Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR488C
Length:
533
Number of sequences:
5887
Description:
YDR488C PAC11 SGDID:S000002896, Chr IV from 1430789-1429188, Genome Release 64-1-1, reverse complement, Verified ORF, "Dynein intermediate chain, acts in the cytoplasmic dynein pathway, forms cortical cytoplasmic microtubule capture site with Num1p; null mutant is defective in nuclear migration, essential in the absence of CIN8"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P40960    533   PAC11_YEAST WD repeat-containing protein PAC1...5330     1109     100     100GO:0005868; C:cytoplasmic dynein complex; TAS:SGD.::GO:0005881; C:cytoplasmic microtubule; IDA:SGD.
GO:0030473; P:nuclear migration along microtubule; IMP:SGD.
2Q24246    663   DYIN_DROME Cytoplasmic dynein 1 intermediate ...2360.000002     54.7     23     42GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005765; C:lysosomal membrane; IEA:UniProtKB-SubCell.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
GO:0045503; F:dynein light chain binding; IPI:FlyBase.::GO:0003774; F:motor activity; IEA:UniProtKB-KW.
GO:0008088; P:axon cargo transport; IMP:FlyBase.::GO:0051642; P:centrosome localization; IMP:FlyBase.::GO:0016482; P:cytoplasmic transport; IMP:FlyBase.::GO:0001754; P:eye photoreceptor cell differentiation; IGI:FlyBase.::GO:0007291; P:sperm individualization; IMP:FlyBase.::GO:0007051; P:spindle organization; IMP:FlyBase.
3Q499N3    431   WDR18_RAT WD repeat-containing protein 18 OS=...1000.00006     49.3     35     49
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
4O88485    628   DC1I1_MOUSE Cytoplasmic dynein 1 intermediate...2270.0008     45.8     24     40GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005868; C:cytoplasmic dynein complex; ISS:UniProtKB.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0048471; C:perinuclear region of cytoplasm; ISS:HGNC.::GO:0000922; C:spindle pole; ISS:UniProtKB.::GO:0031982; C:vesicle; ISS:UniProtKB.
GO:0008017; F:microtubule binding; ISS:HGNC.::GO:0003777; F:microtubule motor activity; ISS:HGNC.
GO:0047496; P:vesicle transport along microtubule; ISS:HGNC.
5Q29RQ3    608   DC1I1_BOVIN Cytoplasmic dynein 1 intermediate...2270.0008     45.8     24     40GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005868; C:cytoplasmic dynein complex; IDA:UniProtKB.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.::GO:0031982; C:vesicle; ISS:UniProtKB.
GO:0003774; F:motor activity; IEA:UniProtKB-KW.
GO:0006810; P:transport; IEA:UniProtKB-KW.
6O14576    645   DC1I1_HUMAN Cytoplasmic dynein 1 intermediate...2270.001     45.4     24     40GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005868; C:cytoplasmic dynein complex; ISS:UniProtKB.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0048471; C:perinuclear region of cytoplasm; ISS:HGNC.::GO:0000922; C:spindle pole; IDA:UniProtKB.::GO:0031982; C:vesicle; IDA:UniProtKB.
GO:0008017; F:microtubule binding; ISS:HGNC.::GO:0003777; F:microtubule motor activity; ISS:HGNC.
GO:0047496; P:vesicle transport along microtubule; ISS:HGNC.
7Q63100    643   DC1I1_RAT Cytoplasmic dynein 1 intermediate c...2270.001     45.4     24     40GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005868; C:cytoplasmic dynein complex; ISS:UniProtKB.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0048471; C:perinuclear region of cytoplasm; IDA:HGNC.::GO:0000922; C:spindle pole; ISS:UniProtKB.::GO:0031982; C:vesicle; ISS:UniProtKB.
GO:0008017; F:microtubule binding; IDA:HGNC.::GO:0003777; F:microtubule motor activity; IDA:HGNC.
GO:0047496; P:vesicle transport along microtubule; IDA:HGNC.
8Q62871    638   DC1I2_RAT Cytoplasmic dynein 1 intermediate c...2310.002     44.3     22     39GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0031982; C:vesicle; ISS:UniProtKB.
GO:0003774; F:motor activity; IEA:UniProtKB-KW.
GO:0007018; P:microtubule-based movement; TAS:RGD.::GO:0006810; P:transport; IEA:UniProtKB-KW.
9O88487    612   DC1I2_MOUSE Cytoplasmic dynein 1 intermediate...2310.003     43.9     22     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0031982; C:vesicle; ISS:UniProtKB.
GO:0003774; F:motor activity; IEA:UniProtKB-KW.
GO:0006810; P:transport; IEA:UniProtKB-KW.
10Q0III3    612   DC1I2_BOVIN Cytoplasmic dynein 1 intermediate...2310.004     43.9     22     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0031982; C:vesicle; ISS:UniProtKB.
GO:0003774; F:motor activity; IEA:UniProtKB-KW.
