rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | P32628 | 398 | RAD23_YEAST UV excision repair protein RAD23 ... | 398 | 0 | 806 | 100 | 100 | GO:0005739; C:mitochondrion; IDA:SGD.::GO:0000111; C:nucleotide-excision repair factor 2 complex; IDA:SGD.::GO:0000502; C:proteasome complex; IMP:SGD. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IDA:SGD.::GO:0030674; F:protein binding, bridging; IPI:SGD.::GO:0043130; F:ubiquitin binding; IDA:SGD. | | | | | | | | | | GO:0030433; P:ER-associated protein catabolic process; IMP:SGD.::GO:0000715; P:nucleotide-excision repair, DNA damage recognition; TAS:SGD.::GO:0006517; P:protein deglycosylation; IDA:SGD. | 2 | O74803 | 368 | RHP23_SCHPO UV excision repair protein rhp23 ... | 402 | 3e-59 | 202 | 39 | 53 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005635; C:nuclear envelope; IDA:PomBase. | | | | | | | | | | GO:0003684; F:damaged DNA binding; ISS:PomBase.::GO:0031593; F:polyubiquitin binding; TAS:PomBase. | | | | | | | | | | GO:0030433; P:ER-associated protein catabolic process; ISS:PomBase.::GO:0042177; P:negative regulation of protein catabolic process; IMP:PomBase.::GO:0006289; P:nucleotide-excision repair; IMP:PomBase.::GO:0016567; P:protein ubiquitination; IMP:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; TAS:PomBase. | 3 | Q84L33 | 371 | RD23A_ARATH Putative DNA repair protein RAD23... | 414 | 3e-43 | 160 | 32 | 48 | GO:0005634; C:nucleus; IDA:TAIR. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0070628; F:proteasome binding; IDA:TAIR.::GO:0043130; F:ubiquitin binding; IDA:TAIR. | | | | | | | | | | GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro. | 4 | P54728 | 416 | RD23B_MOUSE UV excision repair protein RAD23 ... | 447 | 2e-40 | 153 | 30 | 43 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.::GO:0071942; C:XPC complex; ISS:UniProtKB. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro. | | | | | | | | | | GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.::GO:0007283; P:spermatogenesis; IMP:MGI. | 5 | P54726 | 363 | RD23A_MOUSE UV excision repair protein RAD23 ... | 422 | 3e-39 | 149 | 33 | 46 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro. | | | | | | | | | | GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro. | 6 | A3KMV2 | 362 | RD23A_BOVIN UV excision repair protein RAD23 ... | 423 | 4e-39 | 149 | 33 | 45 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro. | | | | | | | | | | GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro. | 7 | P54727 | 409 | RD23B_HUMAN UV excision repair protein RAD23 ... | 441 | 3e-38 | 147 | 30 | 44 | GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.::GO:0071942; C:XPC complex; IDA:UniProtKB. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0031593; F:polyubiquitin binding; IDA:UniProtKB.::GO:0003697; F:single-stranded DNA binding; TAS:ProtInc. | | | | | | | | | | GO:0000715; P:nucleotide-excision repair, DNA damage recognition; IDA:UniProtKB.::GO:0000718; P:nucleotide-excision repair, DNA damage removal; TAS:Reactome.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.::GO:0032434; P:regulation of proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB. | 8 | P54725 | 363 | RD23A_HUMAN UV excision repair protein RAD23 ... | 422 | 3e-38 | 146 | 32 | 46 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0031593; F:polyubiquitin binding; IDA:UniProtKB.::GO:0003697; F:single-stranded DNA binding; TAS:ProtInc. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0006289; P:nucleotide-excision repair; IDA:UniProtKB.::GO:0045070; P:positive regulation of viral genome replication; IMP:UniProtKB.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.::GO:0032434; P:regulation of proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB. | 9 | Q4KMA2 | 415 | RD23B_RAT UV excision repair protein RAD23 ho... | 446 | 6e-38 | 146 | 31 | 43 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.::GO:0071942; C:XPC complex; ISS:UniProtKB. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro. | | | | | | | | | | GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro. | 10 | Q84L32 | 368 | RD23B_ARATH Putative DNA repair protein RAD23... | 406 | 6e-38 | 145 | 30 | 47 | GO:0005634; C:nucleus; IDA:TAIR. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0070628; F:proteasome binding; IDA:TAIR.::GO:0043130; F:ubiquitin binding; IDA:TAIR. | | | | | | | | | | GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro. | 11 | Q40742 | 392 | RAD23_ORYSJ Probable DNA repair protein RAD23... | 423 | 6e-38 | 146 | 30 | 46 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro. | 12 | Q84L31 | 419 | RD23C_ARATH Putative DNA repair protein RAD23... | 456 | 2e-36 | 142 | 30 | 45 | GO:0005634; C:nucleus; IDA:TAIR. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0070628; F:proteasome binding; IDA:TAIR.::GO:0043130; F:ubiquitin binding; IDA:TAIR. | | | | | | | | | | GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro. | 13 | Q29RK4 | 408 | RD23B_BOVIN UV excision repair protein RAD23 ... | 438 | 2e-35 | 139 | 29 | 42 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.::GO:0071942; C:XPC complex; ISS:UniProtKB. