Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR394W
Length:
428
Number of sequences:
5887
Description:
YDR394W RPT3 SGDID:S000002802, Chr IV from 1261681-1262967, Genome Release 64-1-1, Verified ORF, "One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation of ubiquitinated substrates; substrate of N-acetyltransferase B"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
631Q925I1    591   ATAD3_MOUSE ATPase family AAA domain-containi...1590.000005     52.4     28     45GO:0005743; C:mitochondrial inner membrane; IDA:MGI.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
632Q859W7    2392   YCF2_ANTFO Protein ycf2 OS=Anthoceros formosa...1790.00001     51.6     23     47GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
633Q3KRE0    591   ATAD3_RAT ATPase family AAA domain-containing...1510.00001     51.2     29     46
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
634A7YWC4    586   ATAD3_BOVIN ATPase family AAA domain-containi...1510.00001     50.8     28     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
635P60373    430   RFCL_NANEQ Replication factor C large subunit...870.00002     50.1     36     52
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
636P08973    2131   YCF2_SPIOL Protein ycf2 OS=Spinacia oleracea ...1920.00002     50.4     23     43GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
637A6H690    825   IQCAL_MOUSE IQ and AAA domain-containing prot...770.00003     50.4     36     53
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
638A1RWU6    413   RFCL_THEPD Replication factor C large subunit...1850.00004     49.3     30     46
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
639P61243    2259   YCF2_PHYPA Protein ycf2 OS=Physcomitrella pat...1450.00004     49.7     27     48GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
640Q6AXQ7    822   IQCAL_RAT IQ and AAA domain-containing protei...770.00005     49.3     36     56
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
641Q5UR45    196   YL572_MIMIV Putative AAA family ATPase L572 O...450.00006     47.4     47     64
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
642Q54YV4    956   LONM1_DICDI Lon protease homolog, mitochondri...2720.00006     48.9     24     43GO:0042645; C:mitochondrial nucleoid; IBA:RefGenome.
GO:0005524; F:ATP binding; IBA:RefGenome.::GO:0004176; F:ATP-dependent peptidase activity; IBA:RefGenome.::GO:0070361; F:mitochondrial light strand promoter anti-sense binding; IBA:RefGenome.::GO:0004252; F:serine-type endopeptidase activity; IBA:RefGenome.::GO:0003697; F:single-stranded DNA binding; IBA:RefGenome.::GO:0003727; F:single-stranded RNA binding; IBA:RefGenome.
GO:0034599; P:cellular response to oxidative stress; IBA:RefGenome.::GO:0006515; P:misfolded or incompletely synthesized protein catabolic process; IBA:RefGenome.::GO:0007005; P:mitochondrion organization; IBA:RefGenome.::GO:0070407; P:oxidation-dependent protein catabolic process; IBA:RefGenome.::GO:0051260; P:protein homooligomerization; IBA:RefGenome.::GO:0001666; P:response to hypoxia; IBA:RefGenome.
643C3NHF4    405   RFCL_SULIN Replication factor C large subunit...1650.00007     48.5     30     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
644Q4JAB1    437   RFCL_SULAC Replication factor C large subunit...1650.00008     48.1     28     44
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
645Q5T9A4    648   ATD3B_HUMAN ATPase family AAA domain-containi...1520.00009     48.5     30     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
646Q9YBS5    479   RFCL_AERPE Replication factor C large subunit...760.0001     48.1     37     54
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
647C4KHA7    405   RFCL_SULIK Replication factor C large subunit...1650.0001     47.8     29     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
648Q6BKJ4    1079   LONM_DEBHA Lon protease homolog, mitochondria...2170.0001     48.1     27     45GO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
649Q9UXF6    405   RFCL_SULSO Replication factor C large subunit...1890.0001     47.4     28     44
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
650A8AC24    476   RFCL_IGNH4 Replication factor C large subunit...2730.0001     47.8     25     42GO:0005663; C:DNA replication factor C complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
651Q8TZC5    510   RFCL_METKA Replication factor C large subunit...1000.0002     47.4     32     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
652Q11QT1    813   LON_CYTH3 Lon protease OS=Cytophaga hutchinso...2450.0002     47.8     26     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
653C3NE95    405   RFCL_SULIY Replication factor C large subunit...1650.0002     47.4     29     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
654C3MQ13    405   RFCL_SULIL Replication factor C large subunit...1650.0002     47.4     29     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
655C3MVD2    405   RFCL_SULIM Replication factor C large subunit...1650.0002     47     29     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
656C3N5N1    405   RFCL_SULIA Replication factor C large subunit...1650.0002     47     29     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
657A3MS27    421   RFCL_PYRCJ Replication factor C large subunit...830.0002     47     37     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
658Q9NVI7    634   ATD3A_HUMAN ATPase family AAA domain-containi...1280.0002     47     26     47GO:0005739; C:mitochondrion; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0016049; P:cell growth; IMP:UniProtKB.::GO:0043066; P:negative regulation of apoptotic process; IMP:UniProtKB.
659A3M072    1086   LONM_PICST Lon protease homolog, mitochondria...2170.0002     47.4     26     45GO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
660Q1IHV6    360   RUVB_KORVE Holliday junction ATP-dependent DN...680.0003     46.2     40     54
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
661B8CI18    441   HSLU_SHEPW ATP-dependent protease ATPase subu...1070.0003     46.6     30     54GO:0009376; C:HslUV protease complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0070011; F:peptidase activity, acting on L-amino acid peptides; IEA:InterPro.
GO:0006950; P:response to stress; IEA:UniProtKB-KW.
records
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