Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR364C
Length:
455
Number of sequences:
5887
Description:
YDR364C CDC40 SGDID:S000002772, Chr IV from 1204210-1202843, Genome Release 64-1-1, reverse complement, Verified ORF, "Pre-mRNA splicing factor, important for catalytic step II of pre-mRNA splicing and plays a role in cell cycle progression; required for DNA synthesis during mitosis and meiosis; has WD repeats"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
661Q7KWL3    445   DCA13_DICDI DDB1- and CUL4-associated factor ...2990.055     39.3     21     35GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
662Q84JM4    1108   TPR3_ARATH Topless-related protein 3 OS=Arabi...2030.055     39.7     22     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:TAIR.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
663Q05946    817   UTP13_YEAST U3 small nucleolar RNA-associated...1630.056     39.7     23     40GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; IPI:SGD.
GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
664C4YPI7    486   LIS1_CANAW Nuclear distribution protein PAC1 ...970.057     39.3     26     49GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
665Q5A7Q6    486   LIS1_CANAL Nuclear distribution protein PAC1 ...970.057     39.3     26     49GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
666Q3ULA2    605   FBW1A_MOUSE F-box/WD repeat-containing protei...1800.058     39.7     21     41GO:0005829; C:cytosol; TAS:Reactome.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0019005; C:SCF ubiquitin ligase complex; ISS:UniProtKB.
GO:0008013; F:beta-catenin binding; IDA:BHF-UCL.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0045309; F:protein phosphorylated amino acid binding; IDA:BHF-UCL.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:BHF-UCL.
GO:0060444; P:branching involved in mammary gland duct morphogenesis; IMP:MGI.::GO:0071407; P:cellular response to organic cyclic compound; IDA:MGI.::GO:0033598; P:mammary gland epithelial cell proliferation; IMP:MGI.::GO:0045892; P:negative regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0042753; P:positive regulation of circadian rhythm; IMP:UniProtKB.::GO:0045862; P:positive regulation of proteolysis; ISS:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0006470; P:protein dephosphorylation; IDA:UniProtKB.::GO:0031648; P:protein destabilization; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:BHF-UCL.::GO:0051726; P:regulation of cell cycle; IMP:MGI.::GO:0043122; P:regulation of I-kappaB kinase/NF-kappaB cascade; IMP:MGI.::GO:0061136; P:regulation of proteasomal protein catabolic process; IDA:MGI.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
667Q4V7Y7    655   KTNB1_XENLA Katanin p80 WD40-containing subun...1650.061     39.7     18     47GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
668Q148I1    392   PAAF1_BOVIN Proteasomal ATPase-associated fac...1310.061     39.3     27     39GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
669O43815    780   STRN_HUMAN Striatin OS=Homo sapiens (Human). ...2050.062     39.7     21     37GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0043025; C:neuronal cell body; ISS:UniProtKB.::GO:0014069; C:postsynaptic density; ISS:UniProtKB.::GO:0045211; C:postsynaptic membrane; ISS:UniProtKB.::GO:0005923; C:tight junction; IDA:UniProtKB.
GO:0070016; F:armadillo repeat domain binding; IPI:UniProtKB.::GO:0005516; F:calmodulin binding; ISS:UniProtKB.::GO:0030331; F:estrogen receptor binding; IPI:UniProtKB.::GO:0032403; F:protein complex binding; IDA:UniProtKB.::GO:0051721; F:protein phosphatase 2A binding; IDA:UniProtKB.
GO:0016358; P:dendrite development; ISS:UniProtKB.::GO:0007626; P:locomotory behavior; ISS:UniProtKB.::GO:0008285; P:negative regulation of cell proliferation; IMP:UniProtKB.::GO:0070830; P:tight junction assembly; NAS:UniProtKB.::GO:0016055; P:Wnt receptor signaling pathway; IMP:UniProtKB.
670P41811    889   COPB2_YEAST Coatomer subunit beta' OS=Sacchar...1670.064     39.7     20     43GO:0030126; C:COPI vesicle coat; IGI:SGD.
GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0032511; P:late endosome to vacuole transport via multivesicular body sorting pathway; IMP:SGD.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IMP:SGD.
