Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR412W
Length:
235
Number of sequences:
5887
Description:
YDR412W RRP17 SGDID:S000002820, Chr IV from 1294693-1295400, Genome Release 64-1-1, Verified ORF, "Component of the pre-60S pre-ribosomal particle; required for cell viability under standard (aerobic) conditions but not under anaerobic conditions; exonuclease required for 5′ end processing of pre-60S ribosomal RNA"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q04031    235   RRP17_YEAST Ribosomal RNA-processing protein ...2351e-168     471     100     100GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IMP:SGD.
2O14012    203   RRP17_SCHPO Ribosomal RNA-processing protein ...890.00000000001     64.7     43     69GO:0005954; C:calcium- and calmodulin-dependent protein kinase complex; TAS:UniProtKB.::GO:0005737; C:cytoplasm; ISS:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.
GO:0004527; F:exonuclease activity; ISS:PomBase.
GO:0000967; P:rRNA 5'-end processing; ISS:PomBase.::GO:0006364; P:rRNA processing; ISS:PomBase.
3Q640V3    216   NOL12_XENTR Nucleolar protein 12 OS=Xenopus t...870.00000003     55.8     47     66GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
4Q2KIV0    213   NOL12_BOVIN Nucleolar protein 12 OS=Bos tauru...490.00004     46.6     53     82GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
5Q9UGY1    213   NOL12_HUMAN Nucleolar protein 12 OS=Homo sapi...490.00006     46.2     53     82GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
6Q7ZWE7    228   NOL12_DANRE Nucleolar protein 12 OS=Danio rer...820.00007     46.2     37     65GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
7Q5RD68    213   NOL12_PONAB Nucleolar protein 12 OS=Pongo abe...490.00008     45.8     53     82GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
8Q0IH29    220   NOL12_XENLA Nucleolar protein 12 OS=Xenopus l...320.00009     45.8     66     81GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
9Q8BG17    217   NOL12_MOUSE Nucleolar protein 12 OS=Mus muscu...490.0004     44.3     51     80GO:0005730; C:nucleolus; IDA:MGI.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
10Q5D1Z3    216   NOL12_RAT Nucleolar protein 12 OS=Rattus norv...490.0004     43.9     51     80GO:0005730; C:nucleolus; IDA:MGI.
GO:0019843; F:rRNA binding; IDA:MGI.
11P08161    803   VE94_NPVAC Early 94 kDa protein OS=Autographa...950.033     38.9     32     47
12Q2GZN9    1255   NST1_CHAGB Stress response protein NST1 OS=63...580.43     35.4     38     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006950; P:response to stress; IEA:UniProtKB-KW.
13P29118    402   ALP_CEPAC Alkaline proteinase OS=Cephalospori...1280.43     35     29     45
GO:0042802; F:identical protein binding; IEA:InterPro.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0043086; P:negative regulation of catalytic activity; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
14B2THZ1    202   3MGH_CLOBB Putative 3-methyladenine DNA glyco...881.7     32.7     28     44
GO:0003905; F:alkylbase DNA N-glycosylase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006284; P:base-excision repair; IEA:InterPro.
15Q47LM6    169   RS9_THEFY 30S ribosomal protein S9 OS=Thermob...791.7     32.7     25     47GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
16Q0UJJ7    1202   NST1_PHANO Stress response protein NST1 OS=(G...582.3     33.1     34     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006950; P:response to stress; IEA:UniProtKB-KW.
17A0QSL7    201   RS4_MYCS2 30S ribosomal protein S4 OS=Mycobac...842.9     32     30     49GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
18A6RW62    1168   NST1_BOTFB Stress response protein nst1 OS=ci...413.3     32.7     46     68GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006950; P:response to stress; IEA:UniProtKB-KW.
19A7EMM3    1171   NST1_SCLS1 Stress response protein nst1 OS=mo...413.5     32.7     46     68GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006950; P:response to stress; IEA:UniProtKB-KW.
20A2R7P5    1201   NST1_ASPNC Stress response protein nst1 OS=As...744.3     32.3     34     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006950; P:response to stress; IEA:UniProtKB-KW.
21Q924S5    950   LONM_RAT Lon protease homolog, mitochondrial ...654.4     32.3     37     62GO:0042645; C:mitochondrial nucleoid; IBA:RefGenome.
