Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR312W
Length:
453
Number of sequences:
5887
Description:
YDR312W SSF2 SGDID:S000002720, Chr IV from 1087581-1088942, Genome Release 64-1-1, Verified ORF, "Protein required for ribosomal large subunit maturation, functionally redundant with Ssf1p; member of the Brix family"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q12153    453   SSF2_YEAST Ribosome biogenesis protein SSF2 O...4530     923     100     100GO:0005730; C:nucleolus; IDA:SGD.
GO:0019843; F:rRNA binding; IPI:SGD.
GO:0000747; P:conjugation with cellular fusion; IGI:SGD.::GO:0000027; P:ribosomal large subunit assembly; IMP:SGD.
2P38789    453   SSF1_YEAST Ribosome biogenesis protein SSF1 O...4530     797     94     96GO:0005730; C:nucleolus; IDA:SGD.
GO:0019843; F:rRNA binding; IPI:SGD.
GO:0000747; P:conjugation with cellular fusion; IGI:SGD.::GO:0008361; P:regulation of cell size; IMP:SGD.::GO:0000027; P:ribosomal large subunit assembly; IMP:SGD.
3O14206    389   YDD3_SCHPO Brix domain-containing protein C1B...4273e-85     273     38     59GO:0005730; C:nucleolus; IDA:PomBase.
GO:0019843; F:rRNA binding; ISS:PomBase.
GO:0000027; P:ribosomal large subunit assembly; ISS:PomBase.
4Q91YU8    470   SSF1_MOUSE Suppressor of SWI4 1 homolog OS=Mu...4631e-68     232     34     54GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
5Q9NQ55    473   SSF1_HUMAN Suppressor of SWI4 1 homolog OS=Ho...4162e-61     213     35     54GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005634; C:nucleus; IDA:MGI.
GO:0008380; P:RNA splicing; TAS:ProtInc.
6Q5REM3    473   SSF1_PONAB Suppressor of SWI4 1 homolog OS=Po...4162e-60     210     34     54GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
7Q54N44    426   PPAN_DICDI Peter Pan-like protein OS=Dictyost...3691e-56     199     34     57
8Q9ASU7    345   PPAN_ARATH Peter Pan-like protein OS=Arabidop...3564e-49     176     33     55
9Q9VDE5    460   PPAN_DROME Protein Peter pan OS=Drosophila me...3545e-47     173     31     53
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007444; P:imaginal disc development; IMP:UniProtKB.::GO:0002164; P:larval development; IMP:UniProtKB.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.
10Q6IQU6    330   RPF1_DANRE Ribosome production factor 1 OS=Da...482.1     34.3     38     52GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
11Q6FNN7    288   IMP4_CANGA U3 small nucleolar ribonucleoprote...1360.18     37.4     27     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
12Q9HGL6    295   BRX1_SCHPO Ribosome biogenesis protein brx1 O...731.4     34.7     25     49GO:0032153; C:cell division site; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.
GO:0003723; F:RNA binding; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
13Q5RJS9    345   RPF1_RAT Ribosome production factor 1 OS=Ratt...363.9     33.5     42     58GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
14Q7TND5    349   RPF1_MOUSE Ribosome production factor 1 OS=Mu...481.6     34.7     38     52GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
15Q9H9Y2    349   RPF1_HUMAN Ribosome production factor 1 OS=Ho...1132.2     34.3     27     42GO:0005730; C:nucleolus; IDA:UniProtKB.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
16Q5R631    349   RPF1_PONAB Ribosome production factor 1 OS=Po...1131.9     34.3     27     42GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
17Q8AVP1    343   RPF1_XENLA Ribosome production factor 1 OS=Xe...1132.7     33.9     24     42GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
18Q6DJS0    819   N4BP1_XENTR NEDD4-binding protein 1 OS=Xenopu...602.4     34.3     30     47GO:0005730; C:nucleolus; ISS:UniProtKB.::GO:0016605; C:PML body; ISS:UniProtKB.
GO:0032435; P:negative regulation of proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0031397; P:negative regulation of protein ubiquitination; ISS:UniProtKB.
19O88978    473   TILB_MOUSE Protein TILB homolog OS=Mus muscul...862.8     33.9     30     50GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0005737; C:cytoplasm; IDA:BHF-UCL.
GO:0000240; P:diplotene; IEP:BHF-UCL.::GO:0008584; P:male gonad development; IEP:BHF-UCL.::GO:0000239; P:pachytene; IEP:BHF-UCL.
20Q96P66    508   GP101_HUMAN Probable G-protein coupled recept...673.4     33.9     30     60GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0004930; F:G-protein coupled receptor activity; IEA:UniProtKB-KW.
21Q9VKB4    394   RPF1_DROME Probable ribosome production facto...534     33.5     36     53GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
22Q6DN52    191   CBPL_DICDI Calcium-binding protein L OS=Dicty...1224.4     32.7     25     47
GO:0005509; F:calcium ion binding; ISS:dictyBase.
23Q4QQT6    352   BRX1_RAT Ribosome biogenesis protein BRX1 hom...796.5     32.7     33     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
24Q8TDN6    353   BRX1_HUMAN Ribosome biogenesis protein BRX1 h...797.8     32.3     33     44GO:0005730; C:nucleolus; IDA:HPA.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
25Q7ZXG4    848   N4BP1_XENLA NEDD4-binding protein 1 OS=Xenopu...548.7     32.7     28     48GO:0005730; C:nucleolus; ISS:UniProtKB.::GO:0016605; C:PML body; ISS:UniProtKB.
GO:0032435; P:negative regulation of proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0031397; P:negative regulation of protein ubiquitination; ISS:UniProtKB.
26Q3SZZ0    353   BRX1_BOVIN Ribosome biogenesis protein BRX1 h...799.1     32.3     33     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
27Q7RTP6    2002   MICA3_HUMAN Protein-methionine sulfoxide oxid...389.1     32.7     42     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; ISS:UniProtKB.::GO:0071949; F:FAD binding; ISS:UniProtKB.::GO:0016709; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030042; P:actin filament depolymerization; ISS:UniProtKB.::GO:0006887; P:exocytosis; IEA:UniProtKB-KW.
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