398
Number of sequences:
5887
Description:
YEL037C RAD23 SGDID:S000000763, Chr V from 82603-81407, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein with ubiquitin-like N terminus, subunit of Nuclear Excision Repair Factor 2 (NEF2) with Rad4p that binds damaged DNA; enhances protein deglycosylation activity of Png1p; also involved, with Rad4p, in ubiquitylated protein turnover"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31P63053    128   RL40_PIG Ubiquitin-60S ribosomal protein L40 ...530.017     38.9     34     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
32P68205    128   RL40_OPHHA Ubiquitin-60S ribosomal protein L4...530.017     38.9     34     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
33P62984    128   RL40_MOUSE Ubiquitin-60S ribosomal protein L4...530.017     38.9     34     58GO:0005829; C:cytosol; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
34P0C273    128   RL40_MACFA Ubiquitin-60S ribosomal protein L4...530.017     38.9     34     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
35P62987    128   RL40_HUMAN Ubiquitin-60S ribosomal protein L4...530.017     38.9     34     58GO:0005829; C:cytosol; TAS:Reactome.::GO:0022625; C:cytosolic large ribosomal subunit; IDA:UniProtKB.::GO:0030666; C:endocytic vesicle membrane; TAS:Reactome.::GO:0010008; C:endosome membrane; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005886; C:plasma membrane; TAS:Reactome.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:BHF-UCL.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0000187; P:activation of MAPK activity; TAS:Reactome.::GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; TAS:Reactome.::GO:0006916; P:anti-apoptosis; TAS:Reactome.::GO:0002479; P:antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent; TAS:Reactome.::GO:0006915; P:apoptotic process; TAS:Reactome.::GO:0016044; P:cellular membrane organization; TAS:Reactome.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0006977; P:DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest; TAS:Reactome.::GO:0006281; P:DNA repair; TAS:Reactome.::GO:0046788; P:egress of virus within host cell; TAS:Reactome.::GO:0016197; P:endosome transport; TAS:Reactome.::GO:0007173; P:epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0008543; P:fibroblast growth factor receptor signaling pathway; TAS:Reactome.::GO:0000080; P:G1 phase of mitotic cell cycle; TAS:Reactome.::GO:0000082; P:G1/S transition of mitotic cell cycle; TAS:Reactome.::GO:0007249; P:I-kappaB kinase/NF-kappaB cascade; TAS:Reactome.::GO:0008624; P:induction of apoptosis by extracellular signals; TAS:Reactome.::GO:0045087; P:innate immune response; TAS:Reactome.::GO:0007254; P:JNK cascade; TAS:Reactome.::GO:0000216; P:M/G1 transition of mitotic cell cycle; TAS:Reactome.::GO:0002755; P:MyD88-dependent toll-like receptor signaling pathway; TAS:Reactome.::GO:0042059; P:negative regulation of epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0032480; P:negative regulation of type I interferon production; TAS:Reactome.::GO:0051436; P:negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0048011; P:nerve growth factor receptor signaling pathway; TAS:Reactome.::GO:0007220; P:Notch receptor processing; TAS:Reactome.::GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; TAS:Reactome.::GO:0070423; P:nucleotide-binding oligomerization domain containing signaling pathway; TAS:Reactome.::GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; TAS:Reactome.::GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; TAS:Reactome.::GO:0051437; P:positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0000209; P:protein polyubiquitination; TAS:Reactome.::GO:0000084; P:S phase of mitotic cell cycle; TAS:Reactome.::GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; TAS:Reactome.::GO:0050852; P:T cell receptor signaling pathway; TAS:Reactome.::GO:0008063; P:Toll signaling pathway; TAS:Reactome.::GO:0034130; P:toll-like receptor 1 signaling pathway; TAS:Reactome.::GO:0034134; P:toll-like receptor 2 signaling pathway; TAS:Reactome.::GO:0034138; P:toll-like receptor 3 signaling pathway; TAS:Reactome.::GO:0034142; P:toll-like receptor 4 signaling pathway; TAS:Reactome.::GO:0006412; P:translation; NAS:UniProtKB.::GO:0006414; P:translational elongation; TAS:Reactome.::GO:0006413; P:translational initiation; TAS:Reactome.::GO:0006415; P:translational termination; TAS:Reactome.::GO:0035666; P:TRIF-dependent toll-like receptor signaling pathway; TAS:Reactome.::GO:0019083; P:viral transcription; TAS:Reactome.