671Q8N157    1196   AHI1_HUMAN Jouberin OS=Homo sapiens (Human). ...2200.065     39.7     23     38GO:0005912; C:adherens junction; IDA:UniProtKB.::GO:0005911; C:cell-cell junction; IDA:UniProtKB.::GO:0005814; C:centriole; ISS:UniProtKB.::GO:0005932; C:microtubule basal body; IDA:UniProtKB.::GO:0036038; C:TCTN-B9D complex; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0042384; P:cilium assembly; ISS:UniProtKB.::GO:0035844; P:cloaca development; ISS:UniProtKB.::GO:0001947; P:heart looping; ISS:UniProtKB.::GO:0030902; P:hindbrain development; ISS:UniProtKB.::GO:0070121; P:Kupffer's vesicle development; ISS:UniProtKB.::GO:0070986; P:left/right axis specification; ISS:UniProtKB.::GO:0001738; P:morphogenesis of a polarized epithelium; ISS:UniProtKB.::GO:0043066; P:negative regulation of apoptotic process; ISS:UniProtKB.::GO:0071599; P:otic vesicle development; ISS:UniProtKB.::GO:0035845; P:photoreceptor cell outer segment organization; ISS:UniProtKB.::GO:0030862; P:positive regulation of polarized epithelial cell differentiation; ISS:UniProtKB.::GO:0002092; P:positive regulation of receptor internalization; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0039023; P:pronephric duct morphogenesis; ISS:UniProtKB.::GO:0039008; P:pronephric nephron tubule morphogenesis; ISS:UniProtKB.::GO:0050795; P:regulation of behavior; ISS:UniProtKB.::GO:0010842; P:retina layer formation; ISS:UniProtKB.::GO:0065001; P:specification of axis polarity; ISS:UniProtKB.::GO:0007169; P:transmembrane receptor protein tyrosine kinase signaling pathway; ISS:UniProtKB.::GO:0016192; P:vesicle-mediated transport; ISS:UniProtKB.
672Q2GT28    453   LIS12_CHAGB Nuclear distribution protein PAC1...1340.067     39.3     24     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
673Q29HG9    315   LST8_DROPS Protein LST8 homolog OS=Drosophila...1780.067     38.9     22     40GO:0005737; C:cytoplasm; ISS:UniProtKB.
674P16371    730   GROU_DROME Protein groucho OS=Drosophila mela...2420.068     39.3     21     40GO:0005634; C:nucleus; TAS:FlyBase.::GO:0043234; C:protein complex; IPI:FlyBase.
GO:0071906; F:CRD domain binding; IPI:UniProtKB.::GO:0071837; F:HMG box domain binding; IPI:UniProtKB.::GO:0070491; F:repressing transcription factor binding; IGI:FlyBase.::GO:0001106; F:RNA polymerase II transcription corepressor activity; IGI:FlyBase.
GO:0007015; P:actin filament organization; IMP:FlyBase.::GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.::GO:0090090; P:negative regulation of canonical Wnt receptor signaling pathway; IDA:UniProtKB.::GO:0045879; P:negative regulation of smoothened signaling pathway; IMP:FlyBase.::GO:0007541; P:sex determination, primary response to X:A ratio; TAS:FlyBase.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
675Q7PS24    341   CIAO1_ANOGA Probable cytosolic iron-sulfur pr...2240.07     38.9     21     41
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
676B4MY77    335   CIAO1_DROWI Probable cytosolic iron-sulfur pr...2140.07     38.9     19     37
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
677Q8N9V3    476   WSDU1_HUMAN WD repeat, SAM and U-box domain-c...1500.07     39.3     24     34GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
678Q5U2W5    800   TBL3_RAT Transducin beta-like protein 3 OS=Ra...3390.07     39.3     21     36GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:InterPro.
679A8XZJ9    390   LIS1_CAEBR Lissencephaly-1 homolog OS=Caenorh...820.071     38.9     24     45GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
680Q1LV15    415   WDR69_DANRE Outer row dynein assembly protein...1470.073     38.9     20     35GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
GO:0070286; P:axonemal dynein complex assembly; IMP:UniProtKB.::GO:0060285; P:ciliary cell motility; IMP:UniProtKB.::GO:0060271; P:cilium morphogenesis; IMP:UniProtKB.::GO:0007368; P:determination of left/right symmetry; IMP:UniProtKB.
