Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR460W
Length:
321
Number of sequences:
5887
Description:
YDR460W TFB3 SGDID:S000002868, Chr IV from 1383811-1384776, Genome Release 64-1-1, Verified ORF, "Subunit of TFIIH and nucleotide excision repair factor 3 complexes, involved in transcription initiation, required for nucleotide excision repair; ring finger protein similar to mammalian CAK and TFIIH subunit"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31O60229    2985   KALRN_HUMAN Kalirin OS=Homo sapiens (Human). ...2221.5     34.7     21     44GO:0015629; C:actin cytoskeleton; TAS:ProtInc.::GO:0005829; C:cytosol; TAS:Reactome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005543; F:phospholipid binding; IEA:InterPro.::GO:0004674; F:protein serine/threonine kinase activity; TAS:ProtInc.::GO:0005089; F:Rho guanyl-nucleotide exchange factor activity; IEA:InterPro.
GO:0006915; P:apoptotic process; TAS:Reactome.::GO:0008624; P:induction of apoptosis by extracellular signals; TAS:Reactome.::GO:0048011; P:nerve growth factor receptor signaling pathway; TAS:Reactome.::GO:0007399; P:nervous system development; ISS:HGNC.::GO:0035023; P:regulation of Rho protein signal transduction; IEA:InterPro.::GO:0007264; P:small GTPase mediated signal transduction; TAS:Reactome.::GO:0016192; P:vesicle-mediated transport; TAS:ProtInc.
32Q9VB08    435   RING1_DROME E3 ubiquitin-protein ligase RING1...441.6     34.3     36     43GO:0008278; C:cohesin complex; IDA:UniProtKB.::GO:0035102; C:PRC1 complex; TAS:FlyBase.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006342; P:chromatin silencing; IDA:UniProtKB.::GO:0030708; P:germarium-derived female germ-line cyst encapsulation; IMP:FlyBase.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0022008; P:neurogenesis; IMP:FlyBase.::GO:0030713; P:ovarian follicle cell stalk formation; IMP:FlyBase.::GO:0045498; P:sex comb development; IDA:UniProtKB.::GO:0007062; P:sister chromatid cohesion; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
33Q9V262    305   ASGX_PYRAB Putative L-asparaginase OS=Pyrococ...461.6     33.9     39     59
GO:0004067; F:asparaginase activity; IEA:EC.::GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.::GO:0008233; F:peptidase activity; IEA:UniProtKB-KW.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
34Q5EB20    978   FA65C_DANRE Protein FAM65C OS=Danio rerio (Ze...822     33.9     28     48
GO:0005488; F:binding; IEA:InterPro.
35Q99496    336   RING2_HUMAN E3 ubiquitin-protein ligase RING2...442.5     33.5     34     41GO:0071339; C:MLL1 complex; IDA:UniProtKB.::GO:0035102; C:PRC1 complex; IDA:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; IDA:UniProtKB.
GO:0071535; F:RING-like zinc finger domain binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IDA:UniProtKB.
GO:0035518; P:histone H2A monoubiquitination; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
36Q9CQJ4    336   RING2_MOUSE E3 ubiquitin-protein ligase RING2...442.5     33.5     34     41GO:0071339; C:MLL1 complex; ISS:UniProtKB.::GO:0016604; C:nuclear body; IDA:MGI.::GO:0001739; C:sex chromatin; IDA:MGI.::GO:0000151; C:ubiquitin ligase complex; ISS:UniProtKB.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:MGI.::GO:0008270; F:zinc ion binding; ISS:UniProtKB.
GO:0009948; P:anterior/posterior axis specification; IMP:MGI.::GO:0001702; P:gastrulation with mouth forming second; IMP:MGI.::GO:0000278; P:mitotic cell cycle; IMP:MGI.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
37Q69V23    1093   CESA3_ORYSJ Probable cellulose synthase A cat...652.6     33.5     28     45GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0016760; F:cellulose synthase (UDP-forming) activity; IEA:EC.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007047; P:cellular cell wall organization; IEA:UniProtKB-KW.::GO:0030244; P:cellulose biosynthetic process; IEA:UniProtKB-KW.
38Q80XI3    1579   IF4G3_MOUSE Eukaryotic translation initiation...1992.9     33.5     22     42
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0007128; P:meiotic prophase I; IMP:MGI.::GO:0001934; P:positive regulation of protein phosphorylation; IMP:MGI.::GO:0045727; P:positive regulation of translation; IMP:MGI.::GO:0016070; P:RNA metabolic process; IEA:InterPro.::GO:0007283; P:spermatogenesis; IMP:MGI.
39Q5R9J5    336   RING2_PONAB E3 ubiquitin-protein ligase RING2...443     33.1     34     41GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0071339; C:MLL1 complex; ISS:UniProtKB.::GO:0035102; C:PRC1 complex; ISS:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; ISS:UniProtKB.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; ISS:UniProtKB.
GO:0016567; P:protein ubiquitination; ISS:GOC.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
40Q851L8    1092   CESA5_ORYSJ Probable cellulose synthase A cat...633.1     33.5     30     43GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0016760; F:cellulose synthase (UDP-forming) activity; IEA:EC.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007047; P:cellular cell wall organization; IEA:UniProtKB-KW.::GO:0030244; P:cellulose biosynthetic process; IEA:UniProtKB-KW.
