Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR392W
Length:
337
Number of sequences:
5887
Description:
YDR392W SPT3 SGDID:S000002800, Chr IV from 1258696-1259709, Genome Release 64-1-1, Verified ORF, "Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, interacts with Spt15p to activate transcription of some RNA polymerase II-dependent genes, also functions to inhibit transcription at some promoters"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P06844    337   SPT3_YEAST Protein SPT3 OS=Saccharomyces cere...3370     699     100     100GO:0000124; C:SAGA complex; IDA:SGD.::GO:0046695; C:SLIK (SAGA-like) complex; IDA:SGD.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003712; F:transcription cofactor activity; IDA:SGD.
GO:0030437; P:ascospore formation; TAS:SGD.::GO:0000747; P:conjugation with cellular fusion; TAS:SGD.::GO:0016573; P:histone acetylation; IDA:SGD.::GO:0001403; P:invasive growth in response to glucose limitation; IDA:SGD.::GO:0007124; P:pseudohyphal growth; IDA:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; IMP:SGD.
2O13472    328   SPT3_KLULA Protein SPT3 OS=1267 / NRRL Y-1140...3377e-157     449     73     83GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro.
3O14311    307   SPT3_SCHPO Protein spt3 OS=Schizosaccharomyce...3341e-93     288     47     64GO:0000785; C:chromatin; NAS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0000124; C:SAGA complex; IDA:PomBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003712; F:transcription cofactor activity; ISS:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0016573; P:histone acetylation; ISS:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:PomBase.::GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro.
4O75486    399   SUPT3_HUMAN Transcription initiation protein ...2492e-26     112     31     52GO:0030914; C:STAGA complex; IDA:UniProtKB.::GO:0033276; C:transcription factor TFTC complex; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003713; F:transcription coactivator activity; IDA:UniProtKB.
GO:0016578; P:histone deubiquitination; IDA:UniProtKB.::GO:0043966; P:histone H3 acetylation; IDA:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; NAS:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc.::GO:0006352; P:transcription initiation, DNA-dependent; NAS:UniProtKB.
5Q54CN8    106   TAF13_DICDI Transcription initiation factor T...890.0003     43.1     29     55GO:0005669; C:transcription factor TFIID complex; ISS:dictyBase.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; ISS:dictyBase.
6Q5R9W6    124   TAF13_PONAB Transcription initiation factor T...900.005     40     29     52
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro.
7P61216    124   TAF13_MOUSE Transcription initiation factor T...900.005     40     29     52
GO:0003677; F:DNA binding; IDA:MGI.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro.
8Q15543    124   TAF13_HUMAN Transcription initiation factor T...900.005     40     29     52GO:0005730; C:nucleolus; IDA:HPA.::GO:0005669; C:transcription factor TFIID complex; IDA:UniProtKB.
GO:0008022; F:protein C-terminus binding; IPI:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:UniProtKB.
GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IC:UniProtKB.::GO:0016032; P:viral reproduction; TAS:Reactome.
9Q148M7    124   TAF13_BOVIN Transcription initiation factor T...900.005     40     29     52
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro.
10B1KPS5    874   SYA_SHEWM Alanine--tRNA ligase OS=Shewanella ...844.3     33.1     33     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004813; F:alanine-tRNA ligase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
GO:0006419; P:alanyl-tRNA aminoacylation; IEA:InterPro.
records
Previous ‹‹ ›› Next Total records: 10 1 - 10
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::