Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR496C
Length:
656
Number of sequences:
5887
Description:
YDR496C PUF6 SGDID:S000002904, Chr IV from 1443403-1441433, Genome Release 64-1-1, reverse complement, Verified ORF, "Pumilio-homology domain protein that binds the 3' UTR of ASH1 mRNA and represses its translation, resulting in proper asymmetric localization of ASH1 mRNA; also co-sediments with the 60S ribosomal subunit and is required for its biogenesis"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31P53109    570   AIM14_YEAST Probable metalloreductase AIM14 O...1370.99     36.2     26     45GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0009055; F:electron carrier activity; IEA:InterPro.::GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0005506; F:iron ion binding; IEA:InterPro.::GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.
GO:0022900; P:electron transport chain; IEA:UniProtKB-KW.::GO:0006811; P:ion transport; IEA:UniProtKB-KW.
32A6ZU25    570   AIM14_YEAS7 Probable metalloreductase AIM14 O...1371.4     35.8     26     45GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0009055; F:electron carrier activity; IEA:InterPro.::GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0005506; F:iron ion binding; IEA:InterPro.::GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.
GO:0022900; P:electron transport chain; IEA:UniProtKB-KW.::GO:0006811; P:ion transport; IEA:UniProtKB-KW.
33B3LHL3    570   AIM14_YEAS1 Probable metalloreductase AIM14 O...1371.4     35.8     26     45GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0009055; F:electron carrier activity; IEA:InterPro.::GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0005506; F:iron ion binding; IEA:InterPro.::GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.
GO:0022900; P:electron transport chain; IEA:UniProtKB-KW.::GO:0006811; P:ion transport; IEA:UniProtKB-KW.
34Q9V5N8    3579   STAN_DROME Protocadherin-like wing polarity p...1201.6     35.8     30     43GO:0005911; C:cell-cell junction; IDA:FlyBase.::GO:0016021; C:integral to membrane; NAS:UniProtKB.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0004930; F:G-protein coupled receptor activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0005057; F:receptor signaling protein activity; IMP:UniProtKB.
GO:0007411; P:axon guidance; IMP:FlyBase.::GO:0016339; P:calcium-dependent cell-cell adhesion; IMP:UniProtKB.::GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.::GO:0070593; P:dendrite self-avoidance; IMP:FlyBase.::GO:0007156; P:homophilic cell adhesion; IDA:FlyBase.::GO:0016319; P:mushroom body development; IMP:FlyBase.::GO:0030178; P:negative regulation of Wnt receptor signaling pathway; TAS:FlyBase.::GO:0007218; P:neuropeptide signaling pathway; IEA:InterPro.::GO:0030177; P:positive regulation of Wnt receptor signaling pathway; NAS:FlyBase.::GO:0007464; P:R3/R4 cell fate commitment; NAS:FlyBase.::GO:0048057; P:R3/R4 development; IMP:FlyBase.::GO:0050770; P:regulation of axonogenesis; IDA:FlyBase.::GO:0051963; P:regulation of synapse assembly; IDA:FlyBase.::GO:0035159; P:regulation of tube length, open tracheal system; IMP:FlyBase.::GO:0007367; P:segment polarity determination; IMP:UniProtKB.::GO:0016055; P:Wnt receptor signaling pathway; IMP:FlyBase.
35B6Q5P5    697   NOP9_PENMQ Nucleolar protein 9 OS=Penicillium...901.7     35.4     29     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
36Q9LUL5    710   PP229_ARATH Pentatricopeptide repeat-containi...1821.7     35.4     26     38
GO:0005488; F:binding; IEA:InterPro.
37Q9FMH4    527   PUM13_ARATH Putative pumilio homolog 13 OS=Ar...1231.8     35.4     24     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
38C8Z891    576   AIM14_YEAS8 Probable metalloreductase AIM14 O...1371.8     35.4     26     45GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0009055; F:electron carrier activity; IEA:InterPro.::GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0005506; F:iron ion binding; IEA:InterPro.::GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.
