Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR363W
Length:
89
Number of sequences:
5887
Description:
YDR363W-A SEM1 SGDID:S000007235, Chr IV from 1202128-1202397, Genome Release 64-1-1, Verified ORF, "Component of the lid subcomplex of the regulatory subunit of the 26S proteasome; involved in mRNA export mediated by the TREX-2 complex (Sac3p-Thp1p); ortholog of human DSS1"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q5R6J4    101   SUMO1_PONAB Small ubiquitin-related modifier ...720.025     38.1     26     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0031625; F:ubiquitin protein ligase binding; ISS:UniProtKB.
GO:0060021; P:palate development; ISS:UniProtKB.
32A7WLH8    101   SUMO1_PIG Small ubiquitin-related modifier 1 ...720.025     38.1     26     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0031625; F:ubiquitin protein ligase binding; ISS:UniProtKB.
GO:0060021; P:palate development; ISS:UniProtKB.
33P63166    101   SUMO1_MOUSE Small ubiquitin-related modifier ...720.025     38.1     26     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0016605; C:PML body; TAS:MGI.
GO:0019789; F:SUMO ligase activity; IDA:MGI.::GO:0008134; F:transcription factor binding; IPI:MGI.::GO:0031625; F:ubiquitin protein ligase binding; ISS:UniProtKB.
GO:0060021; P:palate development; IMP:UniProtKB.::GO:0016925; P:protein sumoylation; ISS:UniProtKB.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
34P63165    101   SUMO1_HUMAN Small ubiquitin-related modifier ...720.025     38.1     26     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; TAS:ProtInc.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0031625; F:ubiquitin protein ligase binding; IPI:UniProtKB.
GO:0006281; P:DNA repair; TAS:ProtInc.::GO:0060333; P:interferon-gamma-mediated signaling pathway; TAS:Reactome.::GO:0043392; P:negative regulation of DNA binding; IMP:UniProtKB.::GO:0043433; P:negative regulation of sequence-specific DNA binding transcription factor activity; IMP:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0060021; P:palate development; ISS:UniProtKB.::GO:0032436; P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB.::GO:0031334; P:positive regulation of protein complex assembly; IDA:BHF-UCL.::GO:0016925; P:protein sumoylation; IDA:UniProtKB.::GO:0060334; P:regulation of interferon-gamma-mediated signaling pathway; TAS:Reactome.::GO:0032880; P:regulation of protein localization; TAS:UniProtKB.
35Q5E9D1    101   SUMO1_BOVIN Small ubiquitin-related modifier ...720.025     38.1     26     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0031625; F:ubiquitin protein ligase binding; ISS:UniProtKB.
GO:0060021; P:palate development; ISS:UniProtKB.
36Q6EEV6    95   SUMO4_HUMAN Small ubiquitin-related modifier ...710.025     38.1     28     51
37Q9MZD5    101   SUMO1_CERNI Small ubiquitin-related modifier ...720.026     38.1     26     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0031625; F:ubiquitin protein ligase binding; ISS:UniProtKB.
GO:0060021; P:palate development; ISS:UniProtKB.
38Q6DEP7    102   SUMO1_XENTR Small ubiquitin-related modifier ...790.12     35.8     23     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
39Q5EAX4    102   SMO1B_XENLA Small ubiquitin-related modifier ...790.12     35.8     23     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
40P55852    100   SUMO1_ARATH Small ubiquitin-related modifier ...660.14     35.8     29     48GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0031386; F:protein tag; IDA:TAIR.
GO:0010286; P:heat acclimation; IMP:UniProtKB.::GO:0043433; P:negative regulation of sequence-specific DNA binding transcription factor activity; IMP:UniProtKB.::GO:0016925; P:protein sumoylation; IEP:TAIR.
41A7WLI0    95   SUMO4_PIG Small ubiquitin-related modifier 4 ...710.19     35.4     27     51
42Q1GBF7    671   DNLJ_LACDA DNA ligase OS=20081). GN=ligA Orde...800.35     37     31     51GO:0005622; C:intracellular; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003911; F:DNA ligase (NAD+) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
43Q04BW0    671   DNLJ_LACDB DNA ligase OS=Lactobacillus delbru...800.36     37     31     51GO:0005622; C:intracellular; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003911; F:DNA ligase (NAD+) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
44P55857    100   SUMO1_ORYSJ Small ubiquitin-related modifier ...720.58     33.9     25     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
45Q9FLP6    103   SUMO2_ARATH Small ubiquitin-related modifier ...721.5     32.7     25     49GO:0005737; C:cytoplasm; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0031386; F:protein tag; IDA:TAIR.
GO:0016925; P:protein sumoylation; IEP:TAIR.::GO:0009408; P:response to heat; IEP:TAIR.
46P55853    91   SUMO_CAEEL Small ubiquitin-related modifier O...721.5     32.7     24     60
GO:0042802; F:identical protein binding; IPI:IntAct.
GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0040002; P:collagen and cuticulin-based cuticle development; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0001703; P:gastrulation with mouth forming first; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:WormBase.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0034502; P:protein localization to chromosome; IMP:WormBase.::GO:0070194; P:synaptonemal complex disassembly; IMP:WormBase.::GO:0040025; P:vulval development; IMP:WormBase.
47Q24WC0    607   UVRC_DESHY UvrABC system protein C OS=Desulfi...622.1     34.7     37     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0009380; C:excinuclease repair complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
48O61213    1497   DUOX1_CAEEL Dual oxidase 1 OS=Caenorhabditis ...1442.2     34.7     23     46GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0009055; F:electron carrier activity; IEA:InterPro.::GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0020037; F:heme binding; IDA:WormBase.::GO:0016174; F:NAD(P)H oxidase activity; IEA:EC.::GO:0004601; F:peroxidase activity; IDA:WormBase.
GO:0042338; P:cuticle development involved in collagen and cuticulin-based cuticle molting cycle; IGI:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0042744; P:hydrogen peroxide catabolic process; IEA:UniProtKB-KW.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0018149; P:peptide cross-linking; IDA:WormBase.::GO:0040032; P:post-embryonic body morphogenesis; IGI:WormBase.
49A8YTZ3    668   DNLJ_LACH4 DNA ligase OS=Lactobacillus helvet...742.3     34.3     30     49GO:0005622; C:intracellular; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003911; F:DNA ligase (NAD+) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
50P83038    1080   HDAC4_CHICK Histone deacetylase 4 OS=Gallus g...772.4     34.7     36     58GO:0000118; C:histone deacetylase complex; TAS:UniProtKB.
GO:0032041; F:NAD-dependent histone deacetylase activity (H3-K14 specific); IEA:EC.::GO:0046969; F:NAD-dependent histone deacetylase activity (H3-K9 specific); IEA:EC.::GO:0046970; F:NAD-dependent histone deacetylase activity (H4-K16 specific); IEA:EC.::GO:0008134; F:transcription factor binding; TAS:UniProtKB.
GO:0030183; P:B cell differentiation; TAS:UniProtKB.::GO:0006954; P:inflammatory response; TAS:UniProtKB.::GO:0045843; P:negative regulation of striated muscle tissue development; TAS:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; TAS:UniProtKB.::GO:0007399; P:nervous system development; TAS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
51O42938    942   K6PF_SCHPO 6-phosphofructokinase OS=Schizosac...504.3     33.5     36     56GO:0005945; C:6-phosphofructokinase complex; IDA:PomBase.
GO:0003872; F:6-phosphofructokinase activity; ISS:PomBase.::GO:0005524; F:ATP binding; IDA:PomBase.::GO:0070095; F:fructose-6-phosphate binding; IDA:PomBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006096; P:glycolysis; ISS:PomBase.
52Q5FLL4    668   DNLJ_LACAC DNA ligase OS=Lactobacillus acidop...744.9     33.5     30     50GO:0005622; C:intracellular; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003911; F:DNA ligase (NAD+) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
53O17972    682   NPHP1_CAEEL Nephrocystin-1-like protein OS=Ca...1105.1     33.5     27     53GO:0035869; C:ciliary transition zone; IDA:WormBase.::GO:0005932; C:microtubule basal body; IDA:WormBase.
GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0035058; P:nonmotile primary cilium assembly; IMP:WormBase.::GO:0008104; P:protein localization; IGI:WormBase.::GO:0034606; P:response to hermaphrodite contact; IMP:WormBase.::GO:0034607; P:turning behavior involved in mating; IMP:WormBase.::GO:0034608; P:vulval location; IMP:WormBase.
54P24043    3122   LAMA2_HUMAN Laminin subunit alpha-2 OS=Homo s...1075.8     33.5     32     45GO:0005606; C:laminin-1 complex; IEA:InterPro.
GO:0005102; F:receptor binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; TAS:ProtInc.
GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.::GO:0007517; P:muscle organ development; TAS:ProtInc.::GO:0030155; P:regulation of cell adhesion; IEA:InterPro.::GO:0030334; P:regulation of cell migration; IEA:InterPro.::GO:0045995; P:regulation of embryonic development; IEA:InterPro.
55Q12306    101   SMT3_YEAST Ubiquitin-like protein SMT3 OS=Sac...586.6     30.8     22     57GO:0000794; C:condensed nuclear chromosome; IDA:SGD.::GO:0005940; C:septin ring; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0031386; F:protein tag; IDA:SGD.
GO:0016925; P:protein sumoylation; IDA:SGD.
56Q041K2    668   DNLJ_LACGA DNA ligase OS=Lactobacillus gasser...747.5     32.7     28     51GO:0005622; C:intracellular; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003911; F:DNA ligase (NAD+) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
57Q7TNF8    1846   RIMB1_MOUSE Peripheral-type benzodiazepine re...898.1     32.7     26     51GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
records
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