FGC: Single Locus Summary

UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YDR443C

Length:

1420

Number of sequences:

5887

Description:

YDR443C SSN2 SGDID:S000002851, Chr IV from 1349938-1345676, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; required for stable association of Srb10p-Srb11p kinase; essential for transcriptional regulation"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
1	P38931	1420	SSN2_YEAST Mediator of RNA polymerase II tran...	1420	0	2927	100	100	GO:0016021; C:integral to membrane; IEA:InterPro.::GO:0016592; C:mediator complex; IDA:SGD.
									GO:0001105; F:RNA polymerase II transcription coactivator activity; IDA:SGD.::GO:0001135; F:RNA polymerase II transcription factor recruiting transcription factor activity; IMP:SGD.
									GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0000435; P:positive regulation of transcription from RNA polymerase II promoter by galactose; IMP:SGD.
2	Q6FNM7	1345	SSN2_CANGA Mediator of RNA polymerase II tran...	1434	0	1311	50	66	GO:0016021; C:integral to membrane; IEA:InterPro.::GO:0016592; C:mediator complex; IEA:InterPro.
									GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.

3	Q756F6	1357	SSN2_ASHGO Mediator of RNA polymerase II tran...	1427	0	1125	44	63	GO:0016021; C:integral to membrane; IEA:InterPro.::GO:0016592; C:mediator complex; IEA:InterPro.
									GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.

4	Q6CWU8	1387	SSN2_KLULA Mediator of RNA polymerase II tran...	1432	0	1015	41	61	GO:0016021; C:integral to membrane; IEA:InterPro.::GO:0016592; C:mediator complex; IEA:InterPro.
									GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.

5	Q6BZF6	1774	SSN2_DEBHA Mediator of RNA polymerase II tran...	144	0.046	42	24	43	GO:0016021; C:integral to membrane; IEA:InterPro.::GO:0016592; C:mediator complex; IEA:InterPro.
									GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.

6	A3LN53	1660	SSN2_PICST Mediator of RNA polymerase II tran...	140	0.002	46.6	28	43	GO:0016592; C:mediator complex; IEA:InterPro.
									GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.

7	Q5ALX5	1665	SSN2_CANAL Mediator of RNA polymerase II tran...	193	2.7	36.2	28	41	GO:0016021; C:integral to membrane; IEA:InterPro.::GO:0016592; C:mediator complex; IEA:InterPro.
									GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
									GO:0030447; P:filamentous growth; IMP:CGD.
8	Q6C9Q9	1324	SSN2_YARLI Mediator of RNA polymerase II tran...	358	1e-16	90.1	24	39	GO:0016592; C:mediator complex; IEA:InterPro.
									GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.

9	Q0U6W8	1375	SSN2_PHANO Mediator of RNA polymerase II tran...	381	0.0000000008	67.4	22	41	GO:0016592; C:mediator complex; IEA:InterPro.
									GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.

10	Q49X74	519	RNY_STAS1 Ribonuclease Y OS=DSM 20229). GN=rn...	150	4	35.4	23	49	GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
									GO:0008663; F:2',3'-cyclic-nucleotide 2'-phosphodiesterase activity; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.

records

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Total records:

1 - 10

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