GO:0005524; F:ATP binding; IBA:RefGenome.::GO:0004176; F:ATP-dependent peptidase activity; IDA:RGD.::GO:0070361; F:mitochondrial light strand promoter anti-sense binding; IBA:RefGenome.::GO:0004252; F:serine-type endopeptidase activity; IBA:RefGenome.::GO:0003697; F:single-stranded DNA binding; IBA:RefGenome.::GO:0003727; F:single-stranded RNA binding; IBA:RefGenome.
GO:0007568; P:aging; IEP:RGD.::GO:0043623; P:cellular protein complex assembly; IMP:RGD.::GO:0034599; P:cellular response to oxidative stress; IBA:RefGenome.::GO:0006515; P:misfolded or incompletely synthesized protein catabolic process; IBA:RefGenome.::GO:0007005; P:mitochondrion organization; IEP:RGD.::GO:0070407; P:oxidation-dependent protein catabolic process; IBA:RefGenome.::GO:0051260; P:protein homooligomerization; IBA:RefGenome.::GO:0010044; P:response to aluminum ion; IEP:RGD.::GO:0009725; P:response to hormone stimulus; IEP:RGD.::GO:0001666; P:response to hypoxia; IEP:RGD.
22Q8CGK3    949   LONM_MOUSE Lon protease homolog, mitochondria...654.5     32.3     37     62GO:0042645; C:mitochondrial nucleoid; IBA:RefGenome.
GO:0005524; F:ATP binding; IBA:RefGenome.::GO:0004176; F:ATP-dependent peptidase activity; IDA:MGI.::GO:0070361; F:mitochondrial light strand promoter anti-sense binding; IDA:MGI.::GO:0004252; F:serine-type endopeptidase activity; IBA:RefGenome.::GO:0003697; F:single-stranded DNA binding; IDA:MGI.::GO:0003727; F:single-stranded RNA binding; IBA:RefGenome.
GO:0034599; P:cellular response to oxidative stress; IBA:RefGenome.::GO:0051131; P:chaperone-mediated protein complex assembly; IBA:RefGenome.::GO:0006515; P:misfolded or incompletely synthesized protein catabolic process; IBA:RefGenome.::GO:0007005; P:mitochondrion organization; IBA:RefGenome.::GO:0070407; P:oxidation-dependent protein catabolic process; IBA:RefGenome.::GO:0051260; P:protein homooligomerization; IBA:RefGenome.::GO:0001666; P:response to hypoxia; IBA:RefGenome.
23P22002    2169   CAC1C_RAT Voltage-dependent L-type calcium ch...674.5     32.3     31     54GO:0005624; C:membrane fraction; IDA:RGD.::GO:0043025; C:neuronal cell body; IDA:UniProtKB.::GO:0014069; C:postsynaptic density; IDA:UniProtKB.::GO:0030315; C:T-tubule; IDA:RGD.::GO:0005891; C:voltage-gated calcium channel complex; IDA:RGD.
GO:0019904; F:protein domain specific binding; IPI:RGD.::GO:0051721; F:protein phosphatase 2A binding; IPI:RGD.::GO:0005245; F:voltage-gated calcium channel activity; IDA:RGD.
24P36776    959   LONM_HUMAN Lon protease homolog, mitochondria...615.2     32     41     62GO:0042645; C:mitochondrial nucleoid; IDA:BHF-UCL.
GO:0043531; F:ADP binding; IDA:UniProtKB.::GO:0005524; F:ATP binding; IDA:UniProtKB.::GO:0004176; F:ATP-dependent peptidase activity; IDA:UniProtKB.::GO:0070182; F:DNA polymerase binding; IPI:UniProtKB.::GO:0051880; F:G-quadruplex DNA binding; IDA:UniProtKB.::GO:0070362; F:mitochondrial heavy strand promoter anti-sense binding; IDA:UniProtKB.::GO:0070361; F:mitochondrial light strand promoter anti-sense binding; IDA:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.::GO:0004252; F:serine-type endopeptidase activity; IBA:RefGenome.::GO:0003697; F:single-stranded DNA binding; IBA:RefGenome.::GO:0003727; F:single-stranded RNA binding; IDA:UniProtKB.
