Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR515W
Length:
447
Number of sequences:
5887
Description:
YDR515W SLF1 SGDID:S000002923, Chr IV from 1473429-1474772, Genome Release 64-1-1, Verified ORF, "RNA binding protein that associates with polysomes; proposed to be involved in regulating mRNA translation; involved in the copper-dependent mineralization of copper sulfide complexes on cell surface in cells cultured in copper salts"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q12034    447   SLF1_YEAST Protein SLF1 OS=Saccharomyces cere...4470     904     100     100GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005844; C:polysome; IDA:SGD.
GO:0003723; F:RNA binding; IDA:SGD.
GO:0006878; P:cellular copper ion homeostasis; IPI:SGD.::GO:0006417; P:regulation of translation; IMP:SGD.
2P25567    434   SRO9_YEAST RNA-binding protein SRO9 OS=Saccha...1637e-30     124     42     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005844; C:polysome; IDA:SGD.
GO:0003723; F:RNA binding; IDA:SGD.
GO:0002181; P:cytoplasmic translation; IPI:SGD.
3Q6ZQ58    1072   LARP1_MOUSE La-related protein 1 OS=Mus muscu...1020.00000008     58.5     38     57
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
4Q6PKG0    1096   LARP1_HUMAN La-related protein 1 OS=Homo sapi...950.0000002     57     39     58
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
5Q9VAW5    1673   LARP_DROME La-related protein OS=Drosophila m...780.0000004     56.2     40     63GO:0005829; C:cytosol; IDA:FlyBase.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000001; P:mitochondrion inheritance; IMP:FlyBase.::GO:0035071; P:salivary gland cell autophagic cell death; IEP:FlyBase.::GO:0007053; P:spindle assembly involved in male meiosis; IMP:FlyBase.::GO:0035186; P:syncytial blastoderm mitotic cell cycle; IMP:FlyBase.
6Q659C4    914   LAR1B_HUMAN La-related protein 1B OS=Homo sap...930.0000006     55.5     40     60
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
7P40796    390   LA_DROME La protein homolog OS=Drosophila mel...600.00002     50.4     38     67GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0008098; F:5S rRNA primary transcript binding; IDA:FlyBase.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003729; F:mRNA binding; NAS:FlyBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006396; P:RNA processing; IEA:InterPro.
8Q4G0J3    582   LARP7_HUMAN La-related protein 7 OS=Homo sapi...600.00003     50.1     37     62GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
9Q4R627    581   LARP7_MACFA La-related protein 7 OS=Macaca fa...600.00003     50.1     37     62GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
10Q7ZWE3    555   LARP7_DANRE La-related protein 7 OS=Danio rer...630.00004     49.7     33     63GO:0005634; C:nucleus; IEA:InterPro.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
11Q05CL8    570   LARP7_MOUSE La-related protein 7 OS=Mus muscu...600.00008     48.5     35     63GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
12Q9P6K0    475   YLA3_SCHPO Uncharacterized HTH La-type RNA-bi...1240.0001     48.1     26     48GO:0005829; C:cytosol; IDA:PomBase.::GO:0005844; C:polysome; ISS:PomBase.
GO:0003723; F:RNA binding; ISS:PomBase.
GO:0002181; P:cytoplasmic translation; NAS:PomBase.
13Q5XI01    571   LARP7_RAT La-related protein 7 OS=Rattus norv...630.0001     48.1     33     60GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
14Q28G87    593   LARP7_XENTR La-related protein 7 OS=Xenopus t...630.0002     47.4     33     59GO:0005634; C:nucleus; IEA:InterPro.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
15P33399    275   LHP1_YEAST La protein homolog OS=Saccharomyce...460.0004     45.4     48     65GO:0005730; C:nucleolus; IDA:SGD.::GO:0005654; C:nucleoplasm; IDA:SGD.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0000049; F:tRNA binding; IDA:SGD.
