UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YDR339C

Length:

189

Number of sequences:

5887

Description:

YDR339C FCF1 SGDID:S000002747, Chr IV from 1150520-1149951, Genome Release 64-1-1, reverse complement, Verified ORF, "Putative PINc domain nuclease required for early cleavages of 35S pre-rRNA and maturation of 18S rRNA; component of the SSU (small subunit) processome involved in 40S ribosomal subunit biogenesis; copurifies with Faf1p"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
1	Q05498	189	FCF1_YEAST rRNA-processing protein FCF1 OS=Sa...	189	1e-137	389	100	100	GO:0005730; C:nucleolus; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
									GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
2	O13610	192	FCF1_SCHPO rRNA-processing protein fcf1 OS=Sc...	191	2e-79	241	61	79	GO:0005730; C:nucleolus; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.
									GO:0006364; P:rRNA processing; ISS:PomBase.
3	Q5RFQ0	198	FCF1_PONAB rRNA-processing protein FCF1 homol...	194	2e-79	241	61	76	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
4	Q9Y324	198	FCF1_HUMAN rRNA-processing protein FCF1 homol...	194	2e-79	241	61	76	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
5	Q32PD0	198	FCF1_BOVIN rRNA-processing protein FCF1 homol...	194	2e-79	241	61	76	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
6	Q9CTH6	198	FCF1_MOUSE rRNA-processing protein FCF1 homol...	194	8e-78	237	60	75	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
7	Q55GM5	194	FCF1_DICDI rRNA-processing protein FCF1 homol...	171	9e-64	201	53	77	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
8	Q08DU1	248	UTP23_BOVIN rRNA-processing protein UTP23 hom...	137	0.000000000003	66.2	29	52	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
9	Q9BRU9	249	UTP23_HUMAN rRNA-processing protein UTP23 hom...	137	0.000000000003	66.2	28	52	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
10	Q9CX11	249	UTP23_MOUSE rRNA-processing protein UTP23 hom...	137	0.00000000001	64.7	28	53	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
11	O74862	260	UTP23_SCHPO rRNA-processing protein utp23 OS=...	138	0.00000000005	63.2	26	51	GO:0005730; C:nucleolus; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.
									GO:0006364; P:rRNA processing; ISS:PomBase.
12	Q12339	254	UTP23_YEAST rRNA-processing protein UTP23 OS=...	145	0.000002	50.4	25	49	GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
									GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
13	Q58716	131	VAPC4_METJA Putative ribonuclease VapC4 OS=JC...	125	0.00001	46.2	28	51
									GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.
14	Q4R4N7	944	GANAB_MACFA Neutral alpha-glucosidase AB OS=M...	97	0.71	34.3	25	47	GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0042470; C:melanosome; IEA:UniProtKB-SubCell.
									GO:0030246; F:carbohydrate binding; IEA:InterPro.::GO:0033919; F:glucan 1,3-alpha-glucosidase activity; IEA:EC.
									GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
15	A5E047	665	GEP3_LODEL Genetic interactor of prohibitins ...	155	0.84	33.9	23	40	GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
									GO:0005525; F:GTP binding; IEA:InterPro.
16	A5AEM3	392	THS4_VITVI Stilbene synthase 4 OS=Vitis vinif...	61	5.4	31.2	26	49	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0050350; F:trihydroxystilbene synthase activity; IEA:EC.
									GO:0009058; P:biosynthetic process; IEA:InterPro.::GO:0006952; P:defense response; IEA:UniProtKB-KW.
17	P51070	392	THS2_VITVI Stilbene synthase 2 OS=Vitis vinif...	61	5.9	31.2	26	49	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0050350; F:trihydroxystilbene synthase activity; IEA:EC.
									GO:0009058; P:biosynthetic process; IEA:InterPro.::GO:0006952; P:defense response; IEA:UniProtKB-KW.
18	Q84M97	742	MSL9_ARATH Mechanosensitive ion channel prote...	58	6	31.2	26	59	GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:TAIR.::GO:0005886; C:plasma membrane; IDA:TAIR.
									GO:0008381; F:mechanically-gated ion channel activity; IMP:TAIR.
									GO:0050982; P:detection of mechanical stimulus; IMP:TAIR.::GO:0080167; P:response to karrikin; IEP:TAIR.

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