681Q9AUR7    1218   COPA2_ORYSJ Coatomer subunit alpha-2 OS=Oryza...780.073     39.3     32     50GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
682P58405    794   STRN3_RAT Striatin-3 OS=Rattus norvegicus (Ra...1770.075     39.3     24     37GO:0030425; C:dendrite; IDA:RGD.::GO:0043025; C:neuronal cell body; IDA:RGD.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0032403; F:protein complex binding; IDA:RGD.
GO:0033147; P:negative regulation of intracellular estrogen receptor signaling pathway; IMP:RGD.::GO:0032355; P:response to estradiol stimulus; IDA:RGD.
683Q4P8R5    814   MDV1_USTMA Mitochondrial division protein 1 O...2540.077     39.3     19     37GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
684A2RRH5    827   WDR27_HUMAN WD repeat-containing protein 27 O...3800.079     39.3     18     37
685Q13033    797   STRN3_HUMAN Striatin-3 OS=Homo sapiens (Human...1780.083     39.3     25     37GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0030425; C:dendrite; ISS:UniProtKB.::GO:0005794; C:Golgi apparatus; IDA:UniProtKB.::GO:0043025; C:neuronal cell body; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0005886; C:plasma membrane; IDA:UniProtKB.::GO:0043234; C:protein complex; ISS:UniProtKB.
GO:0070016; F:armadillo repeat domain binding; IPI:UniProtKB.::GO:0005516; F:calmodulin binding; NAS:UniProtKB.::GO:0032403; F:protein complex binding; IDA:UniProtKB.::GO:0051721; F:protein phosphatase 2A binding; IDA:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:UniProtKB.
GO:0033147; P:negative regulation of intracellular estrogen receptor signaling pathway; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0032355; P:response to estradiol stimulus; ISS:UniProtKB.
686Q8CFD5    397   ERCC8_MOUSE DNA excision repair protein ERCC-...940.086     38.9     21     40
GO:0009411; P:response to UV; IMP:MGI.::GO:0010165; P:response to X-ray; IMP:MGI.
687Q9Y4P3    447   TBL2_HUMAN Transducin beta-like protein 2 OS=...2260.089     38.9     22     40
688Q8NA23    367   WDR31_HUMAN WD repeat-containing protein 31 O...1300.09     38.5     24     44
689Q55563    1693   Y163_SYNY3 Uncharacterized WD repeat-containi...630.092     39.3     29     54
GO:0005488; F:binding; IEA:InterPro.
690Q13216    396   ERCC8_HUMAN DNA excision repair protein ERCC-...950.097     38.5     21     40GO:0031464; C:Cul4A-RING ubiquitin ligase complex; IDA:UniProtKB.::GO:0016363; C:nuclear matrix; IDA:MGI.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0000109; C:nucleotide-excision repair complex; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0032403; F:protein complex binding; IDA:UniProtKB.
GO:0045739; P:positive regulation of DNA repair; IMP:UniProtKB.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB.::GO:0051865; P:protein autoubiquitination; IDA:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:UniProtKB.::GO:0006979; P:response to oxidative stress; IDA:UniProtKB.::GO:0009411; P:response to UV; IDA:UniProtKB.::GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:UniProtKB.
691Q55E54    962   COROB_DICDI Coronin-B OS=Dictyostelium discoi...1760.097     38.9     23     41GO:0031252; C:cell leading edge; IDA:dictyBase.::GO:0042995; C:cell projection; IEA:UniProtKB-SubCell.::GO:0030864; C:cortical actin cytoskeleton; IDA:dictyBase.::GO:0005829; C:cytosol; IDA:dictyBase.::GO:0001891; C:phagocytic cup; IDA:dictyBase.::GO:0045335; C:phagocytic vesicle; IBA:RefGenome.
GO:0051015; F:actin filament binding; IDA:dictyBase.
GO:0001667; P:ameboidal cell migration; IMP:dictyBase.::GO:0031589; P:cell-substrate adhesion; IMP:dictyBase.::GO:0030866; P:cortical actin cytoskeleton organization; IMP:dictyBase.::GO:0030835; P:negative regulation of actin filament depolymerization; IDA:dictyBase.::GO:0031276; P:negative regulation of lateral pseudopodium assembly; IMP:dictyBase.::GO:0006909; P:phagocytosis; IMP:dictyBase.::GO:0009617; P:response to bacterium; IMP:dictyBase.
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