rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
571 | E7QH16 | 203 | YRA2_YEASZ RNA annealing protein YRA2 OS=Sacc... | 69 | 0.52 | 35.4 | 29 | 45 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0051028; P:mRNA transport; IEA:UniProtKB-KW. | 572 | E7LWL0 | 203 | YRA2_YEASV RNA annealing protein YRA2 OS=Sacc... | 69 | 0.52 | 35.4 | 29 | 45 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0051028; P:mRNA transport; IEA:UniProtKB-KW. | 573 | P36036 | 203 | YRA2_YEAST RNA annealing protein YRA2 OS=Sacc... | 69 | 0.52 | 35.4 | 29 | 45 | GO:0005634; C:nucleus; IDA:SGD. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:SGD. | | | | | | | | | | GO:0016973; P:poly(A)+ mRNA export from nucleus; IGI:SGD. | 574 | E7Q5V8 | 203 | YRA2_YEASB RNA annealing protein YRA2 OS=Sacc... | 69 | 0.52 | 35.4 | 29 | 45 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0051028; P:mRNA transport; IEA:UniProtKB-KW. | 575 | E7KEM9 | 203 | YRA2_YEASA RNA annealing protein YRA2 OS=Sacc... | 69 | 0.52 | 35.4 | 29 | 45 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0051028; P:mRNA transport; IEA:UniProtKB-KW. | 576 | B5VLV2 | 203 | YRA2_YEAS6 RNA annealing protein YRA2 OS=Sacc... | 69 | 0.52 | 35.4 | 29 | 45 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0051028; P:mRNA transport; IEA:UniProtKB-KW. | 577 | C7GIZ9 | 203 | YRA2_YEAS2 RNA annealing protein YRA2 OS=Sacc... | 69 | 0.52 | 35.4 | 29 | 45 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0051028; P:mRNA transport; IEA:UniProtKB-KW. | 578 | B3LQP5 | 203 | YRA2_YEAS1 RNA annealing protein YRA2 OS=Sacc... | 69 | 0.52 | 35.4 | 29 | 45 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0051028; P:mRNA transport; IEA:UniProtKB-KW. | 579 | B2GV05 | 815 | RBM5_RAT RNA-binding protein 5 OS=Rattus norv... | 101 | 0.52 | 36.2 | 28 | 44 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0043065; P:positive regulation of apoptotic process; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB. | 580 | A7A075 | 203 | YRA2_YEAS7 RNA annealing protein YRA2 OS=Sacc... | 69 | 0.52 | 35.4 | 29 | 45 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0051028; P:mRNA transport; IEA:UniProtKB-KW. | 581 | B0BNE4 | 269 | EPAB2_RAT Embryonic polyadenylate-binding pro... | 63 | 0.54 | 35.8 | 38 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 582 | A5A6H4 | 320 | ROA1_PANTR Heterogeneous nuclear ribonucleopr... | 82 | 0.56 | 35.8 | 27 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 583 | P49312 | 320 | ROA1_MOUSE Heterogeneous nuclear ribonucleopr... | 82 | 0.56 | 35.8 | 27 | 49 | GO:0005737; C:cytoplasm; ISS:HGNC.::GO:0005654; C:nucleoplasm; ISS:HGNC.::GO:0005681; C:spliceosomal complex; ISS:HGNC. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; ISS:HGNC. | | | | | | | | | | GO:0000380; P:alternative nuclear mRNA splicing, via spliceosome; IDA:MGI.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0051168; P:nuclear export; ISS:HGNC.::GO:0051170; P:nuclear import; ISS:HGNC. | 584 | P09867 | 320 | ROA1_BOVIN Heterogeneous nuclear ribonucleopr... | 82 | 0.56 | 35.8 | 27 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0051028; P:mRNA transport; IEA:UniProtKB-KW. | 585 | P09405 | 707 | NUCL_MOUSE Nucleolin OS=Mus musculus (Mouse).... | 168 | 0.56 | 36.2 | 23 | 38 | GO:0005730; C:nucleolus; IDA:MGI.::GO:0005654; C:nucleoplasm; IDA:MGI.::GO:0030529; C:ribonucleoprotein complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB.::GO:0042162; F:telomeric DNA binding; ISS:UniProtKB. | | | | | | | | | | | 586 | Q1RMU5 | 815 | RBM5_BOVIN RNA-binding protein 5 OS=Bos tauru... | 101 | 0.56 | 36.2 | 28 | 44 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0043065; P:positive regulation of apoptotic process; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB. | 587 | Q93008 | 2570 | USP9X_HUMAN Probable ubiquitin carboxyl-termi... | 91 | 0.58 | 36.2 | 26 | 43 | GO:0005737; C:cytoplasm; IDA:UniProtKB. | | | | | | | | | | GO:0070410; F:co-SMAD binding; IPI:BHF-UCL.::GO:0004197; F:cysteine-type endopeptidase activity; TAS:ProtInc.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro. | | | | | | | | | | GO:0030509; P:BMP signaling pathway; IDA:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007292; P:female gamete generation; TAS:ProtInc.