41A2XNT2    1092   CESA5_ORYSI Probable cellulose synthase A cat...633.1     33.5     30     43GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0016760; F:cellulose synthase (UDP-forming) activity; IEA:EC.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007047; P:cellular cell wall organization; IEA:UniProtKB-KW.::GO:0030244; P:cellulose biosynthetic process; IEA:UniProtKB-KW.
42Q4KLY4    308   RING2_RAT E3 ubiquitin-protein ligase RING2 O...443.2     33.1     34     41GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0071339; C:MLL1 complex; ISS:UniProtKB.::GO:0035102; C:PRC1 complex; ISS:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; ISS:UniProtKB.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; ISS:UniProtKB.
GO:0016567; P:protein ubiquitination; ISS:GOC.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
43Q803I4    336   RING2_DANRE E3 ubiquitin-protein ligase RING2...443.2     33.1     34     41GO:0071339; C:MLL1 complex; ISS:UniProtKB.::GO:0035102; C:PRC1 complex; ISS:UniProtKB.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
44Q9JMH9    2050   MY18A_MOUSE Unconventional myosin-XVIIIa OS=M...973.3     33.5     26     54GO:0005793; C:endoplasmic reticulum-Golgi intermediate compartment; IEA:UniProtKB-SubCell.::GO:0016459; C:myosin complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003774; F:motor activity; IEA:InterPro.
45A6NNT2    1141   CP096_HUMAN Putative uncharacterized protein ...883.4     33.5     24     52
46Q9JIR0    1847   RIMB1_RAT Peripheral-type benzodiazepine rece...1193.8     33.1     27     46GO:0005739; C:mitochondrion; IDA:RGD.
47Q554P0    787   BZPJ_DICDI Probable basic-leucine zipper tran...1003.9     33.1     30     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
48Q12TF9    449   PROA_METBU Gamma-glutamyl phosphate reductase...473.9     32.7     36     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004350; F:glutamate-5-semialdehyde dehydrogenase activity; IEA:EC.::GO:0050661; F:NADP binding; IEA:InterPro.
GO:0006561; P:proline biosynthetic process; IEA:UniProtKB-KW.
49P97924    2959   KALRN_RAT Kalirin OS=Rattus norvegicus (Rat)....2204     33.1     22     45GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0043005; C:neuron projection; IDA:RGD.::GO:0043025; C:neuronal cell body; IDA:RGD.::GO:0048471; C:perinuclear region of cytoplasm; IDA:RGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005543; F:phospholipid binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:RGD.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.::GO:0005089; F:Rho guanyl-nucleotide exchange factor activity; IEA:InterPro.
GO:0007409; P:axonogenesis; IDA:RGD.::GO:0035556; P:intracellular signal transduction; IDA:HGNC.::GO:0050773; P:regulation of dendrite development; IDA:RGD.::GO:0035023; P:regulation of Rho protein signal transduction; IEA:InterPro.
50Q92614    2054   MY18A_HUMAN Unconventional myosin-XVIIIa OS=H...1444.7     32.7     23     46GO:0042641; C:actomyosin; IDA:UniProtKB.::GO:0005793; C:endoplasmic reticulum-Golgi intermediate compartment; IEA:UniProtKB-SubCell.::GO:0016459; C:myosin complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0008094; F:DNA-dependent ATPase activity; IEA:InterPro.::GO:0003774; F:motor activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0031032; P:actomyosin structure organization; IMP:UniProtKB.::GO:0006916; P:anti-apoptosis; TAS:ProtInc.::GO:0016477; P:cell migration; IMP:UniProtKB.::GO:0006259; P:DNA metabolic process; IEA:InterPro.
51Q8GT74    241   NIP2_ARATH NEP1-interacting protein 2 OS=Arab...515.2     32     33     45GO:0009535; C:chloroplast thylakoid membrane; IDA:TAIR.::GO:0031351; C:integral to plastid membrane; IDA:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009299; P:mRNA transcription; IPI:TAIR.::GO:0009416; P:response to light stimulus; IEP:TAIR.
52Q66J69    344   RNG2A_XENLA E3 ubiquitin-protein ligase RING2...446.1     32     34     41GO:0071339; C:MLL1 complex; ISS:UniProtKB.::GO:0035102; C:PRC1 complex; ISS:UniProtKB.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
53Q7ZWM8    343   RNG2B_XENLA E3 ubiquitin-protein ligase RING2...446.7     32     34     41GO:0071339; C:MLL1 complex; ISS:UniProtKB.::GO:0035102; C:PRC1 complex; ISS:UniProtKB.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
54P59348    427   Y6755_BRAJA UPF0229 protein bll6755 OS=Bradyr...917.8     32     30     44
55A6W5T1    1293   RPOC_KINRD DNA-directed RNA polymerase subuni...608     32     35     55
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
56Q5UP23    398   YR260_MIMIV DnaJ-like protein R260 OS=Acantha...889.6     31.6     23     45
GO:0031072; F:heat shock protein binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0051082; F:unfolded protein binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
57B5EBG7    434   HEM1_GEOBB Glutamyl-tRNA reductase OS=Geobact...809.8     31.6     26     45
GO:0008883; F:glutamyl-tRNA reductase activity; IEA:EC.::GO:0050661; F:NADP binding; IEA:InterPro.
GO:0006779; P:porphyrin-containing compound biosynthetic process; IEA:UniProtKB-KW.
records
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