Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR382W
Length:
110
Number of sequences:
5887
Description:
YDR382W RPP2B SGDID:S000002790, Chr IV from 1239492-1239824, Genome Release 64-1-1, Verified ORF, "Ribosomal protein P2 beta, a component of the ribosomal stalk, which is involved in the interaction between translational elongation factors and the ribosome; regulates the accumulation of P1 (Rpp1Ap and Rpp1Bp) in the cytoplasm"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61P0CL88    1127   XRN2_CRYNJ 5'-3' exoribonuclease 2 OS=ATCC MY...1023.6     30     28     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004534; F:5'-3' exoribonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006353; P:transcription termination, DNA-dependent; IEA:UniProtKB-KW.
62Q13615    1198   MTMR3_HUMAN Myotubularin-related protein 3 OS...713.6     30     35     44GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.::GO:0005624; C:membrane fraction; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:HPA.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004438; F:phosphatidylinositol-3-phosphatase activity; IDA:UniProtKB.::GO:0004722; F:protein serine/threonine phosphatase activity; IDA:UniProtKB.::GO:0004725; F:protein tyrosine phosphatase activity; IDA:UniProtKB.
GO:0046856; P:phosphatidylinositol dephosphorylation; IDA:UniProtKB.
63Q9Y9W9    111   RL12_AERPE 50S ribosomal protein L12P OS=1001...363.8     29.3     42     75GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006414; P:translational elongation; IEA:InterPro.
64Q93572    312   RLA0_CAEEL 60S acidic ribosomal protein P0 OS...114.5     29.6     100     100GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
65P02226    161   GLB7A_CHITH Globin CTT-VIIA OS=Chironomus thu...464.9     29.6     35     63GO:0005576; C:extracellular region; IEA:InterPro.::GO:0005833; C:hemoglobin complex; IEA:InterPro.
GO:0020037; F:heme binding; IEA:InterPro.::GO:0019825; F:oxygen binding; IEA:InterPro.::GO:0005344; F:oxygen transporter activity; IEA:UniProtKB-KW.
66P05317    312   RLA0_YEAST 60S acidic ribosomal protein P0 OS...115.7     29.6     100     100GO:0030686; C:90S preribosome; IDA:SGD.::GO:0022625; C:cytosolic large ribosomal subunit; TAS:SGD.
GO:0070180; F:LSU rRNA binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003735; F:structural constituent of ribosome; TAS:SGD.
GO:0002181; P:cytoplasmic translation; TAS:SGD.::GO:0000027; P:ribosomal large subunit assembly; IMP:SGD.::GO:0006414; P:translational elongation; IEA:InterPro.
67P50344    110   RLA1_DAVTA 60S acidic ribosomal protein P1 OS...115.9     28.9     100     100GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006414; P:translational elongation; IEA:InterPro.
68P05318    106   RLA1_YEAST 60S acidic ribosomal protein P1-al...116     28.9     100     100GO:0022625; C:cytosolic large ribosomal subunit; TAS:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003735; F:structural constituent of ribosome; TAS:SGD.
GO:0002181; P:cytoplasmic translation; TAS:SGD.::GO:0006414; P:translational elongation; IEA:InterPro.
69O04204    317   RLA01_ARATH 60S acidic ribosomal protein P0-1...536     29.3     49     57GO:0022626; C:cytosolic ribosome; IDA:TAIR.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006414; P:translational elongation; IEA:InterPro.
70P91913    111   RLA1_CAEEL 60S acidic ribosomal protein P1 OS...116.1     28.9     100     100GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0006414; P:translational elongation; IEA:InterPro.
71P0CL89    1130   XRN2_CRYNB 5'-3' exoribonuclease 2 OS=(Filoba...1026.8     29.3     28     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004534; F:5'-3' exoribonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006353; P:transcription termination, DNA-dependent; IEA:UniProtKB-KW.
72Q9HFQ7    106   RLA1_CANAL 60S acidic ribosomal protein P1-A ...117.7     28.5     100     100GO:0005840; C:ribosome; IDA:CGD.
GO:0003735; F:structural constituent of ribosome; IDA:CGD.
GO:0006414; P:translational elongation; IEA:InterPro.
73P13332    659   VG18_BPT4 Tail sheath protein Gp18 OS=Enterob...587.8     29.3     26     53GO:0019012; C:virion; IEA:UniProtKB-SubCell.
74P04114    4563   APOB_HUMAN Apolipoprotein B-100 OS=Homo sapie...628     29.3     34     55GO:0034360; C:chylomicron remnant; TAS:BHF-UCL.::GO:0030669; C:clathrin-coated endocytic vesicle membrane; TAS:Reactome.::GO:0005788; C:endoplasmic reticulum lumen; TAS:Reactome.::GO:0005789; C:endoplasmic reticulum membrane; TAS:Reactome.::GO:0031904; C:endosome lumen; TAS:Reactome.::GO:0010008; C:endosome membrane; TAS:Reactome.::GO:0034363; C:intermediate-density lipoprotein particle; IDA:BHF-UCL.::GO:0034362; C:low-density lipoprotein particle; IDA:BHF-UCL.::GO:0034359; C:mature chylomicron; IDA:BHF-UCL.::GO:0005792; C:microsome; TAS:ProtInc.::GO:0005886; C:plasma membrane; TAS:Reactome.::GO:0034361; C:very-low-density lipoprotein particle; IDA:BHF-UCL.
GO:0017127; F:cholesterol transporter activity; IMP:BHF-UCL.::GO:0019899; F:enzyme binding; IPI:BHF-UCL.::GO:0008201; F:heparin binding; IDA:BHF-UCL.::GO:0050750; F:low-density lipoprotein particle receptor binding; IMP:BHF-UCL.::GO:0005543; F:phospholipid binding; IDA:BHF-UCL.::GO:0046982; F:protein heterodimerization activity; IPI:BHF-UCL.
GO:0007596; P:blood coagulation; TAS:Reactome.::GO:0042632; P:cholesterol homeostasis; IMP:BHF-UCL.::GO:0008203; P:cholesterol metabolic process; IMP:BHF-UCL.::GO:0050900; P:leukocyte migration; TAS:Reactome.::GO:0034383; P:low-density lipoprotein particle clearance; IMP:BHF-UCL.::GO:0034374; P:low-density lipoprotein particle remodeling; IMP:BHF-UCL.::GO:0010886; P:positive regulation of cholesterol storage; IDA:BHF-UCL.::GO:0010744; P:positive regulation of macrophage derived foam cell differentiation; IDA:BHF-UCL.::GO:0006898; P:receptor-mediated endocytosis; TAS:Reactome.::GO:0009615; P:response to virus; IEP:UniProtKB.::GO:0034379; P:very-low-density lipoprotein particle assembly; IC:BHF-UCL.
records
Previous ‹‹ ›› Next Total records: 74 61 - 74
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::