Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR364C
Length:
455
Number of sequences:
5887
Description:
YDR364C CDC40 SGDID:S000002772, Chr IV from 1204210-1202843, Genome Release 64-1-1, reverse complement, Verified ORF, "Pre-mRNA splicing factor, important for catalytic step II of pre-mRNA splicing and plays a role in cell cycle progression; required for DNA synthesis during mitosis and meiosis; has WD repeats"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
751Q54WA3    316   PEX7_DICDI Peroxisomal targeting signal 2 rec...1660.2     37.4     24     43GO:0005777; C:peroxisome; ISS:dictyBase.
GO:0005053; F:peroxisome matrix targeting signal-2 binding; ISS:dictyBase.
GO:0016558; P:protein import into peroxisome matrix; IEA:InterPro.
752Q94AI7    1131   TPL_ARATH Protein TOPLESS OS=Arabidopsis thal...770.2     38.1     27     48GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0042803; F:protein homodimerization activity; IPI:TAIR.
GO:0009867; P:jasmonic acid mediated signaling pathway; IMP:TAIR.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:TAIR.::GO:0010072; P:primary shoot apical meristem specification; IMP:TAIR.::GO:0009733; P:response to auxin stimulus; IPI:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0010051; P:xylem and phloem pattern formation; IGI:TAIR.
753Q0J3D9    1218   COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza...780.21     37.7     29     50GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
754Q94A40    1216   COPA1_ARATH Coatomer subunit alpha-1 OS=Arabi...1620.21     38.1     21     43GO:0030126; C:COPI vesicle coat; IEA:InterPro.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005886; C:plasma membrane; IDA:TAIR.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
755Q9NRL3    753   STRN4_HUMAN Striatin-4 OS=Homo sapiens (Human...1470.22     37.7     24     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0070016; F:armadillo repeat domain binding; IPI:UniProtKB.::GO:0005516; F:calmodulin binding; NAS:UniProtKB.::GO:0032403; F:protein complex binding; IDA:UniProtKB.::GO:0051721; F:protein phosphatase 2A binding; IDA:UniProtKB.
756Q9FNZ2    430   C3H48_ARATH Zinc finger CCCH domain-containin...790.22     37.4     30     51
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
757P70483    780   STRN_RAT Striatin OS=Rattus norvegicus (Rat)....1840.22     37.7     22     36GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0043025; C:neuronal cell body; IDA:RGD.::GO:0014069; C:postsynaptic density; IDA:RGD.::GO:0045211; C:postsynaptic membrane; IDA:RGD.
GO:0048306; F:calcium-dependent protein binding; NAS:RGD.::GO:0005516; F:calmodulin binding; IDA:RGD.
GO:0016358; P:dendrite development; IMP:RGD.::GO:0007626; P:locomotory behavior; IMP:RGD.
758Q9V3J8    361   WDS_DROME Protein will die slowly OS=Drosophi...1500.23     37.4     27     39GO:0005671; C:Ada2/Gcn5/Ada3 transcription activator complex; IPI:FlyBase.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0048188; C:Set1C/COMPASS complex; IDA:FlyBase.
GO:0051568; P:histone H3-K4 methylation; IMP:FlyBase.::GO:0007095; P:mitotic cell cycle G2/M transition DNA damage checkpoint; IGI:FlyBase.
759A2CEH0    490   POC1B_DANRE POC1 centriolar protein homolog B...1680.23     37.4     27     42
GO:0042384; P:cilium assembly; ISS:UniProtKB.::GO:0060287; P:epithelial cilium movement involved in determination of left/right asymmetry; IMP:ZFIN.::GO:0003014; P:renal system process; IMP:ZFIN.
760C5FP68    674   SCONB_ARTOC Probable E3 ubiquitin ligase comp...750.23     37.7     32     44
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
761A9VDW7    506   CIAO1_MONBE Probable cytosolic iron-sulfur pr...770.23     37.4     27     52
762P26308    340   GBB1_DROME Guanine nucleotide-binding protein...710.24     37.4     28     52GO:0005875; C:microtubule associated complex; IDA:FlyBase.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007015; P:actin filament organization; IMP:FlyBase.::GO:0045176; P:apical protein localization; TAS:FlyBase.::GO:0055059; P:asymmetric neuroblast division; IMP:FlyBase.