GO:0034599; P:cellular response to oxidative stress; IDA:UniProtKB.::GO:0006515; P:misfolded or incompletely synthesized protein catabolic process; IBA:RefGenome.::GO:0032042; P:mitochondrial DNA metabolic process; NAS:UniProtKB.::GO:0070407; P:oxidation-dependent protein catabolic process; IMP:UniProtKB.::GO:0051260; P:protein homooligomerization; IDA:UniProtKB.::GO:0001666; P:response to hypoxia; IEP:UniProtKB.
25Q01815    2139   CAC1C_MOUSE Voltage-dependent L-type calcium ...675.2     32     31     54GO:0002095; C:caveolar macromolecular signaling complex; IDA:MGI.::GO:0043198; C:dendritic shaft; IDA:MGI.::GO:0005624; C:membrane fraction; IDA:MGI.::GO:0043025; C:neuronal cell body; IDA:MGI.::GO:0030315; C:T-tubule; TAS:MGI.::GO:0005891; C:voltage-gated calcium channel complex; TAS:MGI.
GO:0005515; F:protein binding; IPI:MGI.::GO:0005245; F:voltage-gated calcium channel activity; IDA:MGI.
GO:0007628; P:adult walking behavior; IGI:MGI.::GO:0017156; P:calcium ion-dependent exocytosis; IMP:MGI.::GO:0006874; P:cellular calcium ion homeostasis; IMP:MGI.::GO:0042593; P:glucose homeostasis; IMP:MGI.::GO:0030252; P:growth hormone secretion; IDA:MGI.::GO:0030073; P:insulin secretion; IMP:MGI.::GO:0008217; P:regulation of blood pressure; IMP:MGI.::GO:0046620; P:regulation of organ growth; IMP:MGI.::GO:0019229; P:regulation of vasoconstriction; IMP:MGI.::GO:0060083; P:smooth muscle contraction involved in micturition; IMP:MGI.::GO:0007268; P:synaptic transmission; IMP:MGI.::GO:0008542; P:visual learning; IMP:MGI.
26Q59HJ6    961   LONM_BOVIN Lon protease homolog, mitochondria...615.4     32     41     62GO:0042645; C:mitochondrial nucleoid; ISS:RefGenome.
GO:0005524; F:ATP binding; ISS:RefGenome.::GO:0004176; F:ATP-dependent peptidase activity; ISS:RefGenome.::GO:0070361; F:mitochondrial light strand promoter anti-sense binding; ISS:RefGenome.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004252; F:serine-type endopeptidase activity; ISS:RefGenome.::GO:0003697; F:single-stranded DNA binding; ISS:RefGenome.::GO:0003727; F:single-stranded RNA binding; ISS:RefGenome.
GO:0034599; P:cellular response to oxidative stress; ISS:RefGenome.::GO:0006515; P:misfolded or incompletely synthesized protein catabolic process; ISS:RefGenome.::GO:0007005; P:mitochondrion organization; ISS:RefGenome.::GO:0070407; P:oxidation-dependent protein catabolic process; ISS:RefGenome.::GO:0051260; P:protein homooligomerization; ISS:RefGenome.::GO:0001666; P:response to hypoxia; ISS:RefGenome.
27B2UXQ2    202   3MGH_CLOBA Putative 3-methyladenine DNA glyco...496.5     31.2     31     45
GO:0003905; F:alkylbase DNA N-glycosylase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006284; P:base-excision repair; IEA:InterPro.
28O73700    2190   CAC1D_CHICK Voltage-dependent L-type calcium ...538.9     31.2     36     62GO:0005891; C:voltage-gated calcium channel complex; IEA:InterPro.
29Q80TI1    1356   PKHH1_MOUSE Pleckstrin homology domain-contai...679.4     31.2     33     51GO:0005856; C:cytoskeleton; IEA:InterPro.
GO:0005543; F:phospholipid binding; IEA:InterPro.
30Q03212    550   EAR1_YEAST Protein EAR1 OS=Saccharomyces cere...869.7     31.2     28     43GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005774; C:vacuolar membrane; IEA:UniProtKB-SubCell.
GO:0043328; P:protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway; IGI:SGD.
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