Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR316W-B
Length:
1755
Number of sequences:
5887
Description:
YDR316W-B YDR316W-B SGDID:S000007399, Chr IV from 1096064-1097368,1097370-1101332, Genome Release 64-1-1, transposable_element_gene, "Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q04214    1755   YM13B_YEAST Transposon Ty1-MR1 Gag-Pol polypr...17550     3264     91     95GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
32Q12490    1755   YB11B_YEAST Transposon Ty1-BL Gag-Pol polypro...17550     3253     91     94GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
33P25384    1770   YC21B_YEAST Transposon Ty2-C Gag-Pol polyprot...17910     2491     69     80GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
34P0CX64    1770   YG22B_YEAST Transposon Ty2-GR2 Gag-Pol polypr...17910     2489     69     80GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
35P0CX63    1770   YF21B_YEAST Transposon Ty2-F Gag-Pol polyprot...17910     2489     69     80GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
36Q12337    1770   YG21B_YEAST Transposon Ty2-GR1 Gag-Pol polypr...17910     2487     69     80GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
37P0C2J3    1770   YL21B_YEAST Transposon Ty2-LR1 Gag-Pol polypr...17910     2484     69     80GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
38Q12472    1770   YD21B_YEAST Transposon Ty2-DR1 Gag-Pol polypr...17920     2483     69     80GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
39Q12491    1770   YB21B_YEAST Transposon Ty2-B Gag-Pol polyprot...17910     2482     69     80GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
40Q03494    1770   YD22B_YEAST Transposon Ty2-DR2 Gag-Pol polypr...17910     2482     69     80GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
41Q12113    1770   YO21B_YEAST Transposon Ty2-OR1 Gag-Pol polypr...17910     2476     69     80GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
42Q12501    1770   YO22B_YEAST Transposon Ty2-OR2 Gag-Pol polypr...17910     2475     69     80GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
43Q07791    1770   YD23B_YEAST Transposon Ty2-DR3 Gag-Pol polypr...17910     2472     69     80GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
44O13527    1196   YA11B_YEAST Truncated transposon Ty1-A Gag-Po...11560     2344     98     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.
45P0C2J5    1598   YL22B_YEAST Transposon Ty2-LR2 Gag-Pol polypr...593e-26     122     95     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
46P0CX69    440   YM14A_YEAST Transposon Ty1-MR2 Gag polyprotei...4350     902     100     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
47P0CX68    440   YL11A_YEAST Transposon Ty1-LR1 Gag polyprotei...4350     902     100     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
48P0CX67    440   YG13A_YEAST Transposon Ty1-GR3 Gag polyprotei...4350     902     100     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
49P0CX66    440   YE12A_YEAST Transposon Ty1-ER2 Gag polyprotei...4350     902     100     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
50P0CX65    440   YD14A_YEAST Transposon Ty1-DR5 Gag polyprotei...4350     902     100     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
51Q03856    440   YD11A_YEAST Transposon Ty1-DR1 Gag polyprotei...4350     902     100     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
52P0CX60    440   YP13A_YEAST Transposon Ty1-PR2 Gag polyprotei...4350     899     99     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
53P0CX59    440   YO12A_YEAST Transposon Ty1-OR Gag polyprotein...4350     899     99     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
54Q12217    440   YB12A_YEAST Transposon Ty1-BR Gag polyprotein...4350     898     99     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
55Q04706    440   YM11A_YEAST Transposon Ty1-ML1 Gag polyprotei...4350     896     99     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
56Q12441    440   YD12A_YEAST Transposon Ty1-DR3 Gag polyprotei...4350     896     99     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
57Q12485    440   YG12A_YEAST Transposon Ty1-GR2 Gag polyprotei...4350     895     99     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
58Q92392    440   YO11A_YEAST Transposon Ty1-OL Gag polyprotein...4350     886     98     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
59P0C2I8    440   YL14A_YEAST Transposon Ty1-LR4 Gag polyprotei...4350     886     98     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
60Q6Q5H1    440   YP14A_YEAST Transposon Ty1-PR3 Gag polyprotei...4350     884     98     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
61O74302    440   YD13A_YEAST Transposon Ty1-DR4 Gag polyprotei...4350     884     98     99GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 111 31 - 60
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::