FGC: Single Locus Summary

UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YDR478W

Length:

198

Number of sequences:

5887

Description:

YDR478W SNM1 SGDID:S000002886, Chr IV from 1414575-1415171, Genome Release 64-1-1, Verified ORF, "Subunit of RNase MRP, which cleaves pre-rRNA and has a role in cell cycle-regulated degradation of daughter cell-specific mRNAs; binds to the NME1 RNA subunit of RNase MRP"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
1	P40993	198	RMRP_YEAST Ribonuclease MRP protein subunit S...	198	4e-143	404	100	100	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000172; C:ribonuclease MRP complex; TAS:SGD.
									GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IDA:SGD.
									GO:0006379; P:mRNA cleavage; IPI:SGD.::GO:0006364; P:rRNA processing; TAS:SGD.
2	O94306	184	YCGJ_SCHPO Uncharacterized protein C16C4.19 O...	146	2.3	32	23	47	GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0000172; C:ribonuclease MRP complex; ISS:PomBase.

									GO:0006379; P:mRNA cleavage; ISS:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; ISS:PomBase.
3	Q9V166	117	RNP4_PYRAB Ribonuclease P protein component 4...	37	4.3	30.4	35	59
									GO:0004526; F:ribonuclease P activity; IEA:HAMAP.
									GO:0001682; P:tRNA 5'-leader removal; IEA:HAMAP.
4	Q8TTY5	107	RNP4_METAC Ribonuclease P protein component 4...	65	5.8	30	34	45
									GO:0004526; F:ribonuclease P activity; IEA:EC.
									GO:0001682; P:tRNA 5'-leader removal; IEA:InterPro.
5	Q2NGR3	104	RNP4_METST Ribonuclease P protein component 4...	59	6.3	29.6	32	44
									GO:0004526; F:ribonuclease P activity; IEA:EC.
									GO:0001682; P:tRNA 5'-leader removal; IEA:InterPro.
6	Q8PWM8	107	RNP4_METMA Ribonuclease P protein component 4...	65	9	29.3	29	43
									GO:0004526; F:ribonuclease P activity; IEA:EC.
									GO:0001682; P:tRNA 5'-leader removal; IEA:InterPro.

records

‹‹

››

Total records:

1 - 6

Elimate unknown annotation:

Filter for keyword on hit description:

Select upper E value:

Select lower bit score:

Select lower %idenity value:

Select lower %positive value:

Taxonomic division:

Lower limit on hit length:

Lower limit on alignment length::