Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR255C
Length:
421
Number of sequences:
5887
Description:
YDR255C RMD5 SGDID:S000002663, Chr IV from 967822-966557, Genome Release 64-1-1, reverse complement, Verified ORF, "Conserved protein that has an E3-like ubiquitin ligase activity necessary for polyubiquitination and degradation of the gluconeogenic enzyme fructose-1,6-bisphosphatase; also required for sporulation; has a degenerate RING finger domain"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q12508    421   RMD5_YEAST Sporulation protein RMD5 OS=Saccha...4210     867     100     100GO:0005829; C:cytosol; IDA:SGD.::GO:0034657; C:GID complex; IDA:SGD.
GO:0004842; F:ubiquitin-protein ligase activity; IMP:SGD.
GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0045721; P:negative regulation of gluconeogenesis; IMP:SGD.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:SGD.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IMP:SGD.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.
2O59668    398   YB83_SCHPO LisH domain-containing protein C29...1461e-30     125     40     62GO:0005829; C:cytosol; IDA:PomBase.::GO:0034657; C:GID complex; ISS:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0033554; P:cellular response to stress; IEP:PomBase.::GO:0045721; P:negative regulation of gluconeogenesis; ISS:PomBase.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IC:PomBase.
3Q80YQ8    391   RMD5A_MOUSE Protein RMD5 homolog A OS=Mus mus...4185e-25     108     26     45
4Q9H871    391   RMD5A_HUMAN Protein RMD5 homolog A OS=Homo sa...4185e-25     108     26     45
5Q91YQ7    393   RMD5B_MOUSE Protein RMD5 homolog B OS=Mus mus...2472e-23     103     28     49
6Q96G75    393   RMD5B_HUMAN Protein RMD5 homolog B OS=Homo sa...2504e-23     103     29     50
7Q640V2    391   RMD5A_XENTR Protein RMD5 homolog A OS=Xenopus...2567e-23     102     28     48
8Q6GLP4    391   RMD5A_XENLA Protein RMD5 homolog A OS=Xenopus...4187e-23     102     25     45
9A1CZJ5    406   FYV10_NEOFI Protein fyv10 OS=181) (Aspergillu...1480.25     37     17     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
10Q7SXR3    396   MAEA_DANRE Macrophage erythroblast attacher O...1850.5     36.2     24     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0016363; C:nuclear matrix; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0043249; P:erythrocyte maturation; IEA:UniProtKB-KW.
11Q4WTQ4    411   FYV10_ASPFU Protein fyv10 OS=A1100) (Aspergil...940.59     35.8     23     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
12Q5RKJ1    396   MAEA_RAT Macrophage erythroblast attacher OS=...1841     35     23     41GO:0016363; C:nuclear matrix; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0043249; P:erythrocyte maturation; IEA:UniProtKB-KW.
13Q4VC33    396   MAEA_MOUSE Macrophage erythroblast attacher O...1841     35     23     41GO:0016363; C:nuclear matrix; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IDA:MGI.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007010; P:cytoskeleton organization; IMP:MGI.::GO:0048822; P:enucleate erythrocyte development; IMP:MGI.::GO:0043249; P:erythrocyte maturation; IEA:UniProtKB-KW.
14Q3MHJ2    434   MAEA_BOVIN Macrophage erythroblast attacher O...2081.4     34.7     24     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0016363; C:nuclear matrix; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0043249; P:erythrocyte maturation; IEA:UniProtKB-KW.
15Q0CA25    406   FYV10_ASPTN Protein fyv10 OS=Aspergillus terr...961.6     34.7     24     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
16Q6GR10    396   MAEA_XENLA Macrophage erythroblast attacher O...1861.7     34.7     23     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0016363; C:nuclear matrix; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0043249; P:erythrocyte maturation; IEA:UniProtKB-KW.
17A1C9R2    406   FYV10_ASPCL Protein fyv10 OS=3887 / NRRL 1). ...902.1     34.3     24     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
18Q8CH72    655   TRI32_MOUSE E3 ubiquitin-protein ligase TRIM3...622.3     34.3     29     47GO:0005737; C:cytoplasm; ISS:BHF-UCL.::GO:0005634; C:nucleus; IDA:MGI.
GO:0017022; F:myosin binding; IPI:MGI.::GO:0043621; F:protein self-association; ISS:BHF-UCL.::GO:0003723; F:RNA binding; IDA:BHF-UCL.::GO:0031369; F:translation initiation factor binding; IPI:MGI.::GO:0043130; F:ubiquitin binding; ISS:BHF-UCL.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:BHF-UCL.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0045444; P:fat cell differentiation; IEP:BHF-UCL.::GO:0043066; P:negative regulation of apoptotic process; ISS:BHF-UCL.::GO:0048147; P:negative regulation of fibroblast proliferation; IEP:BHF-UCL.::GO:0045787; P:positive regulation of cell cycle; ISS:BHF-UCL.::GO:0030307; P:positive regulation of cell growth; ISS:BHF-UCL.::GO:0030335; P:positive regulation of cell migration; ISS:BHF-UCL.::GO:0050769; P:positive regulation of neurogenesis; IDA:BHF-UCL.::GO:0045666; P:positive regulation of neuron differentiation; IDA:BHF-UCL.::GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; IDA:BHF-UCL.::GO:0045732; P:positive regulation of protein catabolic process; IDA:BHF-UCL.::GO:0045862; P:positive regulation of proteolysis; ISS:BHF-UCL.::GO:0000209; P:protein polyubiquitination; ISS:BHF-UCL.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; ISS:BHF-UCL.::GO:0034612; P:response to tumor necrosis factor; IDA:BHF-UCL.::GO:0009411; P:response to UV; IDA:BHF-UCL.
