Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR238C
Length:
973
Number of sequences:
5887
Description:
YDR238C SEC26 SGDID:S000002646, Chr IV from 940816-937895, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential beta-coat protein of the COPI coatomer, involved in ER-to-Golgi protein trafficking and maintenance of normal ER morphology; shares 43% sequence identity with mammalian beta-coat protein (beta-COP)"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P41810    973   COPB_YEAST Coatomer subunit beta OS=Saccharom...9730     1994     100     100GO:0030126; C:COPI vesicle coat; IGI:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.
2Q6FM46    972   COPB_CANGA Coatomer subunit beta OS=NRRL Y-65...9730     1453     73     85GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
3Q9JIF7    953   COPB_MOUSE Coatomer subunit beta OS=Mus muscu...9700     787     43     64GO:0005793; C:endoplasmic reticulum-Golgi intermediate compartment; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
4Q5R922    953   COPB_PONAB Coatomer subunit beta OS=Pongo abe...9700     787     43     64GO:0030126; C:COPI vesicle coat; IEA:InterPro.::GO:0005793; C:endoplasmic reticulum-Golgi intermediate compartment; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
5P53618    953   COPB_HUMAN Coatomer subunit beta OS=Homo sapi...9700     785     43     64GO:0030126; C:COPI vesicle coat; ISS:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005793; C:endoplasmic reticulum-Golgi intermediate compartment; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0048205; P:COPI coating of Golgi vesicle; TAS:Reactome.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0006891; P:intra-Golgi vesicle-mediated transport; ISS:UniProtKB.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; TAS:Reactome.
6D2SW95    953   COPB_PIG Coatomer subunit beta OS=Sus scrofa ...9700     785     43     64GO:0030126; C:COPI vesicle coat; IEA:InterPro.::GO:0005793; C:endoplasmic reticulum-Golgi intermediate compartment; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
7P23514    953   COPB_RAT Coatomer subunit beta OS=Rattus norv...9700     783     43     64GO:0030126; C:COPI vesicle coat; IDA:UniProtKB.::GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-KW.::GO:0005793; C:endoplasmic reticulum-Golgi intermediate compartment; IEA:UniProtKB-SubCell.::GO:0005792; C:microsome; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006891; P:intra-Golgi vesicle-mediated transport; IDA:UniProtKB.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; TAS:UniProtKB.
8A0JN39    953   COPB_BOVIN Coatomer subunit beta OS=Bos tauru...9700     783     43     64GO:0030126; C:COPI vesicle coat; IEA:InterPro.::GO:0005793; C:endoplasmic reticulum-Golgi intermediate compartment; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
9Q5ZIA5    953   COPB_CHICK Coatomer subunit beta OS=Gallus ga...9700     778     43     64GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
10Q66HV4    953   COPB_DANRE Coatomer subunit beta OS=Danio rer...9750     770     42     63GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0030903; P:notochord development; IMP:ZFIN.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
11Q9UUF7    940   COPB_SCHPO Coatomer subunit beta OS=Schizosac...9610     750     44     63GO:0030126; C:COPI vesicle coat; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0030134; C:ER to Golgi transport vesicle; IC:PomBase.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006888; P:ER to Golgi vesicle-mediated transport; ISS:PomBase.::GO:0006886; P:intracellular protein transport; IC:PomBase.
12P45437    964   COPB_DROME Coatomer subunit beta OS=Drosophil...9870     741     40     63GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0000902; P:cell morphogenesis; IMP:FlyBase.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006911; P:phagocytosis, engulfment; IMP:FlyBase.::GO:0010883; P:regulation of lipid storage; IDA:FlyBase.
13Q29G21    965   COPB_DROPS Coatomer subunit beta OS=Drosophil...9900     739     40     63GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
14Q9SV20    948   COPB2_ARATH Coatomer subunit beta-2 OS=Arabid...9540     680     41     61GO:0030126; C:COPI vesicle coat; IEA:InterPro.::GO:0005829; C:cytosol; IDA:TAIR.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
15Q9SV21    948   COPB1_ARATH Coatomer subunit beta-1 OS=Arabid...9560     677     40     61GO:0030126; C:COPI vesicle coat; IEA:InterPro.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0009506; C:plasmodesma; IDA:TAIR.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
16Q53PC7    953   COPB1_ORYSJ Coatomer subunit beta-1 OS=Oryza ...9710     660     39     61GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
17Q0JNK5    950   COPB2_ORYSJ Coatomer subunit beta-2 OS=Oryza ...9490     652     40     61GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
18Q23924    912   COPB_DICDI Coatomer subunit beta OS=Dictyoste...9440     590     37     59GO:0030126; C:COPI vesicle coat; IEA:InterPro.::GO:0048471; C:perinuclear region of cytoplasm; IDA:dictyBase.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
19Q9NFU6    982   COPB_TRYBB Coatomer subunit beta OS=Trypanoso...9781e-144     462     30     53GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
20Q9U4N3    1103   COPB_TOXGO Coatomer subunit beta OS=Toxoplasm...3185e-44     177     32     52GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
21Q9DBG3    937   AP2B1_MOUSE AP-2 complex subunit beta OS=Mus ...4827e-17     89.7     23     42GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
22P62944    937   AP2B1_RAT AP-2 complex subunit beta OS=Rattus...4828e-17     89.4     23     42GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0005802; C:trans-Golgi network; IDA:RGD.
