Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR261W-A
Length:
438
Number of sequences:
5887
Description:
YDR261W-A YDR261W-A SGDID:S000007396, Chr IV from 981462-982778, Genome Release 64-1-1, transposable_element_gene, "Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31P0CX66    440   YE12A_YEAST Transposon Ty1-ER2 Gag polyprotei...4393e-143     423     51     67GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
32P0CX65    440   YD14A_YEAST Transposon Ty1-DR5 Gag polyprotei...4393e-143     423     51     67GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
33P0C2I8    440   YL14A_YEAST Transposon Ty1-LR4 Gag polyprotei...4395e-143     423     51     67GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
34P0CX60    440   YP13A_YEAST Transposon Ty1-PR2 Gag polyprotei...4393e-142     421     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
35P0CX59    440   YO12A_YEAST Transposon Ty1-OR Gag polyprotein...4393e-142     421     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
36Q04706    440   YM11A_YEAST Transposon Ty1-ML1 Gag polyprotei...4395e-142     420     50     67GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
37P0CX76    440   YM12A_YEAST Transposon Ty1-ML2 Gag polyprotei...4399e-142     419     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
38P0CX75    440   YL13A_YEAST Transposon Ty1-LR3 Gag polyprotei...4399e-142     419     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
39P0CX74    440   YJ11A_YEAST Transposon Ty1-JR1 Gag polyprotei...4399e-142     419     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
40Q12217    440   YB12A_YEAST Transposon Ty1-BR Gag polyprotein...4392e-141     419     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
41Q92392    440   YO11A_YEAST Transposon Ty1-OL Gag polyprotein...4391e-140     417     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
42P08405    440   TY1A_YEASX Transposon TyH3 Gag polyprotein OS...4392e-140     416     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
43P0CX73    440   YP11A_YEAST Transposon Ty1-PL Gag polyprotein...4393e-140     416     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
44P0CX72    440   YL12A_YEAST Transposon Ty1-LR2 Gag polyprotei...4393e-140     416     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
45P0CX71    440   YE11A_YEAST Transposon Ty1-ER1 Gag polyprotei...4393e-140     416     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
46P0CX70    440   YD15A_YEAST Transposon Ty1-DR6 Gag polyprotei...4393e-140     416     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
47O74302    440   YD13A_YEAST Transposon Ty1-DR4 Gag polyprotei...4397e-140     415     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
48Q6Q5H1    440   YP14A_YEAST Transposon Ty1-PR3 Gag polyprotei...4396e-139     412     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
49Q12470    440   YN12A_YEAST Transposon Ty1-NL2 Gag polyprotei...4394e-137     407     49     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
50P0C2I4    478   YH11A_YEAST Transposon Ty1-H Gag polyprotein ...4779e-137     408     47     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
51Q12085    440   YG11A_YEAST Transposon Ty1-GR1 Gag polyprotei...4396e-136     404     49     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
52P47099    440   YJ12A_YEAST Transposon Ty1-JR2 Gag polyprotei...4391e-135     404     49     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
53P0CX58    440   YP12A_YEAST Transposon Ty1-PR1 Gag polyprotei...4393e-134     400     49     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
54P0CX57    440   YA11A_YEAST Transposon Ty1-A Gag polyprotein ...4393e-134     400     49     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
55Q12391    440   YN11A_YEAST Transposon Ty1-NL1 Gag polyprotei...4391e-129     388     48     64GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
56Q03855    1755   YD11B_YEAST Transposon Ty1-DR1 Gag-Pol polypr...4352e-129     416     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
57Q99231    1755   YD12B_YEAST Transposon Ty1-DR3 Gag-Pol polypr...4352e-129     416     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
58Q12269    1755   YG12B_YEAST Transposon Ty1-GR2 Gag-Pol polypr...4352e-129     416     50     67GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
59Q03619    1755   YE12B_YEAST Transposon Ty1-ER2 Gag-Pol polypr...4353e-129     415     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
60Q04670    1755   YM14B_YEAST Transposon Ty1-MR2 Gag-Pol polypr...4353e-129     415     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
61P0C2I2    1755   YD14B_YEAST Transposon Ty1-DR5 Gag-Pol polypr...4353e-129     415     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
records
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