19Q1DTI6    402   FYV10_COCIM Protein FYV10 OS=Coccidioides imm...972.4     33.9     25     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
20Q13049    653   TRI32_HUMAN E3 ubiquitin-protein ligase TRIM3...622.4     34.3     29     47GO:0005634; C:nucleus; ISS:BHF-UCL.
GO:0017022; F:myosin binding; ISS:BHF-UCL.::GO:0043621; F:protein self-association; IDA:UniProtKB.::GO:0003723; F:RNA binding; ISS:BHF-UCL.::GO:0030957; F:Tat protein binding; TAS:BHF-UCL.::GO:0003713; F:transcription coactivator activity; TAS:ProtInc.::GO:0031369; F:translation initiation factor binding; ISS:BHF-UCL.::GO:0043130; F:ubiquitin binding; IDA:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0045444; P:fat cell differentiation; ISS:BHF-UCL.::GO:0045087; P:innate immune response; TAS:BHF-UCL.::GO:0043066; P:negative regulation of apoptotic process; IDA:BHF-UCL.::GO:0048147; P:negative regulation of fibroblast proliferation; ISS:BHF-UCL.::GO:0045787; P:positive regulation of cell cycle; IDA:BHF-UCL.::GO:0030307; P:positive regulation of cell growth; IDA:BHF-UCL.::GO:0030335; P:positive regulation of cell migration; IDA:BHF-UCL.::GO:0050769; P:positive regulation of neurogenesis; ISS:BHF-UCL.::GO:0045666; P:positive regulation of neuron differentiation; ISS:BHF-UCL.::GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; ISS:BHF-UCL.::GO:0045732; P:positive regulation of protein catabolic process; ISS:BHF-UCL.::GO:0045862; P:positive regulation of proteolysis; IDA:BHF-UCL.::GO:0000209; P:protein polyubiquitination; IDA:BHF-UCL.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IMP:UniProtKB.::GO:0034612; P:response to tumor necrosis factor; ISS:BHF-UCL.::GO:0009411; P:response to UV; ISS:BHF-UCL.
21Q5R532    396   MAEA_PONAB Macrophage erythroblast attacher O...1842.6     33.9     23     41GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0016363; C:nuclear matrix; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0043249; P:erythrocyte maturation; IEA:UniProtKB-KW.
22Q4R9A8    396   MAEA_MACFA Macrophage erythroblast attacher O...1842.6     33.9     23     41GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0016363; C:nuclear matrix; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0043249; P:erythrocyte maturation; IEA:UniProtKB-KW.
23Q7L5Y9    396   MAEA_HUMAN Macrophage erythroblast attacher O...1842.6     33.9     23     41GO:0005826; C:actomyosin contractile ring; IDA:UniProtKB.::GO:0005887; C:integral to plasma membrane; IDA:UniProtKB.::GO:0005624; C:membrane fraction; IDA:UniProtKB.::GO:0016363; C:nuclear matrix; IDA:UniProtKB.::GO:0005819; C:spindle; IDA:UniProtKB.
GO:0003779; F:actin binding; IDA:UniProtKB.
GO:0007155; P:cell adhesion; IDA:UniProtKB.::GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0043249; P:erythrocyte maturation; IEA:UniProtKB-KW.::GO:0033033; P:negative regulation of myeloid cell apoptotic process; IDA:UniProtKB.::GO:0007346; P:regulation of mitotic cell cycle; NAS:UniProtKB.
24Q5F398    396   MAEA_CHICK Macrophage erythroblast attacher O...1853.2     33.5     24     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0016363; C:nuclear matrix; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0043249; P:erythrocyte maturation; IEA:UniProtKB-KW.
25Q5L1E6    355   MTNA_GEOKA Methylthioribose-1-phosphate isome...893.4     33.5     27     48
GO:0046523; F:S-methyl-5-thioribose-1-phosphate isomerase activity; IEA:EC.
GO:0009086; P:methionine biosynthetic process; IEA:UniProtKB-KW.
26Q04174    516   SMP3_YEAST GPI mannosyltransferase 4 OS=Sacch...1873.4     33.5     24     42GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031227; C:intrinsic to endoplasmic reticulum membrane; IEA:InterPro.
GO:0004584; F:dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity; IMP:SGD.
GO:0006506; P:GPI anchor biosynthetic process; IMP:SGD.::GO:0006276; P:plasmid maintenance; IMP:SGD.
27Q8TEK3    1739   DOT1L_HUMAN Histone-lysine N-methyltransferas...1474.2     33.5     22     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0018024; F:histone-lysine N-methyltransferase activity; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008134; F:transcription factor binding; IPI:UniProtKB.
GO:0046425; P:regulation of JAK-STAT cascade; IDA:UniProtKB.::GO:2000677; P:regulation of transcription regulatory region DNA binding; IMP:UniProtKB.
28Q11072    218   YT44_CAEEL Uncharacterized RING finger protei...604.3     32.7     27     48
GO:0008270; F:zinc ion binding; IEA:InterPro.
29Q8NDW8    1320   TT21A_HUMAN Tetratricopeptide repeat protein ...1405.3     33.1     24     46
GO:0005488; F:binding; IEA:InterPro.
30A2R9P6    406   FYV10_ASPNC Protein fyv10 OS=Aspergillus nige...905.8     32.7     24     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
31O17514    773   MES2_CAEEL Histone-lysine N-methyltransferase...768.7     32.3     32     47GO:0000786; C:nucleosome; IDA:WormBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0018024; F:histone-lysine N-methyltransferase activity; IEA:EC.
GO:0042078; P:germ-line stem cell division; IMP:WormBase.::GO:0070734; P:histone H3-K27 methylation; IMP:WormBase.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:WormBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
records
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