rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | Q02354 | 440 | UTP6_YEAST U3 small nucleolar RNA-associated ... | 440 | 0 | 903 | 100 | 100 | GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD. | | | | | | | | | | GO:0030515; F:snoRNA binding; IPI:SGD. | | | | | | | | | | GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD. | 2 | O60188 | 488 | UTP6_SCHPO U3 small nucleolar RNA-associated ... | 201 | 3e-37 | 146 | 34 | 60 | GO:0032153; C:cell division site; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase. | | | | | | | | | | GO:0030515; F:snoRNA binding; ISS:PomBase. | | | | | | | | | | GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase. | 3 | Q8VCY6 | 597 | UTP6_MOUSE U3 small nucleolar RNA-associated ... | 189 | 5e-26 | 114 | 33 | 56 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 4 | Q9NYH9 | 597 | UTP6_HUMAN U3 small nucleolar RNA-associated ... | 81 | 3.7 | 33.5 | 30 | 48 | GO:0005730; C:nucleolus; IDA:HPA. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 5 | Q54WN5 | 609 | UTP6_DICDI U3 small nucleolar RNA-associated ... | 201 | 3e-18 | 90.9 | 28 | 50 | GO:0005813; C:centrosome; IDA:dictyBase.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:dictyBase. | | | | | | | | | | GO:0030515; F:snoRNA binding; ISS:dictyBase. | | | | | | | | | | GO:0030490; P:maturation of SSU-rRNA; ISS:dictyBase. | 6 | Q4PB37 | 781 | CLF1_USTMA Pre-mRNA-splicing factor CLF1 OS=U... | 159 | 0.000003 | 53.5 | 21 | 45 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 7 | Q9HF03 | 724 | CLF1_CRYNV Pre-mRNA-splicing factor CLF1 OS=g... | 162 | 0.002 | 44.7 | 23 | 43 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 8 | P0CO10 | 726 | CLF1_CRYNJ Pre-mRNA-splicing factor CLF1 OS=A... | 162 | 0.002 | 44.3 | 23 | 43 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 9 | P0CO11 | 726 | CLF1_CRYNB Pre-mRNA-splicing factor CLF1 OS=(... | 162 | 0.002 | 44.3 | 23 | 43 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 10 | Q6CJK2 | 684 | CLF1_KLULA Pre-mRNA-splicing factor CLF1 OS=1... | 107 | 5.9 | 33.1 | 24 | 43 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 11 | Q9BZJ0 | 848 | CRNL1_HUMAN Crooked neck-like protein 1 OS=Ho... | 173 | 0.001 | 45.1 | 21 | 45 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IDA:UniProtKB. | | | | | | | | | | GO:0000245; P:spliceosomal complex assembly; IDA:UniProtKB. | 12 | P63155 | 690 | CRNL1_RAT Crooked neck-like protein 1 OS=Ratt... | 162 | 0.001 | 44.7 | 22 | 44 | | | | | | | | | | | GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB. | 13 | P63154 | 690 | CRNL1_MOUSE Crooked neck-like protein 1 OS=Mu... | 162 | 0.001 | 44.7 | 22 | 44 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB. | 14 | Q7SGD2 | 695 | CLF1_NEUCR Pre-mRNA-splicing factor clf-1 OS=... | 44 | 6.4 | 33.1 | 32 | 57 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 15 | Q527H0 | 691 | CLF1_MAGO7 Pre-mRNA-splicing factor CLF1 OS=b... | 173 | 7.2 | 32.7 | 21 | 42 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 16 | Q4WT84 | 676 | CLF1_ASPFU Pre-mRNA-splicing factor clf1 OS=A... | 187 | 0.48 | 36.6 | 23 | 44 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 17 | P19735 | 899 | PRP6_YEAST Pre-mRNA-splicing factor 6 OS=Sacc... | 140 | 0.025 | 40.8 | 26 | 44 | GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IPI:SGD. | 18 | Q750X3 | 683 | CLF1_ASHGO Pre-mRNA-splicing factor CLF1 OS=Y... | 59 | 2.8 | 34.3 | 29 | 49 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 19 | Q5K654 | 677 | CLF1_PARBR Pre-mRNA-splicing factor CLF1 OS=P... | 161 | 4.9 | 33.5 | 19 | 39 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 20 | Q5BDX1 | 673 | CLF1_EMENI Pre-mRNA-splicing factor clf1 OS=1... | 187 | 1.3 | 35 | 23 | 44 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 21 | Q6BSP7 | 714 | CLF1_DEBHA Pre-mRNA-splicing factor CLF1 OS=0... | 59 | 0.14 | 38.1 | 32 | 51 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 22 | Q6FW76 | 695 | CLF1_CANGA Pre-mRNA-splicing factor CLF1 OS=N... | 171 | 0.077 | 39.3 | 21 | 44 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 23 | Q6C186 | 676 | CLF1_YARLI Pre-mRNA-splicing factor CLF1 OS=l... | 79 | 0.13 | 38.5 | 24 | 47 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 24 | P87312 | 674 | CLF1_SCHPO Pre-mRNA-splicing factor cwf4 OS=S... | 83 | 4.5 | 33.5 | 23 | 46 | GO:0005681; C:spliceosomal complex; IDA:PomBase. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IC:PomBase. | 25 | Q5B3I8 | 1075 | RNA14_EMENI mRNA 3'-end-processing protein rn... | 98 | 0.36 | 37 | 26 | 48 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 26 | Q2KJJ0 | 941 | PRP6_BOVIN Pre-mRNA-processing factor 6 OS=Bo... | 63 | 0.4 | 37 | 32 | 46 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro. | 27 | Q4PCV8 | 945 | RNA14_USTMA mRNA 3'-end-processing protein RN... | 53 | 5 | 33.5 | 32 | 51 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 28 | A7MB10 | 1874 | RRP5_BOVIN Protein RRP5 homolog OS=Bos taurus... | 99 | 0.5 | 36.6 | 24 | 45 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 29 | O94906 | 941 | PRP6_HUMAN Pre-mRNA-processing factor 6 OS=Ho... | 63 | 0.57 | 36.6 | 30 | 46 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0071001; C:U4/U6 snRNP; IDA:BHF-UCL.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:BHF-UCL.::GO:0005682; C:U5 snRNP; IDA:BHF-UCL. | | | | | | | | | | GO:0050681; F:androgen receptor binding; IPI:MGI.::GO:0043021; F:ribonucleoprotein complex binding; IDA:BHF-UCL.::GO:0003713; F:transcription coactivator activity; IGI:MGI. | | | | | | | | | | GO:0000244; P:assembly of spliceosomal tri-snRNP; IMP:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0000245; P:spliceosomal complex assembly; NAS:UniProtKB. | 30 | Q91YR7 | 941 | PRP6_MOUSE Pre-mRNA-processing factor 6 OS=Mu... | 63 | 0.62 | 36.2 | 30 | 46 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro. | 31 | Q03776 | 544 | PRP42_YEAST U1 small nuclear ribonucleoprotei... | 103 | 0.63 | 36.2 | 31 | 46 | GO:0005685; C:U1 snRNP; IDA:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD. | | | | | | | | | | GO:0003723; F:RNA binding; IDA:SGD. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD. |