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro. | | | | | | | | | | GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro. | 14 | Q84L30 | 378 | RD23D_ARATH Putative DNA repair protein RAD23... | 400 | 1e-33 | 134 | 31 | 48 | GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0070628; F:proteasome binding; IDA:TAIR.::GO:0043130; F:ubiquitin binding; IDA:TAIR. | | | | | | | | | | GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.::GO:0009409; P:response to cold; IEP:TAIR. | 15 | Q54LV1 | 342 | RAD23_DICDI UV excision repair protein RAD23 ... | 254 | 0.00000000000001 | 78.2 | 27 | 38 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro. | 16 | Q99NB8 | 596 | UBQL4_MOUSE Ubiquilin-4 OS=Mus musculus (Mous... | 87 | 0.000003 | 53.1 | 32 | 61 | GO:0005829; C:cytosol; IDA:MGI.::GO:0005789; C:endoplasmic reticulum membrane; IDA:MGI.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0031593; F:polyubiquitin binding; ISS:UniProtKB. | | | | | | | | | | GO:0032434; P:regulation of proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB. | 17 | Q8C5U9 | 658 | UBQL3_MOUSE Ubiquilin-3 OS=Mus musculus (Mous... | 89 | 0.000007 | 51.6 | 27 | 60 | | | | | | | | | | | | | | | | | | | | | | 18 | Q9H347 | 655 | UBQL3_HUMAN Ubiquilin-3 OS=Homo sapiens (Huma... | 98 | 0.0003 | 46.6 | 28 | 54 | | | | | | | | | | | | | | | | | | | | | | 19 | P48510 | 373 | DSK2_YEAST Ubiquitin domain-containing protei... | 66 | 0.0003 | 46.2 | 32 | 61 | GO:0005635; C:nuclear envelope; IGI:GOC. | | | | | | | | | | GO:0030674; F:protein binding, bridging; IMP:SGD. | | | | | | | | | | GO:0030433; P:ER-associated protein catabolic process; IMP:SGD.::GO:0007103; P:spindle pole body duplication in nuclear envelope; IGI:SGD. | 20 | Q9NRR5 | 601 | UBQL4_HUMAN Ubiquilin-4 OS=Homo sapiens (Huma... | 94 | 0.0003 | 46.6 | 30 | 56 | GO:0005829; C:cytosol; ISS:UniProtKB.::GO:0005789; C:endoplasmic reticulum membrane; ISS:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0031593; F:polyubiquitin binding; IDA:UniProtKB. | | | | | | | | | | GO:0032434; P:regulation of proteasomal ubiquitin-dependent protein catabolic process; IMP:UniProtKB. | 21 | Q9NIF3 | 523 | UBQL_DICDI Ubiquilin OS=Dictyostelium discoid... | 68 | 0.0006 | 45.4 | 32 | 56 | GO:0045335; C:phagocytic vesicle; IDA:dictyBase. | | | | | | | | | | | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW. | 22 | Q9UHD9 | 624 | UBQL2_HUMAN Ubiquilin-2 OS=Homo sapiens (Huma... | 112 | 0.003 | 43.5 | 27 | 54 | GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IDA:HPA. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0008219; P:cell death; IEA:UniProtKB-KW. | 23 | P46575 | 129 | RL40_EIMBO Ubiquitin-60S ribosomal protein L4... | 53 | 0.009 | 39.7 | 36 | 58 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 24 | Q54L35 | 80 | NED82_DICDI NEDD8-like protein 2 OS=Dictyoste... | 59 | 0.01 | 38.9 | 31 | 59 | | | | | | | | | | | | | | | | | | | | | | 25 | Q10169 | 354 | DSK2_SCHPO Deubiquitination-protection protei... | 67 | 0.013 | 40.8 | 27 | 58 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0031593; F:polyubiquitin binding; IDA:PomBase. | | | | | | | | | | GO:0033554; P:cellular response to stress; NAS:PomBase.::GO:0030433; P:ER-associated protein catabolic process; ISS:PomBase.::GO:0042177; P:negative regulation of protein catabolic process; IMP:PomBase.::GO:0030474; P:spindle pole body duplication; ISS:PomBase. | 26 | Q9JJP9 | 582 | UBQL1_RAT Ubiquilin-1 OS=Rattus norvegicus (R... | 97 | 0.013 | 41.2 | 28 | 51 | GO:0005783; C:endoplasmic reticulum; ISS:HGNC.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; ISS:HGNC.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0019904; F:protein domain specific binding; IPI:RGD. | | | | | | | | | | GO:0006915; P:apoptotic process; ISS:HGNC.::GO:0031396; P:regulation of protein ubiquitination; ISS:HGNC.::GO:0001666; P:response to hypoxia; ISS:HGNC. | 27 | P18101 | 128 | RL40_DROME Ubiquitin-60S ribosomal protein L4... | 53 | 0.015 | 38.9 | 34 | 58 | GO:0022625; C:cytosolic large ribosomal subunit; IDA:FlyBase.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003735; F:structural constituent of ribosome; TAS:FlyBase. | | | | | | | | | | GO:0006412; P:translation; TAS:FlyBase. | 28 | P0C276 | 128 | RL40_SHEEP Ubiquitin-60S ribosomal protein L4... | 53 | 0.017 | 38.9 | 34 | 58 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 29 | P62986 | 128 | RL40_RAT Ubiquitin-60S ribosomal protein L40 ... | 53 | 0.017 | 38.9 | 34 | 58 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 30 | P0C275 | 128 | RL40_PONPY Ubiquitin-60S ribosomal protein L4... | 53 | 0.017 | 38.9 | 34 | 58 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 31 | P63053 | 128 | RL40_PIG Ubiquitin-60S ribosomal protein L40 ... | 53 | 0.017 | 38.9 | 34 | 58 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. |