Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR364C
Length:
455
Number of sequences:
5887
Description:
YDR364C CDC40 SGDID:S000002772, Chr IV from 1204210-1202843, Genome Release 64-1-1, reverse complement, Verified ORF, "Pre-mRNA splicing factor, important for catalytic step II of pre-mRNA splicing and plays a role in cell cycle progression; required for DNA synthesis during mitosis and meiosis; has WD repeats"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
421Q9Y6I7    421   WSB1_HUMAN WD repeat and SOCS box-containing ...1880.002     43.9     23     44GO:0005622; C:intracellular; IDA:LIFEdb.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
422B1ANS9    1081   WDR64_HUMAN WD repeat-containing protein 64 O...1750.002     44.7     21     42
423Q6C553    1058   HIR1_YARLI Protein HIR1 OS=lipolytica). GN=HI...1820.002     44.7     25     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
424Q54W52    463   WDR12_DICDI Ribosome biogenesis protein WDR12...2650.002     44.3     19     40GO:0005730; C:nucleolus; ISS:dictyBase.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0042273; P:ribosomal large subunit biogenesis; ISS:dictyBase.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
425O35828    443   CORO7_RAT Coronin-7 OS=Rattus norvegicus (Rat...810.002     44.3     31     49GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0000299; C:integral to membrane of membrane fraction; ISS:UniProtKB.::GO:0005625; C:soluble fraction; ISS:UniProtKB.
426Q2UGK1    487   YTM1_ASPOR Ribosome biogenesis protein ytm1 O...2690.002     44.3     22     36GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
427Q7ZWF0    368   RAE1L_DANRE mRNA export factor OS=Danio rerio...1030.002     43.9     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
428Q759L2    346   EIF3I_ASHGO Eukaryotic translation initiation...2140.002     43.9     20     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
429Q40153    473   LE14B_LITER LEC14B protein OS=var. erythrorhi...1000.002     43.9     28     47
430P87060    775   POP1_SCHPO WD repeat-containing protein pop1 ...910.002     44.3     27     47GO:0005634; C:nucleus; IDA:PomBase.::GO:0019005; C:SCF ubiquitin ligase complex; IDA:PomBase.
GO:0030674; F:protein binding, bridging; IPI:PomBase.
GO:0006995; P:cellular response to nitrogen starvation; IGI:PomBase.::GO:0000747; P:conjugation with cellular fusion; IMP:PomBase.::GO:0008054; P:cyclin catabolic process; IMP:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; IC:PomBase.
431Q5RBZ2    342   MEP50_PONAB Methylosome protein 50 OS=Pongo a...1570.002     43.9     22     43GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
432P0CS30    440   CIAO1_CRYNJ Probable cytosolic iron-sulfur pr...2250.002     43.9     20     40
433P0CS31    440   CIAO1_CRYNB Probable cytosolic iron-sulfur pr...2250.002     43.9     20     40
434B7QKS1    315   CIAO1_IXOSC Probable cytosolic iron-sulfur pr...3020.002     43.5     20     40
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
435B7FF09    1089   WDY_DROWI WD repeat-containing protein on Y c...2800.002     44.3     19     37
GO:0005509; F:calcium ion binding; IEA:InterPro.
436A3LQ86    467   YTM1_PICST Ribosome biogenesis protein YTM1 O...1110.002     43.9     26     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
437Q6P3H7    424   RBBP4_DANRE Histone-binding protein RBBP4 OS=...1750.002     43.9     25     46GO:0033186; C:CAF-1 complex; ISS:UniProtKB.::GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0031497; P:chromatin assembly; ISS:UniProtKB.::GO:0006338; P:chromatin remodeling; ISS:HGNC.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
438Q3SZD4    432   WDR18_BOVIN WD repeat-containing protein 18 O...1910.002     43.9     21     38
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
439P59328    1117   WDHD1_MOUSE WD repeat and HMG-box DNA-binding...2950.002     44.3     21     40GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
440B4QHG6    411   LIS1_DROSI Lissencephaly-1 homolog OS=Drosoph...1600.003     43.5     23     44GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
441B4HSL3    411   LIS1_DROSE Lissencephaly-1 homolog OS=Drosoph...1600.003     43.5     23     44GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
442Q7KNS3    411   LIS1_DROME Lissencephaly-1 homolog OS=Drosoph...1600.003     43.5     23     44GO:0030424; C:axon; IDA:UniProtKB.::GO:0005938; C:cell cortex; IDA:FlyBase.::GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0030425; C:dendrite; IDA:UniProtKB.::GO:0005869; C:dynactin complex; IDA:FlyBase.::GO:0030286; C:dynein complex; IDA:FlyBase.::GO:0005828; C:kinetochore microtubule; IDA:FlyBase.::GO:0043025; C:neuronal cell body; IDA:UniProtKB.::GO:0031616; C:spindle pole centrosome; IDA:FlyBase.
