Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR365W-B
Length:
1755
Number of sequences:
5887
Description:
YDR365W-B YDR365W-B SGDID:S000007401, Chr IV from 1206997-1208301,1208303-1212265, Genome Release 64-1-1, transposable_element_gene, "Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61Q12085    440   YG11A_YEAST Transposon Ty1-GR1 Gag polyprotei...4350     885     99     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
62P47099    440   YJ12A_YEAST Transposon Ty1-JR2 Gag polyprotei...4380     883     98     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
63P0CX69    440   YM14A_YEAST Transposon Ty1-MR2 Gag polyprotei...4380     879     97     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
64P0CX68    440   YL11A_YEAST Transposon Ty1-LR1 Gag polyprotei...4380     879     97     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
65P0CX67    440   YG13A_YEAST Transposon Ty1-GR3 Gag polyprotei...4380     879     97     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
66P0CX66    440   YE12A_YEAST Transposon Ty1-ER2 Gag polyprotei...4380     879     97     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
67P0CX65    440   YD14A_YEAST Transposon Ty1-DR5 Gag polyprotei...4380     879     97     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
68Q03856    440   YD11A_YEAST Transposon Ty1-DR1 Gag polyprotei...4350     879     98     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
69Q12441    440   YD12A_YEAST Transposon Ty1-DR3 Gag polyprotei...4380     877     97     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
70P0CX60    440   YP13A_YEAST Transposon Ty1-PR2 Gag polyprotei...4380     876     97     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
71P0CX59    440   YO12A_YEAST Transposon Ty1-OR Gag polyprotein...4380     876     97     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
72Q04706    440   YM11A_YEAST Transposon Ty1-ML1 Gag polyprotei...4380     876     97     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
73Q12217    440   YB12A_YEAST Transposon Ty1-BR Gag polyprotein...4380     875     97     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
74Q12470    440   YN12A_YEAST Transposon Ty1-NL2 Gag polyprotei...4380     865     96     97GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
75P0C2I4    478   YH11A_YEAST Transposon Ty1-H Gag polyprotein ...4760     855     89     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
76Q12391    440   YN11A_YEAST Transposon Ty1-NL1 Gag polyprotei...4350     762     86     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
77Q03964    440   YD17A_YEAST Transposon Ty1-DR2 Gag polyprotei...4350     699     79     86GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
78Q04215    440   YM13A_YEAST Transposon Ty1-MR1 Gag polyprotei...4350     697     79     85GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
79Q12266    440   YB11A_YEAST Transposon Ty1-BL Gag polyprotein...4350     693     79     85GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
80Q12439    438   YO21A_YEAST Transposon Ty2-OR1 Gag polyprotei...4352e-128     414     51     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
81Q12392    438   YD21A_YEAST Transposon Ty2-DR1 Gag polyprotei...4353e-127     411     51     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
82P25383    438   YC21A_YEAST Transposon Ty2-C Gag polyprotein ...4359e-126     407     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.
83Q99303    438   YD23A_YEAST Transposon Ty2-DR3 Gag polyprotei...4351e-125     407     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
84P0C2J6    438   YL22A_YEAST Transposon Ty2-LR2 Gag polyprotei...4352e-125     406     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
85Q12260    438   YB21A_YEAST Transposon Ty2-B Gag polyprotein ...4355e-125     405     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
86Q03483    438   YD22A_YEAST Transposon Ty2-DR2 Gag polyprotei...4358e-125     404     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
87P0C2J4    438   YL21A_YEAST Transposon Ty2-LR1 Gag polyprotei...4354e-124     402     50     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
88P0CX62    438   YG22A_YEAST Transposon Ty2-GR2 Gag polyprotei...4354e-124     402     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
89P0CX61    438   YF21A_YEAST Transposon Ty2-F Gag polyprotein ...4354e-124     402     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
90Q12293    438   YO22A_YEAST Transposon Ty2-OR2 Gag polyprotei...4354e-124     402     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
91P0C2J2    438   YG21A_YEAST Transposon Ty2-GR1 Gag polyprotei...4356e-124     402     50     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 117 61 - 90
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::