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0016579; P:protein deubiquitination; IDA:UniProtKB.::GO:0007179; P:transforming growth factor beta receptor signaling pathway; IMP:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. | 588 | P08621 | 437 | RU17_HUMAN U1 small nuclear ribonucleoprotein... | 65 | 0.59 | 35.8 | 29 | 45 | GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005681; C:spliceosomal complex; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IMP:UniProtKB. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0043484; P:regulation of RNA splicing; IMP:UniProtKB. | 589 | Q92904 | 295 | DAZL_HUMAN Deleted in azoospermia-like OS=Hom... | 75 | 0.6 | 35.8 | 29 | 45 | GO:0005737; C:cytoplasm; TAS:ProtInc.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; TAS:ProtInc.::GO:0008494; F:translation activator activity; IDA:UniProtKB. | | | | | | | | | | GO:0007281; P:germ cell development; TAS:ProtInc.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0045948; P:positive regulation of translational initiation; IDA:UniProtKB.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW. | 590 | Q8H1S6 | 229 | RU2B2_ARATH U2 small nuclear ribonucleoprotei... | 75 | 0.6 | 35.4 | 27 | 52 | GO:0015030; C:Cajal body; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0005686; C:U2 snRNP; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0017069; F:snRNA binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro. | 591 | D2HS90 | 869 | STPAP_AILME Speckle targeted PIP5K1A-regulate... | 74 | 0.61 | 36.2 | 35 | 45 | GO:0016607; C:nuclear speck; ISS:UniProtKB.::GO:0005730; C:nucleolus; ISS:UniProtKB. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0004652; F:polynucleotide adenylyltransferase activity; ISS:UniProtKB.::GO:0050265; F:RNA uridylyltransferase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006379; P:mRNA cleavage; ISS:UniProtKB.::GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB.::GO:0016180; P:snRNA processing; ISS:UniProtKB. | 592 | Q9GRW7 | 697 | NONA_DROVI Protein no-on-transient A OS=Droso... | 69 | 0.61 | 36.2 | 32 | 52 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0050896; P:response to stimulus; IEA:UniProtKB-KW.::GO:0007601; P:visual perception; IEA:UniProtKB-KW. | 593 | O08583 | 255 | THOC4_MOUSE THO complex subunit 4 OS=Mus musc... | 83 | 0.62 | 35.4 | 25 | 48 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:MGI.::GO:0003697; F:single-stranded DNA binding; IDA:MGI. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 594 | Q95192 | 295 | DAZL_MACFA Deleted in azoospermia-like OS=Mac... | 75 | 0.63 | 35.4 | 29 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW. | 595 | Q62376 | 448 | RU17_MOUSE U1 small nuclear ribonucleoprotein... | 65 | 0.66 | 35.8 | 29 | 45 | GO:0005681; C:spliceosomal complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB. | 596 | Q3T0I4 | 257 | THOC4_BOVIN THO complex subunit 4 OS=Bos taur... | 83 | 0.7 | 35.4 | 25 | 48 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 597 | Q6Z1C0 | 572 | NUCL1_ORYSJ Nucleolin 1 OS=Oryza sativa subsp... | 103 | 0.72 | 35.8 | 23 | 46 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | | 598 | Q91579 | 462 | CEL3A_XENLA CUGBP Elav-like family member 3-A... | 62 | 4.5 | 33.1 | 31 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB. | 599 | C8ZBW6 | 203 | YRA2_YEAS8 RNA annealing protein YRA2 OS=(Bak... | 71 | 7.1 | 32 | 31 | 44 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0051028; P:mRNA transport; IEA:UniProtKB-KW. | 600 | O60176 | 473 | YG41_SCHPO Uncharacterized RNA-binding protei... | 77 | 0.73 | 35.8 | 31 | 48 | GO:0000932; C:cytoplasmic mRNA processing body; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0071004; C:U2-type prespliceosome; ISS:PomBase. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:PomBase.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0070935; P:3'-UTR-mediated mRNA stabilization; ISS:PomBase. | 601 | P25299 | 296 | RNA15_YEAST mRNA 3'-end-processing protein RN... | 75 | 0.73 | 35.4 | 25 | 53 | GO:0005849; C:mRNA cleavage factor complex; IPI:SGD. | | | | | | | | | | GO:0003729; F:mRNA binding; IDA:SGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0046982; F:protein heterodimerization activity; IPI:SGD. | | | | | | | | | | GO:0006379; P:mRNA cleavage; IDA:SGD.::GO:0006378; P:mRNA polyadenylation; IDA:SGD. |