36P63052    128   RL40_FELCA Ubiquitin-60S ribosomal protein L4...530.017     38.9     34     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
37P63050    128   RL40_CANFA Ubiquitin-60S ribosomal protein L4...530.017     38.9     34     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
38P63048    128   RL40_BOVIN Ubiquitin-60S ribosomal protein L4...530.017     38.9     34     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
39Q49WF1    597   HTRAL_STAS1 Serine protease htrA-like OS=DSM ...730.037     40     32     53GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
40Q8R317    582   UBQL1_MOUSE Ubiquilin-1 OS=Mus musculus (Mous...840.042     39.7     25     52GO:0005783; C:endoplasmic reticulum; ISS:HGNC.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; ISS:HGNC.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
GO:0019215; F:intermediate filament binding; NAS:UniProtKB.::GO:0019900; F:kinase binding; ISS:UniProtKB.::GO:0005102; F:receptor binding; NAS:UniProtKB.
GO:0006915; P:apoptotic process; ISS:HGNC.::GO:0031396; P:regulation of protein ubiquitination; ISS:HGNC.::GO:0001666; P:response to hypoxia; ISS:HGNC.
41Q5R684    589   UBQL1_PONAB Ubiquilin-1 OS=Pongo abelii (Suma...620.046     39.7     27     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
42Q9UMX0    589   UBQL1_HUMAN Ubiquilin-1 OS=Homo sapiens (Huma...620.046     39.7     27     60GO:0005783; C:endoplasmic reticulum; IDA:HGNC.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; NAS:UniProtKB.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
GO:0019900; F:kinase binding; IPI:UniProtKB.
GO:0006915; P:apoptotic process; IMP:HGNC.::GO:0031396; P:regulation of protein ubiquitination; IDA:HGNC.::GO:0001666; P:response to hypoxia; IMP:HGNC.
43Q9QZM0    638   UBQL2_MOUSE Ubiquilin-2 OS=Mus musculus (Mous...830.051     39.3     24     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
44P69201    128   RL40_LEIMA Ubiquitin-60S ribosomal protein L4...530.061     37     32     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
45Q8IYU4    475   UBQLN_HUMAN Ubiquilin-like protein OS=Homo sa...580.092     38.5     24     57
46Q5XIP4    612   UBQLN_RAT Ubiquilin-like protein OS=Rattus no...580.099     38.5     24     59
47Q05120    93   UBIL_NPVOP Ubiquitin-like protein OS=Orgyia p...530.11     35.8     30     60
48A3KPW9    1160   BAG6_DANRE Large proline-rich protein BAG6 OS...720.12     38.5     29     54GO:0071818; C:BAT3 complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0031593; F:polyubiquitin binding; ISS:UniProtKB.::GO:0070628; F:proteasome binding; ISS:UniProtKB.::GO:0043022; F:ribosome binding; ISS:UniProtKB.
