Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR398W
Length:
643
Number of sequences:
5887
Description:
YDR398W UTP5 SGDID:S000002806, Chr IV from 1267471-1269402, Genome Release 64-1-1, Verified ORF, "Subunit of U3-containing Small Subunit (SSU) processome complex involved in production of 18S rRNA and assembly of small ribosomal subunit"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31O45040    340   GBB1_HOMAM Guanine nucleotide-binding protein...900.34     37.4     29     46
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
32Q8YRI1    1526   YY46_NOSS1 Uncharacterized WD repeat-containi...1599.2     33.1     24     44
33P23232    341   GBB_LOLFO Guanine nucleotide-binding protein ...900.38     37.4     27     49
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
34Q8NI36    951   WDR36_HUMAN WD repeat-containing protein 36 O...1920.45     37.4     22     47GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0050896; P:response to stimulus; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:InterPro.::GO:0007601; P:visual perception; IEA:UniProtKB-KW.
35P90648    732   MHCKB_DICDI Myosin heavy chain kinase B OS=Di...760.46     37.4     29     54GO:0005826; C:actomyosin contractile ring; IDA:dictyBase.
GO:0005524; F:ATP binding; IC:dictyBase.::GO:0016905; F:myosin heavy chain kinase activity; IDA:dictyBase.::GO:0045159; F:myosin II binding; IPI:dictyBase.
GO:0000910; P:cytokinesis; IMP:dictyBase.::GO:0031037; P:myosin II filament disassembly; IMP:dictyBase.::GO:0018107; P:peptidyl-threonine phosphorylation; IDA:dictyBase.::GO:0046777; P:protein autophosphorylation; IDA:dictyBase.
36Q09715    614   TUP11_SCHPO Transcriptional repressor tup11 O...870.46     37.4     28     46GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0042393; F:histone binding; IDA:PomBase.::GO:0003714; F:transcription corepressor activity; IGI:PomBase.
GO:0033554; P:cellular response to stress; IEP:PomBase.::GO:0006342; P:chromatin silencing; TAS:PomBase.::GO:0045014; P:negative regulation of transcription by glucose; IMP:PomBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IEP:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
37Q8NHY2    731   RFWD2_HUMAN E3 ubiquitin-protein ligase RFWD2...2540.52     37.4     22     39GO:0005813; C:centrosome; IDA:HPA.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005925; C:focal adhesion; IDA:HPA.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006977; P:DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest; TAS:Reactome.
38Q9D994    303   WDR38_MOUSE WD repeat-containing protein 38 O...980.53     36.6     28     47
39O75529    589   TAF5L_HUMAN TAF5-like RNA polymerase II p300/...1780.54     37     23     43GO:0030914; C:STAGA complex; IDA:UniProtKB.::GO:0033276; C:transcription factor TFTC complex; IDA:UniProtKB.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.::GO:0003713; F:transcription coactivator activity; IDA:UniProtKB.
GO:0043966; P:histone H3 acetylation; IDA:UniProtKB.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc.
40P20053    465   PRP4_YEAST U4/U6 small nuclear ribonucleoprot...460.56     37     37     52GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IPI:SGD.
41Q91WQ5    589   TAF5L_MOUSE TAF5-like RNA polymerase II p300/...1780.57     37     23     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
42Q9HAV0    340   GBB4_HUMAN Guanine nucleotide-binding protein...900.64     36.6     29     47GO:0005886; C:plasma membrane; TAS:Reactome.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0071377; P:cellular response to glucagon stimulus; TAS:Reactome.::GO:0006112; P:energy reserve metabolic process; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.
43Q6CJ50    705   MDV1_KLULA Mitochondrial division protein 1 O...876.8     33.5     25     49GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
44Q9R1A8    733   RFWD2_MOUSE E3 ubiquitin-protein ligase RFWD2...2541     36.2     22     39GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:BHF-UCL.::GO:0008270; F:zinc ion binding; IEA:InterPro.
45Q9NDC9    404   LIS1_CAEEL Lissencephaly-1 homolog OS=Caenorh...1671.1     35.8     27     43GO:0005818; C:aster; IDA:WormBase.::GO:0005938; C:cell cortex; IDA:WormBase.::GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005874; C:microtubule; IDA:WormBase.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IDA:WormBase.