GO:0006810; P:transport; IEA:UniProtKB-KW.
11Q5NVM2    638   DC1I2_PONAB Cytoplasmic dynein 1 intermediate...2310.004     43.5     22     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0031982; C:vesicle; ISS:UniProtKB.
GO:0003774; F:motor activity; IEA:UniProtKB-KW.
GO:0006810; P:transport; IEA:UniProtKB-KW.
12Q13409    638   DC1I2_HUMAN Cytoplasmic dynein 1 intermediate...2310.004     43.5     22     39GO:0005813; C:centrosome; IDA:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0031982; C:vesicle; IDA:UniProtKB.
GO:0003777; F:microtubule motor activity; NAS:UniProtKB.
GO:0000086; P:G2/M transition of mitotic cell cycle; TAS:Reactome.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0007018; P:microtubule-based movement; NAS:UniProtKB.::GO:0006810; P:transport; IEA:UniProtKB-KW.
13Q4VBE8    431   WDR18_MOUSE WD repeat-containing protein 18 O...1000.014     41.6     33     49
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
14Q9NRL3    753   STRN4_HUMAN Striatin-4 OS=Homo sapiens (Human...780.056     40     37     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0070016; F:armadillo repeat domain binding; IPI:UniProtKB.::GO:0005516; F:calmodulin binding; NAS:UniProtKB.::GO:0032403; F:protein complex binding; IDA:UniProtKB.::GO:0051721; F:protein phosphatase 2A binding; IDA:UniProtKB.
15Q54DS4    1823   Y2056_DICDI WD repeat-containing protein DDB_...640.11     39.3     31     59
16O61585    690   KTNB1_STRPU Katanin p80 WD40-containing subun...1080.12     38.9     31     46GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
17Q3SZD4    432   WDR18_BOVIN WD repeat-containing protein 18 O...1000.18     38.1     33     46
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
18Q68EI0    431   WDR18_DANRE WD repeat-containing protein 18 O...1020.19     38.1     30     46
GO:0007368; P:determination of left/right symmetry; IMP:UniProtKB.::GO:0070121; P:Kupffer's vesicle development; IMP:UniProtKB.
19Q8IDX6    3130   RBP2A_PLAF7 Reticulocyte-binding protein 2 ho...1330.22     38.1     24     43GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0004872; F:receptor activity; IEA:UniProtKB-KW.
GO:0016337; P:cell-cell adhesion; ISS:UniProtKB.
20P58404    760   STRN4_MOUSE Striatin-4 OS=Mus musculus (Mouse...780.23     38.1     36     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
21O22212    554   PRP4_ARATH U4/U6 small nuclear ribonucleoprot...840.26     37.7     32     46GO:0016607; C:nuclear speck; IDA:TAIR.
GO:0001709; P:cell fate determination; IMP:TAIR.::GO:0007267; P:cell-cell signaling; IMP:TAIR.::GO:0009560; P:embryo sac egg cell differentiation; IMP:TAIR.::GO:0008380; P:RNA splicing; IEA:InterPro.
22P25635    923   PWP2_YEAST Periodic tryptophan protein 2 OS=S...1100.26     37.7     35     46GO:0005737; C:cytoplasm; IDA:SGD.::GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; IPI:SGD.
GO:0000910; P:cytokinesis; IMP:SGD.::GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0030010; P:establishment of cell polarity; IMP:SGD.
23Q5RFQ3    918   PWP2_PONAB Periodic tryptophan protein 2 homo...1630.38     37.4     28     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
24Q9W5Z5    427   WSB1_TAKRU WD repeat and SOCS box-containing ...1440.39     37     26     35
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
25Q15269    919   PWP2_HUMAN Periodic tryptophan protein 2 homo...1630.39     37.4     28     44GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
GO:0004871; F:signal transducer activity; TAS:ProtInc.
26P74442    1191   Y143_SYNY3 Uncharacterized WD repeat-containi...1280.56     37     27     41
27Q9BV38    432   WDR18_HUMAN WD repeat-containing protein 18 O...1070.96     35.8     31     50
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
28Q7ZVR1    832   WDR75_DANRE WD repeat-containing protein 75 O...651     35.8     35     55GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
29O94518    544   DIC1_SCHPO Dynein intermediate chain 1 OS=Sch...991.1     35.8     21     43GO:0005829; C:cytosol; IDA:PomBase.::GO:0030286; C:dynein complex; TAS:PomBase.
GO:0030437; P:ascospore formation; IMP:PomBase.::GO:0030989; P:dynein-driven meiotic oscillatory nuclear movement; IMP:PomBase.
30Q5TTP0    1059   WDY_ANOGA WD repeat-containing protein on Y c...541.1     35.8     48     54
GO:0005509; F:calcium ion binding; IEA:InterPro.
31B6GZD3    464   LIS12_PENCW Nuclear distribution protein nudF...821.2     35.4     28     48GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
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