GO:0022900; P:electron transport chain; IEA:UniProtKB-KW.::GO:0006811; P:ion transport; IEA:UniProtKB-KW.
39Q9P789    1060   YN8E_SCHPO Pumilio domain-containing protein ...1572     35.4     21     43GO:0005829; C:cytosol; IDA:PomBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
40O94462    732   PUF3_SCHPO mRNA-binding protein puf3 OS=Schiz...1023.4     34.7     23     51GO:0005829; C:cytosol; IDA:PomBase.::GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
GO:0003729; F:mRNA binding; ISS:PomBase.
GO:0033554; P:cellular response to stress; IEP:PomBase.::GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; ISS:PomBase.
41A8YVQ7    870   IF2_LACH4 Translation initiation factor IF-2 ...863.4     34.7     29     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
42Q92359    681   YDHE_SCHPO Pumilio domain-containing protein ...1804.4     34.3     21     45GO:0005829; C:cytosol; IDA:PomBase.
GO:0003729; F:mRNA binding; ISS:PomBase.
GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; ISS:PomBase.
43Q9LXC5    517   PUM21_ARATH Putative pumilio homolog 21 OS=Ar...846.9     33.5     26     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
44O59923    519   SIR2_CANAL NAD-dependent histone deacetylase ...695     33.9     32     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.::GO:0070403; F:NAD+ binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000183; P:chromatin silencing at rDNA; IMP:CGD.::GO:0001319; P:inheritance of oxidatively modified proteins involved in replicative cell aging; IMP:CGD.::GO:0006476; P:protein deacetylation; IEA:InterPro.::GO:0045595; P:regulation of cell differentiation; IMP:CGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
45P26044    583   RADI_PIG Radixin OS=Sus scrofa (Pig). GN=RDX ...1228.9     33.1     24     47GO:0032154; C:cleavage furrow; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0019898; C:extrinsic to membrane; IEA:InterPro.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
GO:0051693; P:actin filament capping; IEA:UniProtKB-KW.
46P26043    583   RADI_MOUSE Radixin OS=Mus musculus (Mouse). G...1229     33.1     24     47GO:0045177; C:apical part of cell; IDA:MGI.::GO:0032154; C:cleavage furrow; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0019898; C:extrinsic to membrane; IEA:InterPro.::GO:0030175; C:filopodium; IDA:MGI.::GO:0030027; C:lamellipodium; IDA:MGI.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0001726; C:ruffle; IDA:MGI.::GO:0032420; C:stereocilium; IDA:MGI.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
GO:0051693; P:actin filament capping; IEA:UniProtKB-KW.::GO:0045176; P:apical protein localization; IMP:MGI.::GO:0030033; P:microvillus assembly; IMP:MGI.
47P35241    583   RADI_HUMAN Radixin OS=Homo sapiens (Human). G...1229     33.1     24     47GO:0032154; C:cleavage furrow; IEA:UniProtKB-SubCell.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0019898; C:extrinsic to membrane; IEA:InterPro.::GO:0005794; C:Golgi apparatus; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.::GO:0005886; C:plasma membrane; IDA:HPA.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
GO:0051693; P:actin filament capping; IEA:UniProtKB-KW.
48Q32LP2    583   RADI_BOVIN Radixin OS=Bos taurus (Bovine). GN...1229     33.1     24     47GO:0032154; C:cleavage furrow; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0019898; C:extrinsic to membrane; IEA:InterPro.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
GO:0051693; P:actin filament capping; IEA:UniProtKB-KW.
49Q9PU45    583   RADI_CHICK Radixin OS=Gallus gallus (Chicken)...1229.3     33.1     24     47GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0019898; C:extrinsic to membrane; IEA:InterPro.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
GO:0051693; P:actin filament capping; IEA:UniProtKB-KW.
records
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