GO:0070059; P:apoptosis in response to endoplasmic reticulum stress; ISS:UniProtKB.::GO:0007420; P:brain development; ISS:UniProtKB.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0042771; P:DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; ISS:UniProtKB.::GO:0009790; P:embryo development; ISS:UniProtKB.::GO:0018393; P:internal peptidyl-lysine acetylation; ISS:UniProtKB.::GO:0001822; P:kidney development; ISS:UniProtKB.::GO:0030324; P:lung development; ISS:UniProtKB.::GO:0032435; P:negative regulation of proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0050821; P:protein stabilization; ISS:UniProtKB.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.::GO:0007130; P:synaptonemal complex assembly; ISS:UniProtKB.::GO:0071816; P:tail-anchored membrane protein insertion into ER membrane; ISS:UniProtKB.::GO:0006810; P:transport; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
49P0DJ25    129   RL40_TETTS Ubiquitin-60S ribosomal protein L4...530.13     36.2     34     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
50P33190    129   RL40_TETPY Ubiquitin-60S ribosomal protein L4...530.13     36.2     34     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
51Q12285    212   MDY2_YEAST Ubiquitin-like protein MDY2 OS=Sac...980.14     37.4     29     52GO:0005634; C:nucleus; IDA:SGD.::GO:0072380; C:TRC complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000753; P:cell morphogenesis involved in conjugation with cellular fusion; IMP:SGD.::GO:0006620; P:posttranslational protein targeting to membrane; IDA:SGD.::GO:0045048; P:protein insertion into ER membrane; IGI:SGD.
52Q754R2    472   DDI1_ASHGO DNA damage-inducible protein 1 OS=...830.19     37.4     30     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:InterPro.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:InterPro.
53P62975    76   UBIQ_RABIT Ubiquitin OS=Oryctolagus cuniculus...620.2     35     29     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
54P68197    76   UBIQ_CERCA Ubiquitin OS=Ceratitis capitata (M...620.2     35     29     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
55Q865C5    76   UBIQ_CAMDR Ubiquitin OS=Camelus dromedarius (...620.2     35     29     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
56P84589    63   UBIQ_LUMTE Ubiquitin OS=Lumbricus terrestris ...500.23     34.7     34     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
57A7X5R6    1088   BAG6_ORNAN Large proline-rich protein BAG6 OS...990.24     37.4     30     46GO:0071818; C:BAT3 complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0031593; F:polyubiquitin binding; ISS:UniProtKB.::GO:0070628; F:proteasome binding; ISS:UniProtKB.::GO:0043022; F:ribosome binding; ISS:UniProtKB.
GO:0070059; P:apoptosis in response to endoplasmic reticulum stress; ISS:UniProtKB.::GO:0007420; P:brain development; ISS:UniProtKB.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0042771; P:DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; ISS:UniProtKB.::GO:0009790; P:embryo development; ISS:UniProtKB.::GO:0018393; P:internal peptidyl-lysine acetylation; ISS:UniProtKB.::GO:0001822; P:kidney development; ISS:UniProtKB.::GO:0030324; P:lung development; ISS:UniProtKB.::GO:0032435; P:negative regulation of proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0050821; P:protein stabilization; ISS:UniProtKB.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.::GO:0007130; P:synaptonemal complex assembly; ISS:UniProtKB.::GO:0071816; P:tail-anchored membrane protein insertion into ER membrane; ISS:UniProtKB.::GO:0006810; P:transport; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
58P0CH09    128   RL402_YEAST Ubiquitin-60S ribosomal protein L...530.26     35.4     32     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006412; P:translation; IEA:InterPro.
59P0CH08    128   RL401_YEAST Ubiquitin-60S ribosomal protein L...530.26     35.4     32     58GO:0022625; C:cytosolic large ribosomal subunit; TAS:SGD.::GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003735; F:structural constituent of ribosome; TAS:SGD.
GO:0002181; P:cytoplasmic translation; TAS:SGD.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0016567; P:protein ubiquitination; IMP:SGD.::GO:0042254; P:ribosome biogenesis; IDA:SGD.
60Q14DL0    610   UBQLN_MOUSE Ubiquilin-like protein OS=Mus mus...570.28     37     25     56
61P0CH07    128   RL402_SCHPO Ubiquitin-60S ribosomal protein L...530.31     35     32     58GO:0022625; C:cytosolic large ribosomal subunit; ISS:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.
GO:0003735; F:structural constituent of ribosome; ISS:PomBase.
GO:0002181; P:cytoplasmic translation; NAS:PomBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0042254; P:ribosome biogenesis; ISS:PomBase.
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