Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR324C
Length:
776
Number of sequences:
5887
Description:
YDR324C UTP4 SGDID:S000002732, Chr IV from 1116763-1114433, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of U3-containing 90S preribosome and Small Subunit (SSU) processome complexes involved in production of 18S rRNA and assembly of small ribosomal subunit; member of t-Utp subcomplex involved with transcription of 35S rRNA transcript"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q06679    776   UTP4_YEAST U3 small nucleolar RNA-associated ...7760     1585     100     100GO:0032040; C:small-subunit processome; IDA:SGD.::GO:0034455; C:t-UTP complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0045943; P:positive regulation of transcription from RNA polymerase I promoter; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
2O60161    710   UTP4_SCHPO U3 small nucleolar RNA-associated ...7372e-156     479     36     57GO:0032040; C:small-subunit processome; ISS:PomBase.::GO:0005819; C:spindle; IDA:PomBase.::GO:0034455; C:t-UTP complex; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.::GO:0045943; P:positive regulation of transcription from RNA polymerase I promoter; ISS:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
3Q8R2N2    686   CIR1A_MOUSE Cirhin OS=Mus musculus (Mouse). G...7531e-47     183     25     44GO:0005730; C:nucleolus; ISS:UniProtKB.
4Q969X6    686   CIR1A_HUMAN Cirhin OS=Homo sapiens (Human). G...7551e-45     177     24     43GO:0005730; C:nucleolus; IDA:UniProtKB.
5Q00808    1356   HETE1_PODAS Vegetative incompatibility protei...2620.0001     49.7     24     39
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
6Q5BE22    452   PRP46_EMENI Pre-mRNA-splicing factor prp46 OS...1190.82     36.6     24     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
7Q4WT34    453   PRP46_ASPFU Pre-mRNA-splicing factor prp46 OS...1240.61     37     23     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
8P49695    742   PKWA_THECU Probable serine/threonine-protein ...2420.13     39.3     21     40
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
9Q6P5M2    305   WDR61_DANRE WD repeat-containing protein 61 O...1077.2     33.5     22     36GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
10Q86Y33    519   CD20B_HUMAN Cell division cycle protein 20 ho...2200.0000009     55.8     25     37
11Q58D20    485   NLE1_BOVIN Notchless protein homolog 1 OS=Bos...1019.3     33.1     23     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
12Q8YTC2    1258   Y2800_NOSS1 Uncharacterized WD repeat-contain...2186     34.3     22     39
GO:0043531; F:ADP binding; IEA:InterPro.
GO:0006952; P:defense response; IEA:InterPro.
13Q6PBD6    305   WDR61_XENTR WD repeat-containing protein 61 O...1076.2     33.5     22     36GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
14Q8YRI1    1526   YY46_NOSS1 Uncharacterized WD repeat-containi...3255.1     34.3     20     39
15Q8VEJ4    485   NLE1_MOUSE Notchless protein homolog 1 OS=Mus...3010.000005     53.5     25     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0001826; P:inner cell mass cell differentiation; IMP:MGI.::GO:0007219; P:Notch signaling pathway; IDA:MGI.
16Q5RFF8    485   NLE1_PONAB Notchless protein homolog 1 OS=Pon...1011.4     35.8     26     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
17Q9NVX2    485   NLE1_HUMAN Notchless protein homolog 1 OS=Hom...1011.4     35.8     26     44GO:0005730; C:nucleolus; IDA:HPA.
18O13615    473   PRP46_SCHPO Pre-mRNA-splicing factor prp5 OS=...662.7     35     29     41GO:0005681; C:spliceosomal complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IMP:PomBase.
19Q6GMD2    305   WDR61_XENLA WD repeat-containing protein 61 O...2370.00003     50.4     23     42GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
20Q93847    395   YZLL_CAEEL Uncharacterized WD repeat-containi...3190.00004     50.4     19     42
21Q54S79    942   WDR3_DICDI WD repeat-containing protein 3 hom...1710.006     43.9     22     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
22P0CS48    473   PRP46_CRYNJ Pre-mRNA-splicing factor PRP46 OS...3130.0001     49.3     22     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
23O76734    579   TUP1_DICDI General transcriptional corepresso...1620.12     39.7     21     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
24Q4V7A0    305   WDR61_RAT WD repeat-containing protein 61 OS=...1700.0001     48.5     24     44GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
25P0CS49    473   PRP46_CRYNB Pre-mRNA-splicing factor PRP46 OS...3130.0001     48.9     22     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
26Q5RDY7    353   GBB5_PONAB Guanine nucleotide-binding protein...2040.0001     48.5     24     38
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
27Q5ZJH5    305   WDR61_CHICK WD repeat-containing protein 61 O...1700.0001     48.1     25     44GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
28Q23256    501   YH92_CAEEL Uncharacterized WD repeat-containi...2180.0001     48.9     23     41
29Q80ZD0    353   GBB5_TAMST Guanine nucleotide-binding protein...2040.0002     48.1     24     38
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
30Q9ERF3    305   WDR61_MOUSE WD repeat-containing protein 61 O...1700.0002     48.1     24     44GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
31Q9UTC7    462   YIDC_SCHPO Uncharacterized WD repeat-containi...3250.0002     48.5     20     38GO:0005829; C:cytosol; IDA:PomBase.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:PomBase.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
records
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