GO:0030276; F:clathrin binding; IDA:BHF-UCL.::GO:0032403; F:protein complex binding; IMP:RGD.::GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0048268; P:clathrin coat assembly; IDA:BHF-UCL.::GO:0006886; P:intracellular protein transport; IEA:InterPro.
23P63010    937   AP2B1_HUMAN AP-2 complex subunit beta OS=Homo...4828e-17     89.4     23     42GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0030666; C:endocytic vesicle membrane; TAS:Reactome.::GO:0005886; C:plasma membrane; TAS:Reactome.
GO:0030276; F:clathrin binding; IPI:UniProtKB.::GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0007411; P:axon guidance; TAS:Reactome.::GO:0007173; P:epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0042059; P:negative regulation of epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0048011; P:nerve growth factor receptor signaling pathway; TAS:Reactome.::GO:0050690; P:regulation of defense response to virus by virus; TAS:Reactome.::GO:0007268; P:synaptic transmission; TAS:Reactome.::GO:0016192; P:vesicle-mediated transport; IEA:InterPro.::GO:0016032; P:viral reproduction; TAS:Reactome.
24Q08DS7    951   AP1B1_BOVIN AP-1 complex subunit beta-1 OS=Bo...4701e-16     89     24     43GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0030665; C:clathrin coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.::GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006897; P:endocytosis; IEA:UniProtKB-KW.::GO:0006886; P:intracellular protein transport; IEA:InterPro.
25P63009    937   AP2B1_BOVIN AP-2 complex subunit beta OS=Bos ...4701e-16     89     24     43GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.::GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
26Q7YRF1    1091   AP3B1_CANFA AP-3 complex subunit beta-1 OS=Ca...5100.000000000000002     85.1     23     42GO:0030665; C:clathrin coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006897; P:endocytosis; IEA:UniProtKB-KW.
27Q9Z1T1    1105   AP3B1_MOUSE AP-3 complex subunit beta-1 OS=Mu...5100.000000000000002     84.7     23     42GO:0030665; C:clathrin coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.::GO:0005802; C:trans-Golgi network; TAS:MGI.
GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0048007; P:antigen processing and presentation, exogenous lipid antigen via MHC class Ib; IMP:MGI.::GO:0007596; P:blood coagulation; IMP:MGI.::GO:0006897; P:endocytosis; IEA:UniProtKB-KW.::GO:0051138; P:positive regulation of NK T cell differentiation; IMP:MGI.::GO:0006622; P:protein targeting to lysosome; IMP:MGI.::GO:0006829; P:zinc ion transport; TAS:BHF-UCL.
28Q54X82    942   AP1B_DICDI AP-1 complex subunit beta OS=Dicty...4810.000000000000003     84.3     24     44GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0030665; C:clathrin coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:dictyBase.::GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
29Q10567    949   AP1B1_HUMAN AP-1 complex subunit beta-1 OS=Ho...4430.000000000000005     83.6     24     43GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0030665; C:clathrin coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0000139; C:Golgi membrane; TAS:Reactome.::GO:0005765; C:lysosomal membrane; TAS:Reactome.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0016044; P:cellular membrane organization; TAS:Reactome.::GO:0006897; P:endocytosis; IEA:UniProtKB-KW.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006892; P:post-Golgi vesicle-mediated transport; TAS:Reactome.::GO:0050690; P:regulation of defense response to virus by virus; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
30O35643    943   AP1B1_MOUSE AP-1 complex subunit beta-1 OS=Mu...4420.000000000000006     83.2     24     43GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0030665; C:clathrin coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0005802; C:trans-Golgi network; TAS:MGI.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006897; P:endocytosis; IEA:UniProtKB-KW.::GO:0006886; P:intracellular protein transport; TAS:MGI.
31O00203    1094   AP3B1_HUMAN AP-3 complex subunit beta-1 OS=Ho...5170.000000000000007     83.2     23     42GO:0030665; C:clathrin coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; TAS:ProtInc.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0019903; F:protein phosphatase binding; IPI:UniProtKB.::GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006897; P:endocytosis; IEA:UniProtKB-KW.::GO:0032438; P:melanosome organization; IMP:UniProtKB.
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