GO:0045502; F:dynein binding; ISS:UniProtKB.
GO:0008088; P:axon cargo transport; IMP:FlyBase.::GO:0051299; P:centrosome separation; IMP:FlyBase.::GO:0030381; P:chorion-containing eggshell pattern formation; IMP:UniProtKB.::GO:0007303; P:cytoplasmic transport, nurse cell to oocyte; IMP:FlyBase.::GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.::GO:0046843; P:dorsal appendage formation; IMP:UniProtKB.::GO:0048142; P:germarium-derived cystoblast division; IMP:UniProtKB.::GO:0007294; P:germarium-derived oocyte fate determination; IMP:UniProtKB.::GO:0008298; P:intracellular mRNA localization; IMP:UniProtKB.::GO:0006886; P:intracellular protein transport; IMP:FlyBase.::GO:0051383; P:kinetochore organization; IMP:FlyBase.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007093; P:mitotic cell cycle checkpoint; IMP:FlyBase.::GO:0016319; P:mushroom body development; IMP:UniProtKB.::GO:0007405; P:neuroblast proliferation; IMP:UniProtKB.::GO:0030473; P:nuclear migration along microtubule; IGI:FlyBase.::GO:0007312; P:oocyte nucleus migration involved in oocyte dorsal/ventral axis specification; IMP:FlyBase.::GO:0030723; P:ovarian fusome organization; IMP:UniProtKB.::GO:0030510; P:regulation of BMP signaling pathway; IDA:FlyBase.::GO:0048814; P:regulation of dendrite morphogenesis; IMP:FlyBase.::GO:0043143; P:regulation of translation by machinery localization; IMP:UniProtKB.::GO:0051225; P:spindle assembly; IMP:FlyBase.::GO:0019827; P:stem cell maintenance; IDA:FlyBase.
443Q17GR9    337   CIAO1_AEDAE Probable cytosolic iron-sulfur pr...1630.003     43.1     23     40
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
444Q5VQ78    907   COB21_ORYSJ Coatomer subunit beta'-1 OS=Oryza...2190.003     43.9     20     43GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
445B8M0Q1    459   LIS1_TALSN Nuclear distribution protein nudF ...1580.003     43.5     24     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
446P36130    643   CAF4_YEAST CCR4-associated factor 4 OS=Saccha...3240.003     43.9     22     39GO:0030014; C:CCR4-NOT complex; IDA:SGD.::GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
GO:0000266; P:mitochondrial fission; IMP:SGD.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:SGD.
447Q0CJD8    654   MDV1_ASPTN Mitochondrial division protein 1 O...630.003     43.9     32     51GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
448Q8N136    415   WDR69_HUMAN Outer row dynein assembly protein...2280.003     43.5     21     38GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
449O35142    905   COPB2_RAT Coatomer subunit beta' OS=Rattus no...870.003     43.9     25     53GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005080; F:protein kinase C binding; IPI:RGD.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
450Q4R8E7    415   WDR69_MACFA Outer row dynein assembly protein...2330.003     43.5     21     37GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
451Q9DCJ1    326   LST8_MOUSE Target of rapamycin complex subuni...2880.003     43.5     20     36
GO:0030838; P:positive regulation of actin filament polymerization; IMP:MGI.::GO:0050731; P:positive regulation of peptidyl-tyrosine phosphorylation; IMP:MGI.::GO:0032314; P:regulation of Rac GTPase activity; IMP:MGI.
records
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