GO:0008033; P:tRNA processing; IMP:SGD.
16Q71RC2    724   LARP4_HUMAN La-related protein 4 OS=Homo sapi...620.001     44.7     39     56
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007010; P:cytoskeleton organization; IMP:UniProtKB.::GO:0022604; P:regulation of cell morphogenesis; IMP:UniProtKB.
17Q9BRS8    491   LARP6_HUMAN La-related protein 6 OS=Homo sapi...500.002     43.9     36     66GO:0005794; C:Golgi apparatus; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0006396; P:RNA processing; IEA:InterPro.
18P28048    428   LAA_XENLA Lupus La protein homolog A OS=Xenop...730.002     43.9     37     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
19Q8BN59    492   LARP6_MOUSE La-related protein 6 OS=Mus muscu...500.003     43.9     36     64GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0006396; P:RNA processing; IEA:InterPro.
20Q9I7T7    1531   Y1505_DROME La-related protein CG11505 OS=Dro...690.004     43.5     33     57
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
21P87058    298   LAH1_SCHPO La protein homolog OS=Schizosaccha...490.005     42.4     47     65GO:0005634; C:nucleus; IDA:PomBase.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0034307; P:regulation of ascospore formation; IMP:PomBase.::GO:0031137; P:regulation of conjugation with cellular fusion; IMP:PomBase.::GO:0006386; P:termination of RNA polymerase III transcription; TAS:PomBase.::GO:0042779; P:tRNA 3'-trailer cleavage; IGI:PomBase.
22P10881    404   LA_BOVIN Lupus La protein homolog OS=Bos taur...590.005     42.7     36     68GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
23P05455    408   LA_HUMAN Lupus La protein OS=Homo sapiens (Hu...590.005     42.7     36     68GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; TAS:ProtInc.
GO:0003729; F:mRNA binding; TAS:ProtInc.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0000049; F:tRNA binding; TAS:ProtInc.
GO:0008334; P:histone mRNA metabolic process; TAS:ProtInc.::GO:0006400; P:tRNA modification; TAS:ProtInc.
24P28049    427   LAB_XENLA Lupus La protein homolog B OS=Xenop...730.009     42     36     59GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
25P38656    415   LA_RAT Lupus La protein homolog OS=Rattus nor...590.015     41.2     36     66GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0008033; P:tRNA processing; IMP:RGD.
26P32067    415   LA_MOUSE Lupus La protein homolog OS=Mus musc...590.015     41.2     36     66GO:0005634; C:nucleus; IDA:MGI.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:MGI.
GO:0006396; P:RNA processing; IEA:InterPro.
27Q8BWW4    719   LARP4_MOUSE La-related protein 4 OS=Mus muscu...620.057     39.7     35     53
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007010; P:cytoskeleton organization; ISS:UniProtKB.::GO:0022604; P:regulation of cell morphogenesis; ISS:UniProtKB.
28Q26457    383   LA_AEDAL La protein homolog OS=Aedes albopict...450.15     37.7     36     69GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
29Q2S254    908   MUTS_SALRD DNA mismatch repair protein MutS O...343.6     33.9     41     65
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
30P20052    293   PHO80_YEAST PHO85 cyclin PHO80 OS=Saccharomyc...598.2     32.3     36     53GO:0000307; C:cyclin-dependent protein kinase holoenzyme complex; IPI:SGD.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:SGD.
GO:0016538; F:cyclin-dependent protein kinase regulator activity; IDA:SGD.::GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0006875; P:cellular metal ion homeostasis; IMP:SGD.::GO:0050849; P:negative regulation of calcium-mediated signaling; IGI:SGD.::GO:0016242; P:negative regulation of macroautophagy; IMP:SGD.::GO:0045936; P:negative regulation of phosphate metabolic process; IGI:SGD.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IGI:SGD.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IDA:SGD.::GO:0032880; P:regulation of protein localization; IMP:SGD.
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