763Q9HAV0    340   GBB4_HUMAN Guanine nucleotide-binding protein...720.24     37.4     29     53GO:0005886; C:plasma membrane; TAS:Reactome.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0071377; P:cellular response to glucagon stimulus; TAS:Reactome.::GO:0006112; P:energy reserve metabolic process; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.
764P29387    340   GBB4_MOUSE Guanine nucleotide-binding protein...710.24     37.4     28     51
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; TAS:MGI.
765Q5ZK69    392   PAAF1_CHICK Proteasomal ATPase-associated fac...1410.24     37.4     26     40GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
766Q756D0    445   YTM1_ASHGO Ribosome biogenesis protein YTM1 O...640.24     37.4     27     53GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
767Q11176    611   WDR1_CAEEL Actin-interacting protein 1 OS=Cae...1790.24     37.7     21     44GO:0042643; C:actomyosin, actin part; IDA:WormBase.::GO:0030016; C:myofibril; IDA:WormBase.::GO:0016528; C:sarcoplasm; IDA:WormBase.
GO:0051015; F:actin filament binding; IDA:WormBase.
GO:0051016; P:barbed-end actin filament capping; ISS:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0030836; P:positive regulation of actin filament depolymerization; IDA:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040017; P:positive regulation of locomotion; IMP:WormBase.
768P0CS44    757   MDV1_CRYNJ Mitochondrial division protein 1 O...420.24     37.7     31     64GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
769P0CS45    757   MDV1_CRYNB Mitochondrial division protein 1 O...420.24     37.7     31     64GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
770Q9P7I3    651   MDV1_SCHPO Mitochondrial division protein 1 O...2600.24     37.7     24     40GO:0030015; C:CCR4-NOT core complex; NAS:PomBase.::GO:0005741; C:mitochondrial outer membrane; ISS:PomBase.
GO:0051020; F:GTPase binding; NAS:PomBase.
GO:0000266; P:mitochondrial fission; ISS:PomBase.::GO:0000002; P:mitochondrial genome maintenance; ISS:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; ISS:PomBase.::GO:0006354; P:transcription elongation, DNA-dependent; IC:PomBase.
771B9WD30    489   LIS1_CANDC Nuclear distribution protein PAC1 ...970.25     37.4     26     48GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
772Q5SP67    576   WDR26_DANRE WD repeat-containing protein 26 O...2730.25     37.4     19     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
773Q3Y8L7    446   WDR69_CHLRE Outer row dynein assembly protein...790.26     37.4     27     48GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0035086; C:flagellar axoneme; IEA:UniProtKB-SubCell.::GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.
774Q05BV3    1969   EMAL5_HUMAN Echinoderm microtubule-associated...1880.26     37.7     25     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
775Q5ZMC3    476   WSDU1_CHICK WD repeat, SAM and U-box domain-c...1020.26     37.4     28     43GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
776Q758R7    715   MDV1_ASHGO Mitochondrial division protein 1 O...870.29     37.4     25     52GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
777Q8C4J7    801   TBL3_MOUSE Transducin beta-like protein 3 OS=...2210.29     37.4     22     36GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:InterPro.
778Q62440    770   TLE1_MOUSE Transducin-like enhancer protein 1...1710.29     37.4     22     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005667; C:transcription factor complex; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003714; F:transcription corepressor activity; IDA:MGI.
GO:0043124; P:negative regulation of I-kappaB kinase/NF-kappaB cascade; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
779Q28D01    614   WDR26_XENTR WD repeat-containing protein 26 O...2880.29     37.4     19     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
780Q9LJR3    845   SPA3_ARATH Protein SPA1-RELATED 3 OS=Arabidop...1060.29     37.4     27     45GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0004672; F:protein kinase activity; IEA:InterPro.
GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.
781Q9SJT9    1218   COPA2_ARATH Coatomer subunit alpha-2 OS=Arabi...1620.3     37.4     21     42GO:0030126; C:COPI vesicle coat; IEA:InterPro.::GO:0005829; C:cytosol; IDA:TAIR.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
records
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