GO:0005515; F:protein binding; IPI:WormBase.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0051026; P:chiasma assembly; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0043652; P:engulfment of apoptotic cell; IMP:WormBase.::GO:0000132; P:establishment of mitotic spindle orientation; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0007018; P:microtubule-based movement; IMP:WormBase.::GO:0007100; P:mitotic centrosome separation; IMP:WormBase.::GO:0007052; P:mitotic spindle organization; IMP:WormBase.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0035046; P:pronuclear migration; IMP:WormBase.::GO:0051225; P:spindle assembly; IMP:WormBase.::GO:0051932; P:synaptic transmission, GABAergic; IMP:WormBase.::GO:0048489; P:synaptic vesicle transport; IMP:WormBase.::GO:0040025; P:vulval development; IMP:WormBase.
46Q5ZMA2    505   PRP19_CHICK Pre-mRNA-processing factor 19 OS=...481.2     35.8     27     60GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
47Q8YTC2    1258   Y2800_NOSS1 Uncharacterized WD repeat-contain...661.2     36.2     26     52
GO:0043531; F:ADP binding; IEA:InterPro.
GO:0006952; P:defense response; IEA:InterPro.
48P91341    910   PWP2_CAEEL Periodic tryptophan protein 2 homo...1261.2     36.2     27     44
GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.
49O76734    579   TUP1_DICDI General transcriptional corepresso...591.2     35.8     31     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
50Q15269    919   PWP2_HUMAN Periodic tryptophan protein 2 homo...1931.5     35.8     21     43GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
GO:0004871; F:signal transducer activity; TAS:ProtInc.
51Q08E38    504   PRP19_BOVIN Pre-mRNA-processing factor 19 OS=...481.5     35.4     27     60GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
52Q9JMJ4    504   PRP19_RAT Pre-mRNA-processing factor 19 OS=Ra...481.5     35.4     27     60GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
53Q99KP6    504   PRP19_MOUSE Pre-mRNA-processing factor 19 OS=...481.5     35.4     27     60GO:0005811; C:lipid particle; IDA:MGI.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0001833; P:inner cell mass cell proliferation; IMP:MGI.::GO:0008610; P:lipid biosynthetic process; IDA:MGI.::GO:0045665; P:negative regulation of neuron differentiation; IDA:MGI.::GO:0048711; P:positive regulation of astrocyte differentiation; IDA:MGI.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; IMP:MGI.
54Q9UMS4    504   PRP19_HUMAN Pre-mRNA-processing factor 19 OS=...481.5     35.4     27     60GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IDA:BHF-UCL.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IPI:BHF-UCL.::GO:0034450; F:ubiquitin-ubiquitin ligase activity; IDA:MGI.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0000209; P:protein polyubiquitination; IDA:MGI.::GO:0000245; P:spliceosomal complex assembly; IMP:BHF-UCL.
55Q5RD06    451   POC1B_PONAB POC1 centriolar protein homolog B...2171.6     35.4     22     39GO:0005814; C:centriole; ISS:UniProtKB.::GO:0005932; C:microtubule basal body; ISS:UniProtKB.
GO:0042384; P:cilium assembly; ISS:UniProtKB.
56Q4V8C4    328   WDR5B_RAT WD repeat-containing protein 5B OS=...2711.6     35     21     36
57Q9P7I3    651   MDV1_SCHPO Mitochondrial division protein 1 O...881.7     35.4     27     55GO:0030015; C:CCR4-NOT core complex; NAS:PomBase.::GO:0005741; C:mitochondrial outer membrane; ISS:PomBase.
GO:0051020; F:GTPase binding; NAS:PomBase.
GO:0000266; P:mitochondrial fission; ISS:PomBase.::GO:0000002; P:mitochondrial genome maintenance; ISS:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; ISS:PomBase.::GO:0006354; P:transcription elongation, DNA-dependent; IC:PomBase.
58Q8N0X2    631   SPG16_HUMAN Sperm-associated antigen 16 prote...1102.7     34.7     20     48GO:0035085; C:cilium axoneme; ISS:UniProtKB.::GO:0035086; C:flagellar axoneme; IEA:UniProtKB-SubCell.
GO:0042384; P:cilium assembly; ISS:UniProtKB.
59B0W517    425   WDR12_CULQU Ribosome biogenesis protein WDR12...1392.7     34.7     21     47GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
60Q6GMD2    305   WDR61_XENLA WD repeat-containing protein 61 O...482.8     34.3     29     54GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
61Q5RFQ3    918   PWP2_PONAB Periodic tryptophan protein 2 homo...1932.8     34.7     21     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
records
Previous ‹‹ ›› Next Total records: 88 31 - 60
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::