Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR363W-A
Length:
89
Number of sequences:
5887
Description:
YDR363W-A SEM1 SGDID:S000007235, Chr IV from 1202128-1202397, Genome Release 64-1-1, Verified ORF, "Component of the lid subcomplex of the regulatory subunit of the 26S proteasome; involved in mRNA export mediated by the TREX-2 complex (Sac3p-Thp1p); ortholog of human DSS1"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1O94742    89   SEM1_YEAST 26S proteasome complex subunit SEM...891e-56     175     100     100GO:0005792; C:microsome; IDA:SGD.::GO:0005634; C:nucleus; IPI:SGD.::GO:0008541; C:proteasome regulatory particle, lid subcomplex; IDA:SGD.::GO:0034515; C:proteasome storage granule; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006887; P:exocytosis; IPI:SGD.::GO:0030447; P:filamentous growth; IMP:SGD.::GO:0006406; P:mRNA export from nucleus; IMP:SGD.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IDA:SGD.::GO:0043248; P:proteasome assembly; IMP:SGD.::GO:0051726; P:regulation of cell cycle; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
2Q7SA04    91   SEM1_NEUCR Putative 26S proteasome complex su...570.000004     44.7     51     68GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
3P62499    69   SEM1_ASHGO Probable 26S proteasome complex su...610.000006     43.9     56     77GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
4P60897    70   DSS1_MOUSE 26S proteasome complex subunit DSS...280.0002     39.7     54     89GO:0000502; C:proteasome complex; ISS:UniProtKB.
GO:0008233; F:peptidase activity; ISS:UniProtKB.::GO:0005515; F:protein binding; IPI:MGI.
GO:0000724; P:double-strand break repair via homologous recombination; IMP:MGI.::GO:0006508; P:proteolysis; ISS:UniProtKB.
5P60896    70   DSS1_HUMAN 26S proteasome complex subunit DSS...280.0002     39.7     54     89GO:0000502; C:proteasome complex; IDA:UniProtKB.
GO:0008233; F:peptidase activity; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006508; P:proteolysis; IDA:UniProtKB.
6Q3ZBR6    70   DSS1_BOVIN 26S proteasome complex subunit DSS...280.0002     39.7     54     89GO:0000502; C:proteasome complex; ISS:UniProtKB.
GO:0008233; F:peptidase activity; ISS:UniProtKB.
GO:0006508; P:proteolysis; ISS:UniProtKB.
7Q9VM46    79   SEM1_DROME Probable 26S proteasome complex su...320.0006     38.5     53     75GO:0000502; C:proteasome complex; ISS:UniProtKB.
GO:0008233; F:peptidase activity; ISS:UniProtKB.
GO:0006508; P:proteolysis; ISS:UniProtKB.
8A8XLU5    76   DSS1_CAEBR Probable 26S proteasome complex su...460.58     30.4     39     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
9Q95Y72    82   DSS1_CAEEL Probable 26S proteasome complex su...270.62     30.4     44     70GO:0005737; C:cytoplasm; IDA:WormBase.::GO:0005634; C:nucleus; IDA:WormBase.::GO:0000502; C:proteasome complex; ISS:UniProtKB.
GO:0008233; F:peptidase activity; ISS:UniProtKB.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0060429; P:epithelium development; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0050892; P:intestinal absorption; IMP:WormBase.::GO:0048477; P:oogenesis; IMP:WormBase.::GO:0040018; P:positive regulation of multicellular organism growth; IMP:WormBase.::GO:0031398; P:positive regulation of protein ubiquitination; IGI:WormBase.::GO:0006508; P:proteolysis; ISS:UniProtKB.::GO:0040025; P:vulval development; IMP:WormBase.
10O14140    71   DSS1_SCHPO mRNA export factor dss1 OS=Schizos...562.5     28.5     43     59GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:PomBase.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IGI:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; IMP:PomBase.::GO:0006974; P:response to DNA damage stimulus; ISS:PomBase.
11Q96RQ1    377   ERGI2_HUMAN Endoplasmic reticulum-Golgi inter...732.7     29.6     27     52GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0033116; C:endoplasmic reticulum-Golgi intermediate compartment membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
12Q5EHU7    377   ERGI2_GECJA Endoplasmic reticulum-Golgi inter...732.8     29.6     27     52GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0033116; C:endoplasmic reticulum-Golgi intermediate compartment membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
13Q4R5C3    377   ERGI2_MACFA Endoplasmic reticulum-Golgi inter...732.8     29.6     27     52GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0033116; C:endoplasmic reticulum-Golgi intermediate compartment membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
14Q9CR89    377   ERGI2_MOUSE Endoplasmic reticulum-Golgi inter...736     28.9     26     52GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0033116; C:endoplasmic reticulum-Golgi intermediate compartment membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006888; P:ER to Golgi vesicle-mediated transport; ISS:HGNC.
15Q8L840    1188   RQL4A_ARATH ATP-dependent DNA helicase Q-like...678.7     28.5     28     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0009506; C:plasmodesma; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0043140; F:ATP-dependent 3'-5' DNA helicase activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0071215; P:cellular response to abscisic acid stimulus; IEP:UniProtKB.::GO:0070417; P:cellular response to cold; IEP:UniProtKB.::GO:0051276; P:chromosome organization; IMP:TAIR.::GO:0006260; P:DNA replication; IEA:InterPro.::GO:0000724; P:double-strand break repair via homologous recombination; IMP:TAIR.
16Q7T2D4    376   ERGI2_DANRE Endoplasmic reticulum-Golgi inter...739     28.1     29     48GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0033116; C:endoplasmic reticulum-Golgi intermediate compartment membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
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