Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR364C
Length:
455
Number of sequences:
5887
Description:
YDR364C CDC40 SGDID:S000002772, Chr IV from 1204210-1202843, Genome Release 64-1-1, reverse complement, Verified ORF, "Pre-mRNA splicing factor, important for catalytic step II of pre-mRNA splicing and plays a role in cell cycle progression; required for DNA synthesis during mitosis and meiosis; has WD repeats"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
511A0DB19    403   LIS11_PARTE Lissencephaly-1 homolog 1 OS=Para...2410.007     42.4     20     39GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
512Q6P1V3    422   WSB1_XENTR WD repeat and SOCS box-containing ...1980.007     42.4     22     41
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
513B4KKN1    419   WDR12_DROMO Ribosome biogenesis protein WDR12...3450.007     42.4     21     41GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
514B4HWV6    420   WDR12_DROSE Ribosome biogenesis protein WDR12...2110.007     42.4     23     43GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
515P58404    760   STRN4_MOUSE Striatin-4 OS=Mus musculus (Mouse...1900.007     42.7     25     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
516Q6QEF8    472   CORO6_HUMAN Coronin-6 OS=Homo sapiens (Human)...2310.007     42.4     24     41GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.
517P87314    932   HIR1_SCHPO Protein hir1 OS=Schizosaccharomyce...3350.007     42.7     21     34GO:0005829; C:cytosol; IDA:PomBase.::GO:0000417; C:HIR complex; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.
GO:0003682; F:chromatin binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003714; F:transcription corepressor activity; TAS:PomBase.
GO:0006995; P:cellular response to nitrogen starvation; IMP:PomBase.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0030702; P:chromatin silencing at centromere; IMP:PomBase.::GO:0030466; P:chromatin silencing at silent mating-type cassette; IMP:PomBase.::GO:0006336; P:DNA replication-independent nucleosome assembly; TAS:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0007070; P:negative regulation of transcription from RNA polymerase II promoter during mitosis; IMP:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; IMP:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
518Q21624    607   CORO_CAEEL Coronin-like protein cor-1 OS=Caen...810.007     42.4     25     53GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.::GO:0007126; P:meiosis; IMP:WormBase.
519C6HTE8    456   LIS1_AJECH Nuclear distribution protein PAC1 ...3040.008     42     22     38GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
520C0NRC6    456   LIS1_AJECG Nuclear distribution protein PAC1 ...3040.008     42     22     38GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
521Q9Z2K5    326   LST8_RAT Target of rapamycin complex subunit ...2900.008     42     20     35GO:0005829; C:cytosol; IDA:RGD.
522Q4P553    485   HAT2_USTMA Histone acetyltransferase type B s...1820.008     42.4     21     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
523Q6BLS5    466   YTM1_DEBHA Ribosome biogenesis protein YTM1 O...1090.008     42     25     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
524Q7RXH4    346   EIF3I_NEUCR Eukaryotic translation initiation...810.008     42     28     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
525Q9BVA0    655   KTNB1_HUMAN Katanin p80 WD40-containing subun...1950.009     42.4     18     46GO:0008352; C:katanin complex; TAS:UniProtKB.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IDA:HPA.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0008017; F:microtubule binding; NAS:UniProtKB.::GO:0046982; F:protein heterodimerization activity; IPI:UniProtKB.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007026; P:negative regulation of microtubule depolymerization; IMP:UniProtKB.::GO:0031117; P:positive regulation of microtubule depolymerization; IMP:UniProtKB.::GO:0006605; P:protein targeting; NAS:UniProtKB.
526Q8BG40    658   KTNB1_MOUSE Katanin p80 WD40-containing subun...1950.009     42     18     46GO:0030424; C:axon; IDA:MGI.::GO:0005813; C:centrosome; IDA:MGI.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0045502; F:dynein binding; IDA:MGI.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
527Q93134    316   GBLP_BIOGL Guanine nucleotide-binding protein...1680.009     41.6     21     44
528B4P7Q3    335   CIAO1_DROYA Probable cytosolic iron-sulfur pr...1600.009     41.6     24     41
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
529Q5H7C0    499   CDC20_PIG Cell division cycle protein 20 homo...1450.009     42     23     43GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051488; P:activation of anaphase-promoting complex activity; ISS:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0090129; P:positive regulation of synapse maturation; ISS:UniProtKB.::GO:0031915; P:positive regulation of synaptic plasticity; ISS:UniProtKB.
530Q5I0B4    326   LST8_XENTR Target of rapamycin complex subuni...2450.009     41.6     22     38GO:0005737; C:cytoplasm; ISS:UniProtKB.
531Q6PA72    326   LST8_XENLA Target of rapamycin complex subuni...2450.009     41.6     22     38GO:0005737; C:cytoplasm; ISS:UniProtKB.
532Q4WTI3    795   ERB1_ASPFU Ribosome biogenesis protein erb1 O...790.009     42.4     25     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
533B0XQ42    796   ERB1_ASPFC Ribosome biogenesis protein erb1 O...790.009     42.4     25     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
534P23232    341   GBB_LOLFO Guanine nucleotide-binding protein ...710.01     41.6     32     51
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
535A0CH87    403   LIS12_PARTE Lissencephaly-1 homolog 2 OS=Para...1320.01     41.6     23     45GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
536P14197    478   AAC3_DICDI WD repeat-containing protein AAC3 ...2860.01     42     21     39
537Q5AXW3    654   MDV1_EMENI Mitochondrial division protein 1 O...630.01     42     30     49GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
538P56094    682   TUP1_KLULA General transcriptional corepresso...850.011     42     28     51
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
539Q6GL39    313   WDR82_XENTR WD repeat-containing protein 82 O...1970.011     41.6     24     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
540Q8VE80    351   THOC3_MOUSE THO complex subunit 3 OS=Mus musc...2470.011     41.6     19     40
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
541A8PD13    448   YTM1_COPC7 Ribosome biogenesis protein YTM1 O...1050.011     41.6     26     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
records
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